ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart07d12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K12, full insert sequence Length = 1964 Score = 450 bits (227), Expect = e-123 Identities = 359/402 (89%), Gaps = 6/402 (1%) Strand = Plus / Plus Query: 132 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 188 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 142 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 201 Query: 189 agcaagacggcgcc---ccgagcaccgcanagtcgcggctctccggcctcctgtggcacg 245 |||| ||||||| | || ||||||||| |||| |||||||||||||| || ||||||| Sbjct: 202 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 261 Query: 246 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccaggtgctcc 305 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 262 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtggcccaggtgctcc 321 Query: 306 tgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttccagctct 365 |||| |||||||||| ||||| || ||||||||| | |||||||||||||||||||||| Sbjct: 322 tgacgctgccctactcgttctcccagctggggatgctcagcggcatactgttccagctct 381 Query: 366 tctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtggagtaca 425 ||||||| || |||| |||||||| || || |||||||||||||| ||||||||||||| Sbjct: 382 tctacgggctgttgggcagctggacggcgtatctcatcagcatcctgtacgtggagtaca 441 Query: 426 ggaccaggaaggagagggagaaggccgacttcaggaaccatgtcatccagtggttcgagg 485 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 442 ggaccaggaaggagagggagaaggtggacttcaggaaccatgtcatccagtggttcgagg 501 Query: 486 tgctggacgggctgctggggaggcactggaggaacgtcggcc 527 |||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 502 tgctggacggcctgctggggaggcattggagaaacgtcggcc 543
>gb|AY109836.1| Zea mays CL468_-5 mRNA sequence Length = 884 Score = 274 bits (138), Expect = 3e-70 Identities = 189/206 (91%) Strand = Plus / Plus Query: 216 agtcgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagct 275 ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 210 agtcgcggctctccggcctgctctggcacggcggctccgcctacgacgcttggttcagct 269 Query: 276 gcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgg 335 |||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 270 gcgcgtccaaccaggtggctcaggtgctcctgaccctgccctactcgttctcgcaactgg 329 Query: 336 ggatggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcct 395 ||||| ||||||||||||||||||||||| | ||||| || ||||| |||||||| || | Sbjct: 330 ggatgctgagcggcatactgttccagctcctgtacgggctgatgggcagctggacggcgt 389 Query: 396 acctcatcagcatcctctacgtggag 421 ||||||||||| | |||||||||||| Sbjct: 390 acctcatcagcgttctctacgtggag 415 Score = 133 bits (67), Expect = 6e-28 Identities = 70/71 (98%) Strand = Plus / Plus Query: 457 caggaaccatgtcatccagtggttcgaggtgctggacgggctgctggggaggcactggag 516 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 451 caggaaccatgtcatccagtggttcgaggtgctggacgggctgctcgggaggcactggag 510 Query: 517 gaacgtcggcc 527 ||||||||||| Sbjct: 511 gaacgtcggcc 521
>ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative AUX1-like permease (OSJNBb0016M10.2), mRNA Length = 1644 Score = 256 bits (129), Expect = 6e-65 Identities = 258/301 (85%) Strand = Plus / Plus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 152 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 211 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 212 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 271 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 272 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 331 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 332 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 391 Query: 459 ggaaccatgtcatccagtggttcgaggtgctggacgggctgctggggaggcactggagga 518 | ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct: 392 gcaaccacgtcatccagtggtttgaggtgctggatgggctactggggaggcactggagga 451 Query: 519 a 519 | Sbjct: 452 a 452
>dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O21, full insert sequence Length = 2015 Score = 256 bits (129), Expect = 6e-65 Identities = 258/301 (85%) Strand = Plus / Plus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 272 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 331 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 332 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 391 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 392 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 451 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 452 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 511 Query: 459 ggaaccatgtcatccagtggttcgaggtgctggacgggctgctggggaggcactggagga 518 | ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct: 512 gcaaccacgtcatccagtggtttgaggtgctggatgggctactggggaggcactggagga 571 Query: 519 a 519 | Sbjct: 572 a 572
>dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L08, full insert sequence Length = 2106 Score = 256 bits (129), Expect = 6e-65 Identities = 258/301 (85%) Strand = Plus / Plus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 277 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 336 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 337 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 396 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 397 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 456 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 457 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 516 Query: 459 ggaaccatgtcatccagtggttcgaggtgctggacgggctgctggggaggcactggagga 518 | ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||| Sbjct: 517 gcaaccacgtcatccagtggtttgaggtgctggatgggctactggggaggcactggagga 576 Query: 519 a 519 | Sbjct: 577 a 577
