Clone Information

BLAST Search Result

Clone Name	bart07e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_471943.1\| Oryza sativa (japonica cultivar-group), predic...	228	9e-57
2	emb\|AL606625.3\|OSJN00039 Oryza sativa genomic DNA, chromosome 4,...	228	9e-57
3	emb\|AL606589.3\|OSJN00021 Oryza sativa genomic DNA, chromosome 4,...	228	9e-57
4	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	228	9e-57
5	dbj\|AK099774.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	228	9e-57
6	dbj\|AK061686.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	228	9e-57
7	ref\|XM_471942.1\| Oryza sativa (japonica cultivar-group), predic...	212	5e-52
8	ref\|XM_471940.1\| Oryza sativa (japonica cultivar-group), predic...	155	1e-34
9	dbj\|AK104524.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	155	1e-34
10	dbj\|AK068652.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	155	1e-34
11	ref\|XM_471950.1\| Oryza sativa (japonica cultivar-group), predic...	117	2e-23
12	dbj\|AK103553.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	117	2e-23
13	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	52	0.001
14	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	52	0.001
15	gb\|CP000159.1\| Salinibacter ruber DSM 13855, complete genome	52	0.001
16	ref\|XM_469528.1\| Oryza sativa (japonica cultivar-group), mRNA	46	0.071
17	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	46	0.071
18	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.071
19	gb\|AC082645.13\|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033...	46	0.071
20	dbj\|AB180689.1\| Oryza sativa (japonica cultivar-group) OsGS1;3 m...	46	0.071
21	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	46	0.071
22	dbj\|AK099290.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.071
23	dbj\|AK063913.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.071
24	gb\|CP000285.1\| Chromohalobacter salexigens DSM 3043, complete ge...	42	1.1
25	gb\|CP000133.1\| Rhizobium etli CFN 42, complete genome	42	1.1
26	gb\|AE004681.1\| Pseudomonas aeruginosa PAO1, section 242 of 529 o...	42	1.1
27	dbj\|BA000012.4\| Mesorhizobium loti MAFF303099 DNA, complete genome	42	1.1
28	gb\|AF030301.1\|AF030301 Helianthus annuus auxin-induced protein (...	42	1.1
29	gb\|CP000152.1\| Burkholderia sp. 383 chromosome 2, complete sequence	40	4.4
30	ref\|NM_192811.1\| Oryza sativa (japonica cultivar-group), predic...	40	4.4
31	gb\|AC183539.2\| Pan troglodytes BAC clone CH251-340H7 from chromo...	40	4.4
32	gb\|AC137751.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	4.4
33	gb\|AC016204.12\| Homo sapiens chromosome 15, clone RP11-25C1, com...	40	4.4
34	gb\|CP000301.1\| Rhodopseudomonas palustris BisB18, complete genome	40	4.4
35	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	4.4
36	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	4.4
37	dbj\|AP003328.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	4.4
38	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	4.4
39	gb\|AC055876.16\| Homo sapiens chromosome 15, clone RP11-578F21, c...	40	4.4
40	gb\|AC091951.3\| Homo sapiens chromosome 5 clone RP11-404K5, compl...	40	4.4
41	dbj\|AK100460.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	4.4
42	gb\|AC156502.2\| Mus musculus BAC clone RP23-355N1 from 9, complet...	40	4.4
43	emb\|CT033793.10\| Mouse DNA sequence from clone RP23-21O10 on chr...	40	4.4
44	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	4.4
45	gb\|AC011767.12\| Homo sapiens chromosome 15, clone RP11-26F2, com...	40	4.4

>ref|XM_471943.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
           ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 41  tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 100

                                                                       
Query: 201 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 101 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 160

                                                                       
Query: 261 tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
           ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 161 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 220

                      
Query: 321 tcctcctcggc 331
           |||||||||||
Sbjct: 221 tcctcctcggc 231

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>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19,
             complete sequence
          Length = 145383

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                         
Query: 141   tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
             ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 13473 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 13532

