Clone Name | bart07d12 |
---|---|
Clone Library Name | barley_pub |
>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)| Length = 483 Score = 223 bits (568), Expect = 3e-58 Identities = 105/128 (82%), Positives = 114/128 (89%) Frame = +2 Query: 143 EKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYS 322 EKA T+ VG Y EME+DG S+LS + WHGGSAYDAWFSCASNQVAQVLLTLPYS Sbjct: 5 EKAAETVVVGNYVEMEKDGKALDIKSKLSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYS 64 Query: 323 FSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGLL 502 FSQLGM+SGILFQLFYG++GSWTAYLISILYVEYRTRKEREK +FRNHVIQWFEVLDGLL Sbjct: 65 FSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLL 124 Query: 503 GRHWRNVG 526 G+HWRNVG Sbjct: 125 GKHWRNVG 132
>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)| (MtLAX5) Length = 490 Score = 219 bits (558), Expect = 4e-57 Identities = 104/132 (78%), Positives = 116/132 (87%), Gaps = 1/132 (0%) Frame = +2 Query: 134 LADEKAPGTIGVGRYEEMEQDGAP-STAXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLT 310 +A++K T+ VG Y EME +G P S+LS LWHGGSAYDAWFSCASNQVAQVLLT Sbjct: 3 MANDKVAETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSAYDAWFSCASNQVAQVLLT 62 Query: 311 LPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVL 490 LPYSFSQLGM+SGILFQLFYG++GSWTAYLISILYVEYRTRKEREK +FR+HVIQWFEVL Sbjct: 63 LPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVL 122 Query: 491 DGLLGRHWRNVG 526 DGLLG+HWRNVG Sbjct: 123 DGLLGKHWRNVG 134
>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3| Length = 547 Score = 219 bits (557), Expect = 5e-57 Identities = 108/151 (71%), Positives = 119/151 (78%), Gaps = 13/151 (8%) Frame = +2 Query: 113 AAAANDGLADEKAPGTI------------GVGRYEEMEQD-GAPSTAXSRLSGLLWHGGS 253 + ++ G ADEK PG G G EE + G + A +RLSGLLWHGGS Sbjct: 3 SGSSGGGYADEKGPGAATMQALGLQQQHGGGGEVEEESSEMGEKTAARTRLSGLLWHGGS 62 Query: 254 AYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTR 433 AYDAWFSCASNQVAQVLLTLPYSF+QLGM SG+LFQLFYGL+GSWTAYLISILY+EYRTR Sbjct: 63 AYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYGLLGSWTAYLISILYLEYRTR 122 Query: 434 KEREKADFRNHVIQWFEVLDGLLGRHWRNVG 526 KER+K DFRNHVIQWFEVLDGLLGRHWRNVG Sbjct: 123 KERDKVDFRNHVIQWFEVLDGLLGRHWRNVG 153
>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)| (MtLAX3) Length = 465 Score = 209 bits (531), Expect = 5e-54 Identities = 99/125 (79%), Positives = 110/125 (88%), Gaps = 2/125 (1%) Frame = +2 Query: 158 TIGVGRYEEME--QDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQ 331 T+ G Y EME ++G+ ST +LS WHGGS YDAWFSCASNQVAQVLLTLPYSFSQ Sbjct: 8 TVVAGNYLEMEREEEGSKSTT-GKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQ 66 Query: 332 LGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGLLGRH 511 LGM+SGILFQ+FYGLMGSWTAY+IS+LYVEYRTRKEREK DFRNHVIQWFEVLDGLLG+H Sbjct: 67 LGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKH 126 Query: 512 WRNVG 526 WRN+G Sbjct: 127 WRNLG 131
>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)| Length = 470 Score = 208 bits (530), Expect = 6e-54 Identities = 99/129 (76%), Positives = 109/129 (84%), Gaps = 6/129 (4%) Frame = +2 Query: 158 TIGVGRYEEMEQD------GAPSTAXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPY 319 T+ G Y EME++ S+ ++LS WHGGS YDAWFSCASNQVAQVLLTLPY Sbjct: 8 TVVAGNYLEMEREEENISGNKKSSTKTKLSNFFWHGGSVYDAWFSCASNQVAQVLLTLPY 67 Query: 320 SFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGL 499 SFSQLGM+SGILFQLFYGLMGSWTAYLIS+LYVEYRTRKEREK DFRNHVIQWFEVLDGL Sbjct: 68 SFSQLGMMSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKFDFRNHVIQWFEVLDGL 127 Query: 500 LGRHWRNVG 526 LG+HWRN+G Sbjct: 128 LGKHWRNLG 136