>emb|AJ011794.1|ZMA011794 Zea mays mRNA for AUX1 protein Length = 2108 Score = 246 bits (124), Expect = 6e-62 Identities = 243/282 (86%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 236 ctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcc 295 |||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||| Sbjct: 198 ctgtggcacggcgggtccgcgtacgacgcgtggttcagctgcgcgtcgaaccaggtggcg 257 Query: 296 caggtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactg 355 |||||||| ||||| |||||||||| ||| |||| ||||||||| |||||||| | ||| Sbjct: 258 caggtgctgctgacgctgccctactcgttcgcgcagctggggatgctgagcggcgtgctg 317 Query: 356 ttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctac 415 |||||||||||||||||||| |||| |||||||| || ||||| ||||||||||| ||| Sbjct: 318 ttccagctcttctacggcctgctgggcagctggacggcgtacctgatcagcatcctgtac 377 Query: 416 gtggagtacaggaccaggaaggagagggagaaggcc---gacttcaggaaccatgtcatc 472 |||||||| | ||| | |||| | ||||||||| |||||| ||||||| || ||| Sbjct: 378 ctggagtaccgcacccgtcgggagcgcgagaaggccgcggacttccggaaccacgtgatc 437 Query: 473 cagtggttcgaggtgctggacgggctgctggggaggcactgg 514 |||||||||||||||||||||||||||||||| |||||||| Sbjct: 438 cagtggttcgaggtgctggacgggctgctgggccggcactgg 479
>gb|AY109689.1| Zea mays CL468_2 mRNA sequence Length = 2108 Score = 246 bits (124), Expect = 6e-62 Identities = 243/282 (86%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 236 ctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcc 295 |||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||||| Sbjct: 198 ctgtggcacggcgggtccgcgtacgacgcgtggttcagctgcgcgtcgaaccaggtggcg 257 Query: 296 caggtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactg 355 |||||||| ||||| |||||||||| ||| |||| ||||||||| |||||||| | ||| Sbjct: 258 caggtgctgctgacgctgccctactcgttcgcgcagctggggatgctgagcggcgtgctg 317 Query: 356 ttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctac 415 |||||||||||||||||||| |||| |||||||| || ||||| ||||||||||| ||| Sbjct: 318 ttccagctcttctacggcctgctgggcagctggacggcgtacctgatcagcatcctgtac 377 Query: 416 gtggagtacaggaccaggaaggagagggagaaggcc---gacttcaggaaccatgtcatc 472 |||||||| | ||| | |||| | ||||||||| |||||| ||||||| || ||| Sbjct: 378 ctggagtaccgcacccgtcgggagcgcgagaaggccgcggacttccggaaccacgtgatc 437 Query: 473 cagtggttcgaggtgctggacgggctgctggggaggcactgg 514 |||||||||||||||||||||||||||||||| |||||||| Sbjct: 438 cagtggttcgaggtgctggacgggctgctgggccggcactgg 479
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 240 bits (121), Expect = 4e-60 Identities = 172/189 (91%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 7616680 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 7616739 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 7616740 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 7616799 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 7616800 atcctgtacgtggagtacaggaccaggaaggagagggagaaggtggacttcaggaaccat 7616859 Query: 467 gtcatccag 475 ||||||||| Sbjct: 7616860 gtcatccag 7616868 Score = 143 bits (72), Expect = 7e-31 Identities = 144/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Plus Query: 132 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 188 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 7616386 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 7616445 Query: 189 agcaagacggcgcc---ccgagcaccgcanagtcgcggctctccggcctcctgtggcacg 245 |||| ||||||| | || ||||||||| |||| |||||||||||||| || ||||||| Sbjct: 7616446 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 7616505 Query: 246 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 292 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 7616506 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 7616552 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 473 cagtggttcgaggtgctggacgggctgctggggaggcactggaggaacgtcggcc 527 ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 7616977 cagtggttcgaggtgctggacggcctgctggggaggcattggagaaacgtcggcc 7617031
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 240 bits (121), Expect = 4e-60 Identities = 172/189 (91%) Strand = Plus / Minus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 98610 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 98551 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 98550 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 98491 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 98490 atcctgtacgtggagtacaggaccaggaaggagagggagaaggtggacttcaggaaccat 98431 Query: 467 gtcatccag 475 ||||||||| Sbjct: 98430 gtcatccag 98422 Score = 143 bits (72), Expect = 7e-31 Identities = 144/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Minus Query: 132 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 188 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 98904 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 98845 Query: 189 agcaagacggcgcc---ccgagcaccgcanagtcgcggctctccggcctcctgtggcacg 245 |||| ||||||| | || ||||||||| |||| |||||||||||||| || ||||||| Sbjct: 98844 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 98785 Query: 246 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 292 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 98784 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 98738 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 473 cagtggttcgaggtgctggacgggctgctggggaggcactggaggaacgtcggcc 527 ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 98313 cagtggttcgaggtgctggacggcctgctggggaggcattggagaaacgtcggcc 98259
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 4e-60 Identities = 172/189 (91%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 7614515 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 7614574 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 7614575 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 7614634 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 7614635 atcctgtacgtggagtacaggaccaggaaggagagggagaaggtggacttcaggaaccat 7614694 Query: 467 gtcatccag 475 ||||||||| Sbjct: 7614695 gtcatccag 7614703 Score = 143 bits (72), Expect = 7e-31 Identities = 144/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Plus Query: 132 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 188 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 7614221 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 7614280 Query: 189 agcaagacggcgcc---ccgagcaccgcanagtcgcggctctccggcctcctgtggcacg 245 |||| ||||||| | || ||||||||| |||| |||||||||||||| || ||||||| Sbjct: 7614281 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 7614340 Query: 246 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 292 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 7614341 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 7614387 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 473 cagtggttcgaggtgctggacgggctgctggggaggcactggaggaacgtcggcc 527 ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 7614812 cagtggttcgaggtgctggacggcctgctggggaggcattggagaaacgtcggcc 7614866