                                                                         
Query: 201   ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
             ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 13533 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 13592

                                                                         
Query: 261   tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
             ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 13593 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 13652

                        
Query: 321   tcctcctcggc 331
             |||||||||||
Sbjct: 13653 tcctcctcggc 13663



 Score =  212 bits (107), Expect = 5e-52
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                        
Query: 137  cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 196
            ||||||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| 
Sbjct: 2393 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 2452

                                                                        
Query: 197  atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccan 256
            |||||||||||| |||| ||| ||||||||||| | |||||||| |||||||||||||| 
Sbjct: 2453 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 2512

                                                                        
Query: 257  gccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaac 316
            ||| ||||||||||||||||||| |||||| || || | ||||| ||||||||| |||||
Sbjct: 2513 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 2572

                           
Query: 317  gagatcctcctcggc 331
            |||  ||||||||||
Sbjct: 2573 gaggccctcctcggc 2587



 Score =  196 bits (99), Expect = 3e-47
 Identities = 167/191 (87%)
 Strand = Plus / Plus

                                                                         
Query: 141   tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
             ||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| ||||
Sbjct: 22187 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 22246

                                                                         
Query: 201   ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
             ||||||||||||| || |||||||||||| | |||||||| |||||||||||||| ||| 
Sbjct: 22247 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 22306

                                                                         
Query: 261   tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
             ||||||||||||||||||  |||||| || || | || || || || |||||||||||| 
Sbjct: 22307 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 22366

                        
Query: 321   tcctcctcggc 331
             |||||||||||
Sbjct: 22367 tcctcctcggc 22377



 Score =  117 bits (59), Expect = 2e-23
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                         
Query: 141   tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
             |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct: 99305 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 99364

                                                                         
Query: 201   ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
             | ||  | |||||   ||  ||||||||| | |||||||| |||||| ||| ||| ||| 
Sbjct: 99365 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 99424

                                                                        
Query: 261   tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgag 319
             ||||||| ||||||||| | |||||| || || |  |||| ||||||||||||||||||
Sbjct: 99425 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgag 99483

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>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
              complete sequence
          Length = 130521

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                          
Query: 141    tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
              ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 115825 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 115884

                                                                          
Query: 201    ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
              ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 115885 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 115944

                                                                          
Query: 261    tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
              ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 115945 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 116004

                         
Query: 321    tcctcctcggc 331
              |||||||||||
Sbjct: 116005 tcctcctcggc 116015



 Score =  212 bits (107), Expect = 5e-52
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                          
Query: 137    cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 196
              ||||||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| 
Sbjct: 104745 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 104804

                                                                          
Query: 197    atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccan 256
              |||||||||||| |||| ||| ||||||||||| | |||||||| |||||||||||||| 
Sbjct: 104805 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 104864

                                                                          
Query: 257    gccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaac 316
              ||| ||||||||||||||||||| |||||| || || | ||||| ||||||||| |||||
Sbjct: 104865 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 104924

                             
Query: 317    gagatcctcctcggc 331
              |||  ||||||||||
Sbjct: 104925 gaggccctcctcggc 104939



 Score =  196 bits (99), Expect = 3e-47
 Identities = 167/191 (87%)
 Strand = Plus / Plus

                                                                          
Query: 141    tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
              ||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| ||||
Sbjct: 124539 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 124598

                                                                          
Query: 201    ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
              ||||||||||||| || |||||||||||| | |||||||| |||||||||||||| ||| 
Sbjct: 124599 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 124658

                                                                          
Query: 261    tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
              ||||||||||||||||||  |||||| || || | || || || || |||||||||||| 
Sbjct: 124659 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 124718

                         
Query: 321    tcctcctcggc 331
              |||||||||||
Sbjct: 124719 tcctcctcggc 124729



 Score =  155 bits (78), Expect = 1e-34
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                         
Query: 130   ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 189
             |||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 88935 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 88994

                                                                         
Query: 190   catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 249
             |||||| |||| | |   || ||  ||||||||||||||| | |||||||| ||||||||
Sbjct: 88995 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 89054

