ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (... 319 2e-84
2emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 252 4e-64
3dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRN... 244 1e-61
4dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 1e-61
5dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 1e-61
6gb|AY104952.1| Zea mays PCO092342 mRNA sequence 228 6e-57
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 4e-24
8gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 119 4e-24
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 4e-24
10ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 ... 100 4e-18
11ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G464... 100 4e-18
12gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-de... 100 4e-18
13gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-de... 100 4e-18
14emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Co... 100 4e-18
15emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Co... 100 4e-18
16emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, B... 84 2e-13
17gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete s... 80 4e-12
18ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID ... 78 1e-11
19gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, co... 78 1e-11
20gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, co... 78 1e-11
21emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Co... 78 1e-11
22gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete se... 78 1e-11
23gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarbox... 78 1e-11
24dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 66 5e-08
25gb|AY619951.1| Nicotiana tabacum putative UDP-glucuronate decarb... 62 8e-07
26gb|AF355468.1|AF355468 Saccharopolyspora spinosa DTDP-glucose 4,... 56 5e-05
27dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate ca... 54 2e-04
28gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence 50 0.003
29emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4... 50 0.003
30dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 50 0.003
31dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 48 0.012
32emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.049
33emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 46 0.049
34emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 46 0.049
35gb|AE012490.1| Xanthomonas campestris pv. campestris str. ATCC 3... 46 0.049
36gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 46 0.049
37gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 46 0.049
38gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.19
39gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 44 0.19
40dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 0.76
41gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 3.0
42dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 3.0 
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA,
           complete cds
          Length = 1433

 Score =  319 bits (161), Expect = 2e-84
 Identities = 183/193 (94%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 151 ttctccaagttcttccaggccaacatgcggatcctggtcaccggcggagctggcttcatc 210

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggctcgcacctcgtcgacaagctcatggagaacgagaagaacgaggtcattgttgctgac 270

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 271 aactttttcactggttcaaaagacaacctgaagaagtggatcggccacccaagatttgag 330

                        
Query: 223 ctcatccntcacg 235
           ||||||| |||||
Sbjct: 331 ctcatccgtcacg 343
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>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score =  252 bits (127), Expect = 4e-64
 Identities = 173/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||||| |||  || ||||||||||||||||||| ||  | |||||||||
Sbjct: 317 ttctccaagttcttccaggcgaacctgcggatcctggtcaccggtggggcgggcttcatc 376

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 377 ggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtcattgttgctgat 436

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 437 aactttttcactggttcaaaagacaacttgaagaagtggatcggccacccaagatttgag 496

                      
Query: 223 ctcatccntca 233
           ||||||| |||
Sbjct: 497 ctcatccgtca 507
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>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for
           UDP-glucuronic acid decarboxylase, complete cds
          Length = 1053

 Score =  244 bits (123), Expect = 1e-61
 Identities = 172/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||||| |||  || || ||||||| |||||||||||| |||||||||||
Sbjct: 79  ttctccaagttcttccaggcgaacctgaggatcctcgtcaccggcggagctggcttcatc 138

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||||||| |||||||||||||||||||| ||||||||||||| || |||
Sbjct: 139 ggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtcattgtcgcagac 198

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 199 aactttttcactggttcaaaagacaacctgaagaagtggatcggacacccaagatttgag 258

                      
Query: 223 ctcatccntca 233
           || |||| |||
Sbjct: 259 ctaatccgtca 269
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>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
           insert sequence
          Length = 1811

 Score =  244 bits (123), Expect = 1e-61
 Identities = 172/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||||| |||  || || ||||||| |||||||||||| |||||||||||
Sbjct: 567 ttctccaagttcttccaggcgaacctgaggatcctcgtcaccggcggagctggcttcatc 626

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||||||| |||||||||||||||||||| ||||||||||||| || |||
Sbjct: 627 ggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtcattgtcgcagac 686

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 687 aactttttcactggttcaaaagacaacctgaagaagtggatcggacacccaagatttgag 746