>dbj|AK111849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145B14, full insert sequence Length = 1961 Score = 194 bits (98), Expect = 2e-46 Identities = 170/194 (87%) Strand = Plus / Plus Query: 231 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 290 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 307 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 366 Query: 291 tggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggca 350 |||| |||||||||||||| |||| |||||||||||||| || |||||| | ||| Sbjct: 367 tggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcc 426 Query: 351 tactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcc 410 | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 427 tgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagcgtcc 486 Query: 411 tctacgtggagtac 424 ||||||| |||||| Sbjct: 487 tctacgtcgagtac 500
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 192 bits (97), Expect = 8e-46 Identities = 217/257 (84%) Strand = Plus / Minus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 15575 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 15516 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 15515 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 15456 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 15455 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 15396 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 15395 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 15336 Query: 459 ggaaccatgtcatccag 475 | ||||| ||||||||| Sbjct: 15335 gcaaccacgtcatccag 15319 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 472 ccagtggttcgaggtgctggacgggctgctggggaggcactggaggaa 519 ||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 15114 ccagtggtttgaggtgctggatgggctactggggaggcactggaggaa 15067
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 192 bits (97), Expect = 8e-46 Identities = 217/257 (84%) Strand = Plus / Minus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 2834543 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 2834484 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 2834483 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 2834424 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 2834423 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 2834364 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 2834363 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 2834304 Query: 459 ggaaccatgtcatccag 475 | ||||| ||||||||| Sbjct: 2834303 gcaaccacgtcatccag 2834287 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 472 ccagtggttcgaggtgctggacgggctgctggggaggcactggaggaa 519 ||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 2834082 ccagtggtttgaggtgctggatgggctactggggaggcactggaggaa 2834035 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 21775691 ggagagggagaaggccgact 21775672
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 192 bits (97), Expect = 8e-46 Identities = 217/257 (84%) Strand = Plus / Minus Query: 219 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 278 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 2834494 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 2834435 Query: 279 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 338 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 2834434 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 2834375 Query: 339 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 398 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 2834374 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 2834315 Query: 399 tcatcagcatcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttca 458 ||||||||||||||||| | |||||| | ||| | |||||| | || |||| ||||||| Sbjct: 2834314 tcatcagcatcctctacctcgagtaccgcacccgcaaggagcgcgacaaggtcgacttcc 2834255 Query: 459 ggaaccatgtcatccag 475 | ||||| ||||||||| Sbjct: 2834254 gcaaccacgtcatccag 2834238 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 472 ccagtggttcgaggtgctggacgggctgctggggaggcactggaggaa 519 ||||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 2834033 ccagtggtttgaggtgctggatgggctactggggaggcactggaggaa 2833986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 21787354 ggagagggagaaggccgact 21787335
>ref|NM_190667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 170 bits (86), Expect = 3e-39 Identities = 221/266 (83%) Strand = Plus / Plus Query: 239 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 298 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 151 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 210 Query: 299 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 358 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 211 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 270 Query: 359 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 418 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 271 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 330 Query: 419 gagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcatccagtgg 478 |||||| | || | ||||||| ||| | | ||||| |||||| |||||||||||| Sbjct: 331 gagtaccgctcccgcaaggagaaggaaggcgtcagcttcaagaaccacgtcatccagtgg 390 Query: 479 ttcgaggtgctggacgggctgctggg 504 |||||||||||||| ||||| ||||| Sbjct: 391 ttcgaggtgctggatgggctactggg 416