                                                                         
Query: 250   ccaccangccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgca 309
             || ||| ||| ||||||||||||||||  |  ||||| || || |  |||| || || ||
Sbjct: 89055 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 89114

                                   
Query: 310   caccaacgagatcctcctcggc 331
             |||||||||| |||||||||||
Sbjct: 89115 caccaacgaggtcctcctcggc 89136



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 89/105 (84%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                         
Query: 139   cgtgaagctgggctcccaggggatggaggtctcggcgca--gggcctcggctgcatgggt 196
             ||||||||||||||| ||||||  |||  ||||  ||||  |||||| ||||||||||| 
Sbjct: 86511 cgtgaagctgggctcgcaggggccggatatctcaacgcagtgggcctgggctgcatgggc 86570

                                                          
Query: 197   atgtccgccttctacggcccgcccaa-gccggagccagacatggt 240
             |||||||| |||||||||||| |||| ||||||| | ||||||||
Sbjct: 86571 atgtccgctttctacggcccgtccaatgccggaggccgacatggt 86615

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                            
Query: 141      tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
                ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 15929260 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 15929319

                                                                            
Query: 201      ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
                ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 15929320 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 15929379

                                                                            
Query: 261      tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
                ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 15929380 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 15929439

                           
Query: 321      tcctcctcggc 331
                |||||||||||
Sbjct: 15929440 tcctcctcggc 15929450



 Score =  212 bits (107), Expect = 5e-52
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                            
Query: 137      cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 196
                ||||||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| 
Sbjct: 15918180 cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 15918239

                                                                            
Query: 197      atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccan 256
                |||||||||||| |||| ||| ||||||||||| | |||||||| |||||||||||||| 
Sbjct: 15918240 atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 15918299

                                                                            
Query: 257      gccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaac 316
                ||| ||||||||||||||||||| |||||| || || | ||||| ||||||||| |||||
Sbjct: 15918300 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 15918359

                               
Query: 317      gagatcctcctcggc 331
                |||  ||||||||||
Sbjct: 15918360 gaggccctcctcggc 15918374



 Score =  196 bits (99), Expect = 3e-47
 Identities = 167/191 (87%)
 Strand = Plus / Plus

                                                                            
Query: 141      tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
                ||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| ||||
Sbjct: 15937974 tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggctgcatgggcatgt 15938033

                                                                            
Query: 201      ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
                ||||||||||||| || |||||||||||| | |||||||| |||||||||||||| ||| 
Sbjct: 15938034 ccgccttctacgggccacccaagccggaggccgacatggttgcgctcatccaccacgccg 15938093

                                                                            
Query: 261      tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
                ||||||||||||||||||  |||||| || || | || || || || |||||||||||| 
Sbjct: 15938094 tcgccgccggcgtcacccacctcgacacctccgacatgtacggcccccacaccaacgagc 15938153

                           
Query: 321      tcctcctcggc 331
                |||||||||||
Sbjct: 15938154 tcctcctcggc 15938164



 Score =  155 bits (78), Expect = 1e-34
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                            
Query: 130      ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 189
                |||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 15902370 ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 15902429

                                                                            
Query: 190      catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 249
                |||||| |||| | |   || ||  ||||||||||||||| | |||||||| ||||||||
Sbjct: 15902430 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 15902489

                                                                            
Query: 250      ccaccangccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgca 309
                || ||| ||| ||||||||||||||||  |  ||||| || || |  |||| || || ||
Sbjct: 15902490 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 15902549

                                      
Query: 310      caccaacgagatcctcctcggc 331
                |||||||||| |||||||||||
Sbjct: 15902550 caccaacgaggtcctcctcggc 15902571



 Score =  117 bits (59), Expect = 2e-23
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                            
Query: 141      tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
                |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct: 16015092 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 16015151

                                                                            
Query: 201      ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
                | ||  | |||||   ||  ||||||||| | |||||||| |||||| ||| ||| ||| 
Sbjct: 16015152 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 16015211