                      
Query: 223 ctcatccntca 233
           || |||| |||
Sbjct: 747 ctaatccgtca 757
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>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
           insert sequence
          Length = 1411

 Score =  244 bits (123), Expect = 1e-61
 Identities = 172/191 (90%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||||| |||  || || ||||||| |||||||||||| |||||||||||
Sbjct: 178 ttctccaagttcttccaggcgaacctgaggatcctcgtcaccggcggagctggcttcatc 237

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||||||| |||||||||||||||||||| ||||||||||||| || |||
Sbjct: 238 ggctcgcacctcgtcgacaagctcatggagaacgagaagcacgaggtcattgtcgcagac 297

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 298 aactttttcactggttcaaaagacaacctgaagaagtggatcggacacccaagatttgag 357

                      
Query: 223 ctcatccntca 233
           || |||| |||
Sbjct: 358 ctaatccgtca 368
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>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score =  228 bits (115), Expect = 6e-57
 Identities = 170/191 (89%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctccnagttcttccnggccnacatgcggatcctggtcaccggcggaactggcttcatc 102
           |||||| ||||||| | |||  || |||||||||||||||| || ||  | |||||||||
Sbjct: 561 ttctccaagttctttcaggctaacctgcggatcctggtcactggtggggcgggcttcatc 620

                                                                       
Query: 103 ggctcgcaactcgtcgacnagctcatggagaacgagaagaacgaggtcattgttgctgac 162
           |||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 621 ggctcgcacctcgtagacaagctcatggagaacgagaagcacgaggtcattgttgctgat 680

                                                                       
Query: 163 nactttttcactggttcanaagacaacctgaagaagtggatcggccacccnagatttgag 222
            ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 681 aactttttcactggttcaaaagacaacctgaagaagtggattggccacccaagatttgag 740

                      
Query: 223 ctcatccntca 233
           ||||||| |||
Sbjct: 741 ctcatccgtca 751
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 4e-24
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                           
Query: 146     aggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatcg 205
               |||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9410107 aggtcattgtcgcagacaactttttcactggttcaaaagacaacctgaagaagtggatcg 9410166

                                           
Query: 206     gccacccnagatttgagctcatccntca 233
               | ||||| ||||||||||| |||| |||
Sbjct: 9410167 gacacccaagatttgagctaatccgtca 9410194



 Score =  119 bits (60), Expect = 4e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                           
Query: 71      ggatcctggtcaccggcggaactggcttcatcggctcgcaactcgtcgacnagctcatgg 130
               ||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 9409363 ggatcctcgtcaccggcggagctggcttcatcggctcgcacctcgtcgacaagctcatgg 9409422

                                  
Query: 131     agaacgagaagaacgaggt 149
               ||||||||||| |||||||
Sbjct: 9409423 agaacgagaagcacgaggt 9409441
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score =  119 bits (60), Expect = 4e-24
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                          
Query: 146    aggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatcg 205
              |||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 107507 aggtcattgtcgcagacaactttttcactggttcaaaagacaacctgaagaagtggatcg 107566

                                          
Query: 206    gccacccnagatttgagctcatccntca 233
              | ||||| ||||||||||| |||| |||
Sbjct: 107567 gacacccaagatttgagctaatccgtca 107594



 Score =  119 bits (60), Expect = 4e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                          
Query: 71     ggatcctggtcaccggcggaactggcttcatcggctcgcaactcgtcgacnagctcatgg 130
              ||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 106763 ggatcctcgtcaccggcggagctggcttcatcggctcgcacctcgtcgacaagctcatgg 106822

                                 
Query: 131    agaacgagaagaacgaggt 149
              ||||||||||| |||||||
Sbjct: 106823 agaacgagaagcacgaggt 106841
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 4e-24
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                           
Query: 146     aggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatcg 205
               |||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9408228 aggtcattgtcgcagacaactttttcactggttcaaaagacaacctgaagaagtggatcg 9408287