>dbj|AK103239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123G17, full insert sequence Length = 1968 Score = 170 bits (86), Expect = 3e-39 Identities = 221/266 (83%) Strand = Plus / Plus Query: 239 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 298 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 277 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 336 Query: 299 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 358 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 337 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 396 Query: 359 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 418 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 397 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 456 Query: 419 gagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcatccagtgg 478 |||||| | || | ||||||| ||| | | ||||| |||||| |||||||||||| Sbjct: 457 gagtaccgctcccgcaaggagaaggaaggcgtcagcttcaagaaccacgtcatccagtgg 516 Query: 479 ttcgaggtgctggacgggctgctggg 504 |||||||||||||| ||||| ||||| Sbjct: 517 ttcgaggtgctggatgggctactggg 542
>dbj|AK100090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J03, full insert sequence Length = 2409 Score = 170 bits (86), Expect = 3e-39 Identities = 221/266 (83%) Strand = Plus / Plus Query: 239 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 298 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 685 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 744 Query: 299 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 358 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 745 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 804 Query: 359 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 418 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 805 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 864 Query: 419 gagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcatccagtgg 478 |||||| | || | ||||||| ||| | | ||||| |||||| |||||||||||| Sbjct: 865 gagtaccgctcccgcaaggagaaggaaggcgtcagcttcaagaaccacgtcatccagtgg 924 Query: 479 ttcgaggtgctggacgggctgctggg 504 |||||||||||||| ||||| ||||| Sbjct: 925 ttcgaggtgctggatgggctactggg 950
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 38539 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 38480 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 38479 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 38420 Query: 407 atcctctacgtggagtac 424 |||||||||| |||||| Sbjct: 38419 gtcctctacgtcgagtac 38402 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 231 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 290 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 38658 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 38599 Query: 291 t 291 | Sbjct: 38598 t 38598
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 21786130 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 21786071 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 21786070 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 21786011 Query: 407 atcctctacgtggagtac 424 |||||||||| |||||| Sbjct: 21786010 gtcctctacgtcgagtac 21785993 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 231 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 290 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 21786249 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 21786190 Query: 291 t 291 | Sbjct: 21786189 t 21786189
>dbj|AK111659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H06, full insert sequence Length = 2264 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 666 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 725 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 726 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 785 Query: 407 atcctctacgtggagtac 424 |||||||||| |||||| Sbjct: 786 gtcctctacgtcgagtac 803 Score = 89.7 bits (45), Expect = 9e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 231 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 290 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 547 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 606 Query: 291 t 291 | Sbjct: 607 t 607
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 113 bits (57), Expect = 6e-22 Identities = 171/209 (81%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 89675 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 89734 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 89735 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 89794 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 | |||||||| |||||| |||| || |||| | || |||| |||||| | |||||| Sbjct: 89795 gtgctctacgtcgagtaccggacgcggcgggagcgcgacaaggtggacttccgcaaccat 89854 Query: 467 gtcatccagtggttcgaggtgctggacgg 495 ||||||||||||||||||||||| ||||| Sbjct: 89855 gtcatccagtggttcgaggtgctcgacgg 89883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 225 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 284 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 89522 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 89581 Query: 285 accaggt 291 ||||||| Sbjct: 89582 accaggt 89588
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 113 bits (57), Expect = 6e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 3324619 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 3324560 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 3324559 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 3324500 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 | |||||||| |||||| |||| || |||| | || |||| |||||| | |||||| Sbjct: 3324499 gtgctctacgtcgagtaccggacgcggcgggagcgcgacaaggtggacttccgcaaccat 3324440 Query: 467 gtcatccagtggttcgaggtgctggacgg 495 ||||||||||||||||||||||| ||||| Sbjct: 3324439 gtcatccagtggttcgaggtgctcgacgg 3324411 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 225 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 284 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 3324772 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 3324713 Query: 285 accaggt 291 ||||||| Sbjct: 3324712 accaggt 3324706