                                                                           
Query: 261      tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgag 319
                ||||||| ||||||||| | |||||| || || |  |||| ||||||||||||||||||
Sbjct: 16015212 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgag 16015270



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 89/105 (84%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                            
Query: 139      cgtgaagctgggctcccaggggatggaggtctcggcgca--gggcctcggctgcatgggt 196
                ||||||||||||||| ||||||  |||  ||||  ||||  |||||| ||||||||||| 
Sbjct: 15899946 cgtgaagctgggctcgcaggggccggatatctcaacgcagtgggcctgggctgcatgggc 15900005

                                                             
Query: 197      atgtccgccttctacggcccgcccaa-gccggagccagacatggt 240
                |||||||| |||||||||||| |||| ||||||| | ||||||||
Sbjct: 15900006 atgtccgctttctacggcccgtccaatgccggaggccgacatggt 15900050

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>dbj|AK099774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095E15, full
           insert sequence
          Length = 1374

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
           ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 77  tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 136

                                                                       
Query: 201 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 137 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 196

                                                                       
Query: 261 tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
           ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 197 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 256

                      
Query: 321 tcctcctcggc 331
           |||||||||||
Sbjct: 257 tcctcctcggc 267

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>dbj|AK061686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B01, full
           insert sequence
          Length = 1366

 Score =  228 bits (115), Expect = 9e-57
 Identities = 171/191 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
           ||||||||||||| |||||  ||||||||||||||||||| || || |||||||| ||||
Sbjct: 76  tgaagctgggctcgcagggtctggaggtctcggcgcaggggctgggatgcatgggcatgt 135

                                                                       
Query: 201 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| 
Sbjct: 136 ccgccttctacggcccgcccaagccggagcccgacatggtggcgctcatccaccacgccg 195

                                                                       
Query: 261 tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgaga 320
           ||||||||||||||||||| |||||| || || | ||||| || || |||||||||||| 
Sbjct: 196 tcgccgccggcgtcaccctcctcgacacctccgacatctacggcccccacaccaacgagc 255

                      
Query: 321 tcctcctcggc 331
           |||||||||||
Sbjct: 256 tcctcctcggc 266

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>ref|XM_471942.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1107

 Score =  212 bits (107), Expect = 5e-52
 Identities = 172/195 (88%)
 Strand = Plus / Plus

                                                                       
Query: 137 cgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggt 196
           ||||||||||||||||| |||||  ||||||||||||||||||| || ||||||||||| 
Sbjct: 37  cgcgtgaagctgggctcgcagggcctggaggtctcggcgcaggggctgggctgcatgggc 96

                                                                       
Query: 197 atgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccan 256
           |||||||||||| |||| ||| ||||||||||| | |||||||| |||||||||||||| 
Sbjct: 97  atgtccgccttccacgggccgtccaagccggaggccgacatggtggcgctcatccaccac 156

                                                                       
Query: 257 gccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaac 316
           ||| ||||||||||||||||||| |||||| || || | ||||| ||||||||| |||||
Sbjct: 157 gccgtcgccgccggcgtcaccctcctcgacaccgccgacatctacgggccgcacgccaac 216

                          
Query: 317 gagatcctcctcggc 331
           |||  ||||||||||
Sbjct: 217 gaggccctcctcggc 231

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>ref|XM_471940.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1038

 Score =  155 bits (78), Expect = 1e-34
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 189
           |||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 15  ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 74

                                                                       
Query: 190 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 249
           |||||| |||| | |   || ||  ||||||||||||||| | |||||||| ||||||||
Sbjct: 75  catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 134

                                                                       
Query: 250 ccaccangccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgca 309
           || ||| ||| ||||||||||||||||  |  ||||| || || |  |||| || || ||
Sbjct: 135 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 194

                                 
Query: 310 caccaacgagatcctcctcggc 331
           |||||||||| |||||||||||
Sbjct: 195 caccaacgaggtcctcctcggc 216