                                           
Query: 206     gccacccnagatttgagctcatccntca 233
               | ||||| ||||||||||| |||| |||
Sbjct: 9408288 gacacccaagatttgagctaatccgtca 9408315



 Score =  119 bits (60), Expect = 4e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                           
Query: 71      ggatcctggtcaccggcggaactggcttcatcggctcgcaactcgtcgacnagctcatgg 130
               ||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 9407484 ggatcctcgtcaccggcggagctggcttcatcggctcgcacctcgtcgacaagctcatgg 9407543

                                  
Query: 131     agaacgagaagaacgaggt 149
               ||||||||||| |||||||
Sbjct: 9407544 agaacgagaagcacgaggt 9407562
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>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
           variant AT3G46440.1 mRNA, complete cds
          Length = 1374

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 265 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 324

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 325 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 378
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>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
           variant AT3G46440.2 mRNA, complete cds
          Length = 1464

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 355 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 414

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 415 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 468
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>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases
           (At3g46440) mRNA, complete cds
          Length = 1057

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 140 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 199

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 200 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 253
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>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase
           (At3g46440) mRNA, complete cds
          Length = 1356

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 265 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 324

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 325 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 378
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>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZC01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1114

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 89  agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 148

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 149 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 202
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>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1211

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| ||||||||||||| 
Sbjct: 164 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcactggttcaa 223

                                                                 
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntcacg 235
           | |||||||| ||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 224 aggacaaccttaagaagtggattggtcatccaagatttgagcttatccgtcacg 277
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>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15
          Length = 100328

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                         
Query: 146   aggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatcg 205
             |||| |||||||||||  ||| ||||||||||||| | |||||||| ||||||||||| |
Sbjct: 76955 aggtgattgttgctgataactatttcactggttcaaaggacaaccttaagaagtggattg 76896

                                           
Query: 206   gccacccnagatttgagctcatccntcacg 235
             | || || ||||||||||| |||| |||||
Sbjct: 76895 gtcatccaagatttgagcttatccgtcacg 76866
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>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence
          Length = 1281

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| ||||| ||||| ||||| |||||||||||  ||| |||||| |||||| 
Sbjct: 201 agctgatggaaaacgaaaagaatgaggtgattgttgctgataactatttcaccggttcaa 260

                                                               
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttgagctcatccntca 233
           | ||||| || ||||||||||| || || || ||||||||||| |||| |||
Sbjct: 261 aggacaatctcaagaagtggattggtcatccgagatttgagcttatccgtca 312
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>ref|NM_125319.2| Arabidopsis thaliana UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE);
           catalytic AT5G59290 (UXS3) mRNA, complete cds
          Length = 1459

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 289 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 348

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 349 aagaaaacctcaagaagtggatcggtcaccccaggtttga 388
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>gb|AY093958.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds
          Length = 1029

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 143 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 202

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 203 aagaaaacctcaagaagtggatcggtcaccccaggtttga 242
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>gb|AF375442.1| Arabidopsis thaliana AT5g59290/mnc17_180 mRNA, complete cds
          Length = 1364

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 233 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 292

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 293 aagaaaacctcaagaagtggatcggtcaccccaggtttga 332
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>emb|BX832416.1|CNS0A12Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 215 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 274

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 275 aagaaaacctcaagaagtggatcggtcaccccaggtttga 314
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>gb|AY088443.1| Arabidopsis thaliana clone 6701 mRNA, complete sequence
          Length = 1418

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 289 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 348

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 349 aagaaaacctcaagaagtggatcggtcaccccaggtttga 388
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>gb|AF387789.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS3) mRNA,
           complete cds
          Length = 1029

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                       
Query: 122 agctcatggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttcan 181
           |||| ||||| || |||||||| |||||  ||||||||||  ||| ||||||||| ||| 
Sbjct: 143 agcttatggaaaatgagaagaatgaggtggttgttgctgataactatttcactggctcaa 202