>gb|AF522029.1| Momordica charantia auxin influx carrier-like protein 2 (AIC2) mRNA, complete cds Length = 2787 Score = 113 bits (57), Expect = 6e-22 Identities = 219/273 (80%) Strand = Plus / Plus Query: 232 cctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 291 |||||| ||||||||||||||||||| |||||||||||||||||||| ||||| || || Sbjct: 766 cctcctctggcacggcggctccgcctgggacgcctggttcagctgcgcctccaatcaagt 825 Query: 292 ggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcat 351 ||| |||||||| | || |||| ||||| || ||||| || || ||| || ||| || Sbjct: 826 ggctcaggtgcttttaacgctgccgtactcattttcgcagctcggaatgctgtccggaat 885 Query: 352 actgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcct 411 || ||||| |||||||||| || || || |||||||| || || | |||||| | || Sbjct: 886 cctattccaaatcttctacgggctgatcggaagctggacggcgtatttgatcagcgttct 945 Query: 412 ctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcat 471 ||| | |||||||| | ||||| |||||||||||| | | ||| | ||||||||||| Sbjct: 946 gtacatagagtacagaagcaggagggagagggagaacgtcagctttaaaaaccatgtcat 1005 Query: 472 ccagtggttcgaggtgctggacgggctgctggg 504 ||||||||||| |||||||| ||||| ||||| Sbjct: 1006 tcagtggttcgaagtgctggatgggcttctggg 1038
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 113 bits (57), Expect = 6e-22 Identities = 171/209 (81%) Strand = Plus / Minus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 3333324 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 3333265 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 3333264 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 3333205 Query: 407 atcctctacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccat 466 | |||||||| |||||| |||| || |||| | || |||| |||||| | |||||| Sbjct: 3333204 gtgctctacgtcgagtaccggacgcggcgggagcgcgacaaggtggacttccgcaaccat 3333145 Query: 467 gtcatccagtggttcgaggtgctggacgg 495 ||||||||||||||||||||||| ||||| Sbjct: 3333144 gtcatccagtggttcgaggtgctcgacgg 3333116 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 225 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 284 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 3333477 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 3333418 Query: 285 accaggt 291 ||||||| Sbjct: 3333417 accaggt 3333411
>gb|AY109327.1| Zea mays CL468_1 mRNA sequence Length = 2907 Score = 107 bits (54), Expect = 4e-20 Identities = 105/122 (86%) Strand = Plus / Plus Query: 383 agctggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagg 442 ||||||||||| |||||||||||| |||||||||| |||||| | || | ||||||| | Sbjct: 1041 agctggaccgcgtacctcatcagcgtcctctacgtcgagtaccgctcccgcaaggagaag 1100 Query: 443 gagaaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctg 502 ||| | | ||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1101 gagggcgtcagcttcaagaaccacgtcatccagtggttcgaggtgctggacgggctgctg 1160 Query: 503 gg 504 || Sbjct: 1161 gg 1162 Score = 79.8 bits (40), Expect = 8e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 231 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 290 |||| ||||||||||||||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 889 gcctgctgtggcacggcggctccgtctgggacgcgtggttcagctgcgcctccaaccagg 948 Query: 291 tggc 294 |||| Sbjct: 949 tggc 952
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 ||||| || |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 36992606 caggtcgcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 36992665 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 ||| | ||| | ||||| |||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 36992666 ggcgtgctgctgcagctgttctacggtttcatgggcagctggaccgcctacctaatcagc 36992725 Query: 407 atcctctacgtggagtac 424 |||||||||| |||||| Sbjct: 36992726 gtcctctacgtcgagtac 36992743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 239 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 291 |||||||||||||||| || |||||||||||||||||||| || |||||||| Sbjct: 36992426 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggt 36992478 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 473 cagtggttcgaggtgctggacgggctgctggg 504 |||||||||||||||||||| ||||| ||||| Sbjct: 36993212 cagtggttcgaggtgctggatgggctactggg 36993243
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 287 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 346 ||||| || |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 82910 caggtcgcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 82969 Query: 347 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 406 ||| | ||| | ||||| |||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 82970 ggcgtgctgctgcagctgttctacggtttcatgggcagctggaccgcctacctaatcagc 83029 Query: 407 atcctctacgtggagtac 424 |||||||||| |||||| Sbjct: 83030 gtcctctacgtcgagtac 83047 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 239 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 291 |||||||||||||||| || |||||||||||||||||||| || |||||||| Sbjct: 82730 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggt 82782 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 473 cagtggttcgaggtgctggacgggctgctggg 504 |||||||||||||||||||| ||||| ||||| Sbjct: 83516 cagtggttcgaggtgctggatgggctactggg 83547
>ref|NM_127675.2| Arabidopsis thaliana amino acid permease/ transporter AT2G21050 mRNA, complete cds Length = 1848 Score = 83.8 bits (42), Expect = 5e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 266 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 325 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 335 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 394 Query: 326 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 385 || || ||||||||| | || || ||||| |||||||| || ||| || | || || Sbjct: 395 tcacagctggggatgctctcagggattctgtttcagctcttttatggcatcttaggtagt 454 Query: 386 tggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagggag 445 ||||| || ||||||||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct: 455 tggactgcttacctcatcagtattctctatgttgaatacagaaccagaaaggaaagagag 514 Query: 446 aaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctgggg 505 || | ||||||| ||||||||||| |||||||| ||||| || || || |||| ||| Sbjct: 515 aaagttaacttcagaaaccatgtcattcagtggtttgaggttcttgatggattgcttggg 574 Query: 506 aggcactggaggaa 519 | ||| |||||||| Sbjct: 575 aagcattggaggaa 588