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>dbj|AK104524.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G01, full
           insert sequence
          Length = 1407

 Score =  155 bits (78), Expect = 1e-34
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 189
           |||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 69  ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 128

                                                                       
Query: 190 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 249
           |||||| |||| | |   || ||  ||||||||||||||| | |||||||| ||||||||
Sbjct: 129 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 188

                                                                       
Query: 250 ccaccangccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgca 309
           || ||| ||| ||||||||||||||||  |  ||||| || || |  |||| || || ||
Sbjct: 189 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 248

                                 
Query: 310 caccaacgagatcctcctcggc 331
           |||||||||| |||||||||||
Sbjct: 249 caccaacgaggtcctcctcggc 270

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>dbj|AK068652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160A22, full
           insert sequence
          Length = 1448

 Score =  155 bits (78), Expect = 1e-34
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 ggtgccacgcgtgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctg 189
           |||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 70  ggtgccgcgggtgaagctgggctctcaggggatggaggtctcggcgcaggggctcggctg 129

                                                                       
Query: 190 catgggtatgtccgccttctacggcccgcccaagccggagccagacatggtcgcgctcat 249
           |||||| |||| | |   || ||  ||||||||||||||| | |||||||| ||||||||
Sbjct: 130 catgggcatgtgcccggccttcgagccgcccaagccggaggccgacatggtggcgctcat 189

                                                                       
Query: 250 ccaccangccntcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgca 309
           || ||| ||| ||||||||||||||||  |  ||||| || || |  |||| || || ||
Sbjct: 190 ccgccacgccatcgccgccggcgtcacgttcttcgacacctccgacctctacggccccca 249

                                 
Query: 310 caccaacgagatcctcctcggc 331
           |||||||||| |||||||||||
Sbjct: 250 caccaacgaggtcctcctcggc 271

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>ref|XM_471950.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score =  117 bits (59), Expect = 2e-23
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
           |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct: 50  tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 109

                                                                       
Query: 201 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
           | ||  | |||||   ||  ||||||||| | |||||||| |||||| ||| ||| ||| 
Sbjct: 110 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 169

                                                                      
Query: 261 tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgag 319
           ||||||| ||||||||| | |||||| || || |  |||| ||||||||||||||||||
Sbjct: 170 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgag 228

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>dbj|AK103553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F18, full
           insert sequence
          Length = 1236

 Score =  117 bits (59), Expect = 2e-23
 Identities = 148/179 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgaagctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatgggtatgt 200
           |||||||||| || |||||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct: 102 tgaagctggggtcgcaggggatggaggtgtcggcgcaggggctgggctgcatgggcatgt 161

                                                                       
Query: 201 ccgccttctacggcccgcccaagccggagccagacatggtcgcgctcatccaccangccn 260
           | ||  | |||||   ||  ||||||||| | |||||||| |||||| ||| ||| ||| 
Sbjct: 162 cggcggtgtacggggagcggaagccggaggccgacatggtggcgctcgtccgccacgccg 221

                                                                      
Query: 261 tcgccgccggcgtcaccctgctcgactccnccnatatctatgggccgcacaccaacgag 319
           ||||||| ||||||||| | |||||| || || |  |||| ||||||||||||||||||
Sbjct: 222 tcgccgcgggcgtcaccttcctcgacacctccgacgtctacgggccgcacaccaacgag 280

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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 162     tggaggtctcggcgcagggcctcggctgcatggg 195
               |||||||||||||||  |||||||||||||||||
Sbjct: 6108901 tggaggtctcggcgcttggcctcggctgcatggg 6108868

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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                     
Query: 165     aggtctcggcgcagggcctcggctgcatgggtatgtccgccttctacggcccgc 218
               |||| ||||||| ||| |||||||||||||| |||  ||| |||||||||||||
Sbjct: 1196498 aggtttcggcgctgggtctcggctgcatgggcatgagcgctttctacggcccgc 1196551