>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4| Length = 480 Score = 204 bits (518), Expect = 2e-52 Identities = 100/146 (68%), Positives = 110/146 (75%), Gaps = 15/146 (10%) Frame = +2 Query: 134 LADEKAPGTIGVGRYEEMEQDGAPSTAXS---------------RLSGLLWHGGSAYDAW 268 +A EK TI G Y EME++GA + +S L WHGGS YDAW Sbjct: 1 MASEKVE-TIVAGNYVEMEREGAATAGEGVGGAAAASGRRRGKLAVSSLFWHGGSVYDAW 59 Query: 269 FSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREK 448 FSCASNQVAQVLLTLPYSFSQLGM SG+ FQ+FYGLMGSWTAYLIS+LYVEYRTR+ER+K Sbjct: 60 FSCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEYRTRRERDK 119 Query: 449 ADFRNHVIQWFEVLDGLLGRHWRNVG 526 DFRNHVIQWFEVLDGLLGRHWRN G Sbjct: 120 VDFRNHVIQWFEVLDGLLGRHWRNAG 145
>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)| (MtLAX1) Length = 479 Score = 187 bits (476), Expect = 1e-47 Identities = 92/147 (62%), Positives = 108/147 (73%) Frame = +2 Query: 86 SSKSSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDA 265 S K TM ++ N+ TI + E E+ +P S LWHGGS YDA Sbjct: 3 SEKQGEETMMSSLNE---------TIELNEEREEEKGASPG---SGFKNFLWHGGSVYDA 50 Query: 266 WFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKERE 445 WFSCASNQVAQVLLTLPYSFSQLGM+SGI+FQ+FYGLMGSWTAYLISILYVEYR+RKE+E Sbjct: 51 WFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYRSRKEKE 110 Query: 446 KADFRNHVIQWFEVLDGLLGRHWRNVG 526 F+NHVIQWFEVL+GLLG +W+ +G Sbjct: 111 NVSFKNHVIQWFEVLEGLLGPYWKAIG 137
>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1| Length = 492 Score = 184 bits (466), Expect = 2e-46 Identities = 88/137 (64%), Positives = 100/137 (72%) Frame = +2 Query: 116 AAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQVA 295 A D E+ G +GV E D + LLWHGGS +DAWFSCASNQVA Sbjct: 10 AIVADSNGKEEEVGVMGVSAGEHGADDHHGGGGKFSMKNLLWHGGSVWDAWFSCASNQVA 69 Query: 296 QVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQ 475 QVLLTLPYSFSQLGM+SG+L QLFYG MGSWTAYLIS+LYVEYR+RKE+E F+NHVIQ Sbjct: 70 QVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQ 129 Query: 476 WFEVLDGLLGRHWRNVG 526 WFEVLDGLLG +W+ G Sbjct: 130 WFEVLDGLLGPYWKAAG 146
>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)| (MtLAX4) Length = 482 Score = 184 bits (466), Expect = 2e-46 Identities = 87/127 (68%), Positives = 100/127 (78%), Gaps = 7/127 (5%) Frame = +2 Query: 167 VGRYEEMEQDGAPST-------AXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSF 325 V E EQ+G S + LWHGGS +DAWFSCASNQVAQVLLTLPYSF Sbjct: 12 VTNMNETEQEGGSSLEEIAEDQSMFNFKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSF 71 Query: 326 SQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGLLG 505 SQLGMVSGI+FQ+FYGL+GSWTAYLIS+LYVEYR RKE+E +F+NHVIQWFEVLDGLLG Sbjct: 72 SQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYRARKEKENVNFKNHVIQWFEVLDGLLG 131 Query: 506 RHWRNVG 526 R+W+ +G Sbjct: 132 RYWKALG 138
>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein| 1) (Polar auxin transport inhibitor resistant protein 1) Length = 485 Score = 182 bits (463), Expect = 4e-46 Identities = 90/138 (65%), Positives = 104/138 (75%) Frame = +2 Query: 113 AAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQV 292 A AND D+ G + E DG+ S LS LWHGGS +DAWFSCASNQV Sbjct: 7 AIVANDNGTDQVNGNRTGK---DNEEHDGSTG---SNLSNFLWHGGSVWDAWFSCASNQV 60 Query: 293 AQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVI 472 AQVLLTLPYSFSQLGM+SGI+ Q+FYGL+GSWTAYLIS+LYVEYR RKE+E F+NHVI Sbjct: 61 AQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKSFKNHVI 120 Query: 473 QWFEVLDGLLGRHWRNVG 526 QWFEVLDGLLG +W+ +G Sbjct: 121 QWFEVLDGLLGSYWKALG 138
>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2| Length = 482 Score = 181 bits (460), Expect = 8e-46 Identities = 90/138 (65%), Positives = 105/138 (76%) Frame = +2 Query: 113 AAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQV 292 A A+ G + + +GV EQDG S ++ LLWHGGS +DAWFSCASNQV Sbjct: 11 AIVADAGKEEAEVRAAMGV------EQDGKFS-----MTSLLWHGGSVWDAWFSCASNQV 59 Query: 293 AQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVI 472 AQVLLTLPYSFSQLGM+SG+L Q+FYGLMGSWTAYLIS+LYVEYR RKE+E F+NHVI Sbjct: 60 AQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVI 119 Query: 473 QWFEVLDGLLGRHWRNVG 526 QWFEVLDGLLG +W+ G Sbjct: 120 QWFEVLDGLLGPYWKAAG 137