>gb|AY128714.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050) mRNA, complete cds Length = 1541 Score = 83.8 bits (42), Expect = 5e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 266 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 325 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 136 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 195 Query: 326 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 385 || || ||||||||| | || || ||||| |||||||| || ||| || | || || Sbjct: 196 tcacagctggggatgctctcagggattctgtttcagctcttttatggcatcttaggtagt 255 Query: 386 tggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagggag 445 ||||| || ||||||||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct: 256 tggactgcttacctcatcagtattctctatgttgaatacagaaccagaaaggaaagagag 315 Query: 446 aaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctgggg 505 || | ||||||| ||||||||||| |||||||| ||||| || || || |||| ||| Sbjct: 316 aaagttaacttcagaaaccatgtcattcagtggtttgaggttcttgatggattgcttggg 375 Query: 506 aggcactggaggaa 519 | ||| |||||||| Sbjct: 376 aagcattggaggaa 389
>gb|AY054684.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050; F26H11.19) mRNA, complete cds Length = 1724 Score = 83.8 bits (42), Expect = 5e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 266 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 325 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 170 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 229 Query: 326 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 385 || || ||||||||| | || || ||||| |||||||| || ||| || | || || Sbjct: 230 tcacagctggggatgctctcagggattctgtttcagctcttttatggcatcttaggtagt 289 Query: 386 tggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagggag 445 ||||| || ||||||||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct: 290 tggactgcttacctcatcagtattctctatgttgaatacagaaccagaaaggaaagagag 349 Query: 446 aaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctgggg 505 || | ||||||| ||||||||||| |||||||| ||||| || || || |||| ||| Sbjct: 350 aaagttaacttcagaaaccatgtcattcagtggtttgaggttcttgatggattgcttggg 409 Query: 506 aggcactggaggaa 519 | ||| |||||||| Sbjct: 410 aagcattggaggaa 423
>emb|BX819654.1|CNS0AA21 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1827 Score = 83.8 bits (42), Expect = 5e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 266 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 325 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 152 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 211 Query: 326 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 385 || || ||||||||| | || || ||||| |||||||| || ||| || | || || Sbjct: 212 tcacagctggggatgctctcagggattctgtttcagctcttttatggcatcttaggtagt 271 Query: 386 tggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagggag 445 ||||| || ||||||||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct: 272 tggactgcttacctcatcagtattctctatgttgaatacagaaccagaaaggaaagagag 331 Query: 446 aaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctgggg 505 || | ||||||| ||||||||||| |||||||| ||||| || || || |||| ||| Sbjct: 332 aaagttaacttcagaaaccatgtcattcagtggtttgaggttcttgatggattgcttggg 391 Query: 506 aggcactggaggaa 519 | ||| |||||||| Sbjct: 392 aagcattggaggaa 405
>gb|AF522030.1| Momordica charantia auxin influx carrier-like protein 3 (AIC3) mRNA, complete cds Length = 2025 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 263 gcctggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactcc 322 ||||||||||||||||| || || ||||| ||||| || || || || |||||||||| Sbjct: 583 gcctggttcagctgcgcctcaaatcaggttgcccaagttctgcttactctgccctactct 642 Query: 323 ttctcgcaactggggatg 340 ||||| |||||||||||| Sbjct: 643 ttctctcaactggggatg 660 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 430 caggaaggagagggagaaggccgacttcaggaaccatgtcatccagtggttcgaggtgct 489 ||||||||||| |||||| | ||||| ||||||||||||||||||||| || ||||| Sbjct: 750 caggaaggagaaggagaatgttagcttcaagaaccatgtcatccagtggtttgaagtgct 809 Query: 490 gga 492 ||| Sbjct: 810 gga 812
>gb|AF522028.1| Momordica charantia auxin influx carrier-like protein 1 (AIC1) mRNA, complete cds Length = 1866 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 263 gcctggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactcc 322 ||||||||||||||||| || || ||||| ||||| || || || || |||||||||| Sbjct: 253 gcctggttcagctgcgcctcaaatcaggttgcccaagttctgcttactctgccctactct 312 Query: 323 ttctcgcaactggggatg 340 ||||| |||||||||||| Sbjct: 313 ttctctcaactggggatg 330 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 430 caggaaggagagggagaaggccgacttcaggaaccatgtcatccagtggttcgaggtgct 489 ||||||||||| |||||| | ||||| ||||||||||||||||||||| || ||||| Sbjct: 420 caggaaggagaaggagaatgttagcttcaagaaccatgtcatccagtggtttgaagtgct 479 Query: 490 gga 492 ||| Sbjct: 480 gga 482
>gb|AY864733.1| Populus tomentosa auxin influx protein (AUX1) mRNA, complete cds Length = 1760 Score = 58.0 bits (29), Expect = 3e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 380 gggagctggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggag 439 ||||||||||| || |||||||| ||| | || ||| | |||||||| | ||| |||| | Sbjct: 326 gggagctggacagcttacctcataagcgtgctttacattgagtacagaagcagaaagggg 385 Query: 440 agggagaaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctg 499 | ||||| | |||||| |||||||||||| |||||||| || ||||| || |||||| Sbjct: 386 aaagagaacgttaacttcaagaaccatgtcatacagtggtttgaagtgcttgatgggctg 445 Query: 500 ctggg 504 ||||| Sbjct: 446 ctggg 450