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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 179     ggcctcggctgcatgggtatgtccgccttctacggcccgccc 220
               ||||||||||||||||| ||||| | |||||||||| |||||
Sbjct: 2997820 ggcctcggctgcatgggcatgtctgacttctacggcacgccc 2997779

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>ref|XM_469528.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1113

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 145  gctgggctcccaggggatggaggtctcggcg 175
            ||||||||||||| |||||| ||||||||||
Sbjct: 1077 gctgggctcccagaggatggtggtctcggcg 1047

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 145      gctgggctcccaggggatggaggtctcggcg 175
                ||||||||||||| |||||| ||||||||||
Sbjct: 28527793 gctgggctcccagaggatggtggtctcggcg 28527823

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 145      gctgggctcccaggggatggaggtctcggcg 175
                ||||||||||||| |||||| ||||||||||
Sbjct: 28619117 gctgggctcccagaggatggtggtctcggcg 28619147

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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
              sequence
          Length = 143681

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 145    gctgggctcccaggggatggaggtctcggcg 175
              ||||||||||||| |||||| ||||||||||
Sbjct: 121923 gctgggctcccagaggatggtggtctcggcg 121953

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>dbj|AB180689.1| Oryza sativa (japonica cultivar-group) OsGS1;3 mRNA for cytosolic
            glutamine synthetase 1;3, complete cds
          Length = 1543

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 145  gctgggctcccaggggatggaggtctcggcg 175
            ||||||||||||| |||||| ||||||||||
Sbjct: 1245 gctgggctcccagaggatggtggtctcggcg 1215

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 145    gctgggctcccaggggatggaggtctcggcgcagggcctcggctgcatggg 195
              |||||||  ||||||| | ||||| |||||||  |||||||||||||||||
Sbjct: 633924 gctgggcagccaggggctcgaggtgtcggcgctcggcctcggctgcatggg 633974

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>dbj|AK099290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127P21, full
            insert sequence
          Length = 1457

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 145  gctgggctcccaggggatggaggtctcggcg 175
            ||||||||||||| |||||| ||||||||||
Sbjct: 1198 gctgggctcccagaggatggtggtctcggcg 1168

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>dbj|AK063913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A09, full
            insert sequence
          Length = 1494

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 145  gctgggctcccaggggatggaggtctcggcg 175
            ||||||||||||| |||||| ||||||||||
Sbjct: 1198 gctgggctcccagaggatggtggtctcggcg 1168

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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 262     cgccgccggcgtcaccctgctcgac 286
               ||||||||||| |||||||||||||
Sbjct: 2318550 cgccgccggcgccaccctgctcgac 2318574

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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    caccaacgagatcctcctcgg 330
              |||||||||||||||||||||
Sbjct: 278344 caccaacgagatcctcctcgg 278324

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>gb|AE004681.1| Pseudomonas aeruginosa PAO1, section 242 of 529 of the complete
            genome
          Length = 11002

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 179  ggcctcggctgcatgggtatgtccgccttctac 211
            ||||||||||||||||| ||| ||| |||||||
Sbjct: 4618 ggcctcggctgcatgggcatgaccgacttctac 4650

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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 179     ggcctcggctgcatgggtatg 199
               |||||||||||||||||||||
Sbjct: 4001926 ggcctcggctgcatgggtatg 4001946

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>gb|AF030301.1|AF030301 Helianthus annuus auxin-induced protein (HaAC1) mRNA, complete cds
          Length = 1218

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 77/96 (80%)
 Strand = Plus / Plus

                                                                       
Query: 164 gaggtctcggcgcagggcctcggctgcatgggtatgtccgccttctacggcccgcccaag 223
           |||||||| || |||||  | ||||||||| | |||||||| |||||||| || ||||| 
Sbjct: 57  gaggtctcagctcagggtttaggctgcatgagcatgtccgctttctacggacctcccaaa 116

                                               
Query: 224 ccggagccagacatggtcgcgctcatccaccangcc 259
           || || || |||||| ||   ||||||||||| |||
Sbjct: 117 cctgaacctgacatgatcaatctcatccaccacgcc 152