>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)| (MtLAX2) Length = 484 Score = 180 bits (456), Expect = 2e-45 Identities = 84/120 (70%), Positives = 99/120 (82%) Frame = +2 Query: 167 VGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVS 346 VGR EE+E + LWHGGS +DAWFSCASNQVAQVLLTLPYSFSQLGM+S Sbjct: 25 VGREEEVEDHSFS------VKNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLS 78 Query: 347 GILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGLLGRHWRNVG 526 GIL Q+FYG++GSWTAYLIS+LYVEYR+RKE+E +F+NHVIQWFEVLDGLLG +W+ +G Sbjct: 79 GILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGPYWKALG 138
>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)| Length = 488 Score = 175 bits (443), Expect = 8e-44 Identities = 88/146 (60%), Positives = 106/146 (72%), Gaps = 1/146 (0%) Frame = +2 Query: 92 KSSRVTMAAAANDGLADEKAPGTIGVGRYEEMEQDGAPSTAXSRLSGLLWHGGSAYDAWF 271 K + ++ + D +A K + E + DG S + LWHGGSA+DAWF Sbjct: 5 KQAEESIVVSGEDEVAGRKVEDSAA-----EEDIDGNGGNGFS-MKSFLWHGGSAWDAWF 58 Query: 272 SCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKA 451 SCASNQVAQVLLTLPYSFSQLGM+SGIL Q+FYGLMGSWTAYLIS+LYVEYR R E+++A Sbjct: 59 SCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEA 118 Query: 452 -DFRNHVIQWFEVLDGLLGRHWRNVG 526 F+NHVIQWFEVLDGLLG +W+ G Sbjct: 119 KSFKNHVIQWFEVLDGLLGPYWKAAG 144
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +1 Query: 22 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 129 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +1 Query: 22 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 129 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Frame = +1 Query: 22 ARSINKAQLESTSRTRR---RHYTQFEEQSSDHGRSSQR 129 +RS ++++ ES SR+RR RHYT+ +S H RS R Sbjct: 46 SRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSR 84
>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV| Length = 615 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = +2 Query: 269 FSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLI 403 FS + + LL +P++ Q G+V GI+ L + +TAY++ Sbjct: 170 FSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIV 214
>MTR_NEUCR (P38680) N amino acid transport system protein (Methyltryptophan| resistance protein) Length = 470 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = +2 Query: 305 LTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLI 403 L+LP +F+ LGMV G++ + GL+ +TA++I Sbjct: 72 LSLPGAFATLGMVPGVILSVGMGLICIYTAHVI 104
>ATG22_CRYNE (Q5KFW2) Autophagy-related protein 22| Length = 546 Score = 30.8 bits (68), Expect = 2.4 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 296 QVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISILYV 418 ++LLT YS G +SGILF LF L +WT + +IL + Sbjct: 88 RLLLTFAYS----GSLSGILFLLFPPLPYAWTPIMAAILNI 124
>COBB_BACHD (Q9KBM8) Cobyrinic acid A,C-diamide synthase| Length = 465 Score = 30.4 bits (67), Expect = 3.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 397 VGGPAPHEAVEELEQYAAHHPQLREGVGQG 308 +GG P E +EL Q+ HPQL++ V G Sbjct: 296 LGGGFPEEFADELSQWIKDHPQLKKRVQSG 325
>ODO1_STAES (Q8CP83) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 30.4 bits (67), Expect = 3.1 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +2 Query: 47 SSLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXS 220 S + LGG T +S ++ A N + AP G R + Q GAPST Sbjct: 290 SDVKYHLGGVKTTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGAPSTDFH 349 Query: 221 RLSGLLWHGGSAY 259 + ++ HG +AY Sbjct: 350 KAMPIIIHGDAAY 362