>gb|AF115543.1| Populus tremula x Populus tremuloides AUX1-like protein (LAX1) mRNA, complete cds Length = 1811 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 383 agctggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagg 442 |||||||| || |||||||| ||| | || ||| | |||||||| | ||| ||||||| Sbjct: 337 agctggacagcttacctcataagcgtgctttacattgagtacagaagcagaaaggagaaa 396 Query: 443 gagaaggccgacttcaggaaccatgtcatccagtggttcgaggtgctggacgggctgctg 502 ||||| | |||||| |||||||||||| |||||||| || ||||| || ||||| ||| Sbjct: 397 gagaacgttaacttcaagaaccatgtcatacagtggtttgaagtgcttgatgggctcctg 456 Query: 503 gg 504 || Sbjct: 457 gg 458
>gb|AF263100.1| Populus tremula x Populus tremuloides putative AUX1-like permease (lax3) mRNA, complete cds Length = 1952 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 455 ttcaggaaccatgtcatccagtggtt 480 |||||||||||||||||||||||||| Sbjct: 449 ttcaggaaccatgtcatccagtggtt 474
>dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46K10, TM0112, complete sequence Length = 103522 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 422 tacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcatccag 475 ||||| |||||||| ||||| || ||||| | ||||||||||||||||||||| Sbjct: 89517 tacagaaccaggaaagagagagaaaaggctaatttcaggaaccatgtcatccag 89570
>emb|AM235386.1| Dianthus caryophyllus mRNA for auxin influx carrier (aux1 gene) Length = 1521 Score = 50.1 bits (25), Expect = 0.007 Identities = 109/137 (79%) Strand = Plus / Plus Query: 266 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 325 |||||||| ||| |||| ||||| ||||| || ||| | || || ||||| ||||| ||| Sbjct: 174 tggttcagttgctcttctaaccaagtggcgcaagtgttgctaactttgccgtactcgttc 233 Query: 326 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 385 |||||| |||||||| | ||| ||| | | ||| | ||||||||| | |||||||| Sbjct: 234 tcgcaattggggatgttatccggaatagtactgcagatattctacggctttttggggagc 293 Query: 386 tggaccgcctacctcat 402 |||||||| |||||||| Sbjct: 294 tggaccgcgtacctcat 310
>gb|AY553235.1| Leptosphaeria maculans HDX1 (HDX1), PKS1 (PKS1), and UVI-1h (UVI-1h) genes, complete cds; sirodesmin biosynthetic gene cluster, complete sequence; MP1 (MP1), and ZnF3 (ZnF3) genes, complete cds Length = 68683 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 gatggcctcgccgacgagaaggc 150 ||||||||||||||||||||||| Sbjct: 51175 gatggcctcgccgacgagaaggc 51153
>gb|AY437642.2| Leptosphaeria maculans ATP binding cassette transporter (ABCt4) and hypothetical protein genes, complete cds Length = 7312 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 128 gatggcctcgccgacgagaaggc 150 ||||||||||||||||||||||| Sbjct: 1619 gatggcctcgccgacgagaaggc 1597
>gb|AC006264.4| Arabidopsis thaliana chromosome 2 clone F26H11 map mi148, complete sequence Length = 93220 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Minus Query: 353 ctgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctc 412 ||||| |||||||| || ||| || | || || ||||| || ||||||||||| || ||| Sbjct: 60442 ctgtttcagctcttttatggcatcttaggtagttggactgcttacctcatcagtattctc 60383 Query: 413 tacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcat 471 || || || ||||| ||||| ||||| || ||||| | ||||||| ||||||||||| Sbjct: 60382 tatgttgaatacagaaccagaaaggaaagagagaaagttaacttcagaaaccatgtcat 60324
>emb|AJ243221.1|ATH243221 Arabidopsis thaliana LAX2 gene for putative AUX1-like permease, exons 1 to 6 Length = 2573 Score = 46.1 bits (23), Expect = 0.12 Identities = 95/119 (79%) Strand = Plus / Plus Query: 353 ctgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctc 412 ||||| |||||||| || ||| || | || || ||||| || ||||||||||| || ||| Sbjct: 484 ctgtttcagctcttttatggcatcttaggtagttggactgcttacctcatcagtattctc 543 Query: 413 tacgtggagtacaggaccaggaaggagagggagaaggccgacttcaggaaccatgtcat 471 || || || ||||| ||||| ||||| || ||||| | ||||||| ||||||||||| Sbjct: 544 tatgttgaatacagaaccagaaaggaaagagagaaagttaacttcagaaaccatgtcat 602
>emb|AJ862887.1| Prunus avium mRNA for putative auxin influx carrier protein (lax1 gene) Length = 2004 Score = 44.1 bits (22), Expect = 0.46 Identities = 79/98 (80%) Strand = Plus / Plus Query: 383 agctggaccgcctacctcatcagcatcctctacgtggagtacaggaccaggaaggagagg 442 |||||||| || ||||| ||||| | |||||| | |||||||| | ||||||||||| Sbjct: 560 agctggacggcttacctgatcagtgtgctctacatagagtacagaagcaggaaggagaaa 619 Query: 443 gagaaggccgacttcaggaaccatgtcatccagtggtt 480 ||||| | |||||| |||||| || ||||||||||| Sbjct: 620 gagaacgtaaacttcaagaaccacgttatccagtggtt 657
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 482 gaggtgctggacgggctgctgg 503 |||||||||||||||||||||| Sbjct: 6443385 gaggtgctggacgggctgctgg 6443364 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gaccaggaaggagagggaga 446 |||||||||||||||||||| Sbjct: 7277950 gaccaggaaggagagggaga 7277931
>dbj|AB085896.1| Cucumis sativus CS-AUX1 mRNA for AUX1-like auxin transport protein, complete cds Length = 2121 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 430 caggaaggagagggagaaggccgacttcaggaaccatgtcatccagtggttcga 483 ||||||||||| |||||| | |||||| ||||||||||| ||||||||||| Sbjct: 658 caggaaggagaaggagaatgttaacttcaaaaaccatgtcattcagtggttcga 711 Score = 40.1 bits (20), Expect = 7.1 Identities = 59/72 (81%) Strand = Plus / Plus Query: 232 cctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 291 |||||| |||||||||||||| || | || || ||||| || || ||||| ||||| || Sbjct: 460 cctcctctggcacggcggctctgcttgggatgcttggtttagttgtgcttcaaaccaagt 519 Query: 292 ggcccaggtgct 303 ||| |||||||| Sbjct: 520 ggctcaggtgct 531
>ref|NM_129368.2| Arabidopsis thaliana AUX1 (AUXIN RESISTANT 1); amino acid permease/ transporter AT2G38120 (AUX1) mRNA, complete cds Length = 2135 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 293 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 411 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 470 Query: 294 c 294 | Sbjct: 471 c 471