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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 182     ctcggctgcatgggtatgtccgccttctacgg 213
               |||||||||||||| ||||| | |||||||||
Sbjct: 1396628 ctcggctgcatggggatgtcggacttctacgg 1396659

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>ref|NM_192811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ccaacgagatcctcctcggc 331
           ||||||||||||||||||||
Sbjct: 164 ccaacgagatcctcctcggc 183

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>gb|AC183539.2| Pan troglodytes BAC clone CH251-340H7 from chromosome 15, complete
             sequence
          Length = 155024

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaagctgggctcccagggga 161
             ||||||||||||||||||||
Sbjct: 63711 gaagctgggctcccagggga 63692

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>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11,
              complete sequence
          Length = 199348

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    tcgccgccggcgtcaccctgctcg 284
              |||||||||||||| |||||||||
Sbjct: 167736 tcgccgccggcgtcgccctgctcg 167713

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>gb|AC016204.12| Homo sapiens chromosome 15, clone RP11-25C1, complete sequence
          Length = 141447

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gaagctgggctcccagggga 161
              ||||||||||||||||||||
Sbjct: 127915 gaagctgggctcccagggga 127896

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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 164     gaggtctcggcgcagggcctcggctgcatggg 195
               ||||| ||||||| ||| ||||||||||||||
Sbjct: 5465012 gaggtttcggcgctggggctcggctgcatggg 5464981

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 261      tcgccgccggcgtcaccctgctcg 284
                |||||||||||||| |||||||||
Sbjct: 25038688 tcgccgccggcgtcgccctgctcg 25038665

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 312      ccaacgagatcctcctcggc 331
                ||||||||||||||||||||
Sbjct: 24577747 ccaacgagatcctcctcggc 24577728

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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1040D09
          Length = 148102

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  ccaacgagatcctcctcggc 331
            ||||||||||||||||||||
Sbjct: 3710 ccaacgagatcctcctcggc 3691

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 179     ggcctcggctgcatgggtatgtcc 202
               ||||||||||||||||| ||||||
Sbjct: 6816720 ggcctcggctgcatgggcatgtcc 6816743

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>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence
          Length = 192533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaagctgggctcccagggga 161
              ||||||||||||||||||||
Sbjct: 185472 gaagctgggctcccagggga 185491

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>gb|AC091951.3| Homo sapiens chromosome 5 clone RP11-404K5, complete sequence
          Length = 160174

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gaagctgggctcccagggga 161
             ||||||||||||||||||||
Sbjct: 38277 gaagctgggctcccagggga 38258

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>dbj|AK100460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N11, full
           insert sequence
          Length = 1327

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ccaacgagatcctcctcggc 331
           ||||||||||||||||||||
Sbjct: 313 ccaacgagatcctcctcggc 332

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>gb|AC156502.2| Mus musculus BAC clone RP23-355N1 from 9, complete sequence
          Length = 204883

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   ggctcccaggggatggaggt 168
             ||||||||||||||||||||
Sbjct: 22682 ggctcccaggggatggaggt 22701

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>emb|CT033793.10| Mouse DNA sequence from clone RP23-21O10 on chromosome 9, complete
             sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   ggctcccaggggatggaggt 168
             ||||||||||||||||||||
Sbjct: 40741 ggctcccaggggatggaggt 40760

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 261      tcgccgccggcgtcaccctgctcg 284
                |||||||||||||| |||||||||
Sbjct: 25350278 tcgccgccggcgtcgccctgctcg 25350255

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>gb|AC011767.12| Homo sapiens chromosome 15, clone RP11-26F2, complete sequence
          Length = 180233

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gaagctgggctcccagggga 161
              ||||||||||||||||||||
Sbjct: 126882 gaagctgggctcccagggga 126863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,645,367
Number of Sequences: 3902068
Number of extensions: 1645367
Number of successful extensions: 26641
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26125
Number of HSP's gapped (non-prelim): 511
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result