>PNS1_CRYNE (Q5KQ32) Protein PNS1| Length = 551 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +2 Query: 239 WHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSG--ILFQLFYGLMGSWTAY 397 W GSA + C+S++VA ++ +S+ L V G IL L G+ G W Y Sbjct: 274 WTPGSAACSDGGCSSSKVAGLVFYATFSYLWLSQVIGNVILCTLAGGVFGGWYYY 328
>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog| Length = 772 Score = 30.0 bits (66), Expect = 4.1 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +1 Query: 13 GLTARSINKAQLESTSRTRRRHYTQFEEQSSDHGRSSQR 129 G RS ++ + S SR+R R ++ +S HGRSS+R Sbjct: 23 GRKQRSRSRGRSRSRSRSRSRSRSRSRSRSRSHGRSSRR 61
>AVT2_YEAST (P39981) Vacuolar amino acid transporter 2| Length = 480 Score = 29.3 bits (64), Expect = 7.0 Identities = 13/49 (26%), Positives = 27/49 (55%) Frame = +2 Query: 263 AWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLMGSWTAYLISI 409 A+ + A++ + ++T P++ G++ G+L + G + WT LI I Sbjct: 72 AFMNLANSILGAGIITQPFAIKNAGILGGLLSYVALGFIVDWTLRLIVI 120
>ODO1_STAAW (Q8NWR6) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAU (Q7WRM3) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAS (Q6G9E8) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAR (Q6GGZ5) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAM (Q931R8) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>ODO1_STAAC (Q5HG06) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 932 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 293 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 352 Query: 239 WHGGSAY 259 HG +AY Sbjct: 353 IHGDAAY 359
>EME1_ASHGO (Q75B88) Crossover junction endonuclease EME1 (EC 3.1.22.-)| Length = 714 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 44 NSSLPQELGGDTTPSSKSSRVTMAAAANDG 133 N+ L ELGG+++PS ++ + A +NDG Sbjct: 219 NNILSSELGGESSPSLQALTTPLPAKSNDG 248
>ELF4_MOUSE (Q9Z2U4) ETS-related transcription factor Elf-4 (E74-like factor 4)| (Myeloid Elf-1-like factor) Length = 655 Score = 28.9 bits (63), Expect = 9.1 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = +1 Query: 352 TVPALLRPHGELDRLPHQHPLRGVQDQEGEGEGRLQEPCHPVV 480 T+ LLR G L LP Q RG + G L P HP V Sbjct: 564 TLRELLRDQGHLQPLPSQVLSRGSHNLSLVGNQTLSPPSHPTV 606
>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial| precursor (RNA-splicing protein mrs2) Length = 597 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 281 SNQVAQVLLTLPYSFSQLGMVSGILFQLFYGL 376 +N+ + +LL L +S LG+ +G LF YG+ Sbjct: 418 ANRNSLMLLDLKFSIGTLGLATGTLFSALYGM 449
>ODO1_STAEQ (Q5HPC6) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 934 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +2 Query: 47 SSLPQELGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXS 220 S + LGG T +S ++ A N + AP G R + Q G PST Sbjct: 290 SDVKYHLGGVKTTNSYGIEQRISLANNPSHLEIVAPVVAGKTRAAQDNTHQVGGPSTDFH 349 Query: 221 RLSGLLWHGGSAY 259 + ++ HG +AY Sbjct: 350 KAMPIIIHGDAAY 362
>OPT1_YEAST (P40897) Oligopeptide transporter 1| Length = 799 Score = 28.9 bits (63), Expect = 9.1 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 507 LPSSPSSTSNHWMTWFLKSAFSLSF 433 + P+ NHW TWFL + F + F Sbjct: 96 IEDDPTIRLNHWRTWFLTTVFVVVF 120
>ODO1_STAAN (Q99U74) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 910 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 65 LGGDTTPSSKSSRVTMAAAANDGLADEKAPGTIGVGR--YEEMEQDGAPSTAXSRLSGLL 238 LGG T S + +A A N + AP G R ++ ++ GAP+T + ++ Sbjct: 271 LGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPII 330 Query: 239 WHGGSAY 259 HG +AY Sbjct: 331 IHGDAAY 337 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,766,826 Number of Sequences: 219361 Number of extensions: 1145644 Number of successful extensions: 3311 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3308 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)