>gb|AY093300.1| Arabidopsis thaliana unknown protein (At2g38120) mRNA, complete cds Length = 1638 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 293 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 122 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 181 Query: 294 c 294 | Sbjct: 182 c 182
>gb|AY054488.1| Arabidopsis thaliana Unknown protein (At2g38120; F16M14.5) mRNA, complete cds Length = 2068 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 293 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 411 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 470 Query: 294 c 294 | Sbjct: 471 c 471
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 ggaccaggaaggagagggagaaggc 450 |||||| |||||||||||||||||| Sbjct: 15808659 ggaccacgaaggagagggagaaggc 15808683
>gb|AY087092.1| Arabidopsis thaliana clone 31586 mRNA, complete sequence Length = 2047 Score = 42.1 bits (21), Expect = 1.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 234 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 293 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 406 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 465 Query: 294 c 294 | Sbjct: 466 c 466
>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1342_D02 Length = 125460 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 ggaccaggaaggagagggagaaggc 450 |||||| |||||||||||||||||| Sbjct: 66599 ggaccacgaaggagagggagaaggc 66623
>dbj|AK067299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104E03, full insert sequence Length = 3389 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 ggaccaggaaggagagggagaaggc 450 |||||| |||||||||||||||||| Sbjct: 265 ggaccacgaaggagagggagaaggc 241
>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete sequence Length = 178735 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 accaggaaggagagggagaag 448 ||||||||||||||||||||| Sbjct: 95521 accaggaaggagagggagaag 95541
>ref|NM_197777.1| Oryza sativa (japonica cultivar-group) protein kinase REK (OSJNBa0027P10.6), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 810 ggagagggagaaggccgact 829
>gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, complete sequence Length = 195322 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 gaccaggaaggagagggagaaggc 450 |||||||||||||| ||||||||| Sbjct: 169178 gaccaggaaggagatggagaaggc 169155
>gb|AC116472.14| Mus musculus chromosome 7, clone RP23-384B23, complete sequence Length = 216191 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 gaccaggaaggagagggagaaggc 450 |||||||||||||| ||||||||| Sbjct: 207172 gaccaggaaggagatggagaaggc 207195
>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence Length = 177675 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 accaggaaggagagggagaa 447 |||||||||||||||||||| Sbjct: 89305 accaggaaggagagggagaa 89286
>gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome 16, complete sequence Length = 240181 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 aggaccaggaaggagagggagaag 448 |||||||||||||||| ||||||| Sbjct: 151082 aggaccaggaaggagaaggagaag 151059
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gagtgaccatggccgcagca 121 |||||||||||||||||||| Sbjct: 5128973 gagtgaccatggccgcagca 5128992
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 gtggcccaggtgctcctgaccttg 313 |||||||||||||| ||||||||| Sbjct: 4482949 gtggcccaggtgctgctgaccttg 4482972
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tgaccttgccctactccttc 325 |||||||||||||||||||| Sbjct: 2990748 tgaccttgccctactccttc 2990767
>gb|AC160148.7| Mus musculus 6 BAC RP23-384N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207306 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggagagggagaaggccgac 454 |||||||||||||||||||| Sbjct: 5142 aggagagggagaaggccgac 5123
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 90374 ggagagggagaaggccgact 90355
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 aggaaggagagggagaaggc 450 |||||||||||||||||||| Sbjct: 1051653 aggaaggagagggagaaggc 1051634
>dbj|AB125304.1| Oryza sativa (japonica cultivar-group) SAPK3 mRNA for serine/threonine protein kinase SAPK3, complete cds Length = 1304 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 930 ggagagggagaaggccgact 949
>dbj|AK103690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136G23, full insert sequence Length = 1304 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 930 ggagagggagaaggccgact 949
>dbj|AK059800.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F10, full insert sequence Length = 1189 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 676 ggagagggagaaggccgact 695
>gb|AC155848.6| Mus musculus 6 BAC RP24-534P19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202657 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aggagagggagaaggccgac 454 |||||||||||||||||||| Sbjct: 177413 aggagagggagaaggccgac 177394
>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aggagatggagcaagacggc 199 |||||||||||||||||||| Sbjct: 23723 aggagatggagcaagacggc 23742
>dbj|AB002109.1| Oryza sativa DNA for protein kinase, complete cds Length = 3678 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 3332 ggagagggagaaggccgact 3351
>emb|AL359234.4|CNS05TEL Human chromosome 14 DNA sequence BAC C-2184N20 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 115087 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aggagatggagcaagacggc 199 |||||||||||||||||||| Sbjct: 10137 aggagatggagcaagacggc 10118
>dbj|D88399.1| Oryza sativa mRNA for endosperm kinase, complete cds Length = 1186 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggagagggagaaggccgact 455 |||||||||||||||||||| Sbjct: 810 ggagagggagaaggccgact 829 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,754,164 Number of Sequences: 3902068 Number of extensions: 3754164 Number of successful extensions: 85872 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85171 Number of HSP's gapped (non-prelim): 690 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