                                                   
Query: 182 aagacaacctgaagaagtggatcggccacccnagatttga 221
           |||| ||||| |||||||||||||| ||||| || |||||
Sbjct: 203 aagaaaacctcaagaagtggatcggtcaccccaggtttga 242
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>dbj|AB016890.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC17
          Length = 75803

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 152   ttgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatcggccacc 211
             ||||||||||  ||| ||||||||| ||| |||| ||||| |||||||||||||| ||||
Sbjct: 56672 ttgttgctgataactatttcactggctcaaaagaaaacctcaagaagtggatcggtcacc 56613

                       
Query: 212   cnagatttga 221
             | || |||||
Sbjct: 56612 ccaggtttga 56603
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>gb|AY619951.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 2 mRNA,
           complete cds
          Length = 1519

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 127 atggagaacgagaagaacgaggtcattgttgctgacnactttttcactggttca 180
           |||||||| |||||||| ||||| |||||||  ||| |||||||||||||||||
Sbjct: 360 atggagaatgagaagaatgaggttattgttgtcgacaactttttcactggttca 413
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>gb|AF355468.1|AF355468 Saccharopolyspora spinosa DTDP-glucose 4,6-dehydratase (gdh) and
           DTDP-4-dehydrorhamnose reductase (kre) genes, complete
           cds
          Length = 2311

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 67  atgcggatcctggtcaccggcggaactggcttcatcggctcgca 110
           |||||||| ||||||||||||||| | || ||||||||||||||
Sbjct: 88  atgcggattctggtcaccggcggagccggtttcatcggctcgca 131
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>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase,
           complete cds
          Length = 1406

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                       
Query: 139 aagaacgaggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaag 198
           ||||| |||||||||||||||||  |||  |||||||| ||  | |||||||| || || 
Sbjct: 287 aagaatgaggtcattgttgctgataactacttcactggatcgaaggacaacctcaaaaaa 346

                                              
Query: 199 tggatcggccacccnagatttgagctcatccntca 233
           ||||| || || || ||||||||||| |||| |||
Sbjct: 347 tggattggtcatccaagatttgagcttatccgtca 381
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>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 199 tggatcggccacccnagatttgagctcatccntca 233
           ||||| |||||||| |||||||||||||||| |||
Sbjct: 1   tggattggccacccaagatttgagctcatccgtca 35
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>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase
          Length = 1356

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 145 gaggtcattgttgctgacnactttttcactggttcanaagacaacctgaagaagtggatc 204
           |||||||||||||| ||  |||  |||||||| ||| | |||||||| || || ||||| 
Sbjct: 233 gaggtcattgttgcggataactacttcactggatcaaaggacaacctcaaaaaatggatt 292

                                        
Query: 205 ggccacccnagatttgagctcatccntca 233
           || || || ||||||||||| |||| |||
Sbjct: 293 ggtcatccaagatttgagcttatccgtca 321
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 66      catgcggatcctggtcaccggcggaactggcttcatcggctcgca 110
               |||||| || ||||| ||||||||| | |||||||||||||||||
Sbjct: 2330208 catgcgcatactggttaccggcggagcgggcttcatcggctcgca 2330164
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 74      tcctggtcaccggcggaactggcttcatcggc 105
               ||||||| ||||||||||| ||||||||||||
Sbjct: 1518305 tcctggtgaccggcggaacgggcttcatcggc 1518336



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 75      cctggtcaccggcggaactggcttcatcggctcgca 110
               |||||| |||||||  || |||||||||||||||||
Sbjct: 3034371 cctggtaaccggcgccaccggcttcatcggctcgca 3034336
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>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 67    atgcggatcctggtcaccggcggaactggcttcatcggc 105
             ||||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 75766 atgcgtatccttgtcatcggcggaaccggcttcatcggc 75728
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>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 67    atgcggatcctggtcaccggcggaactggcttcatcggc 105
             ||||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 28571 atgcgtatccttgtcatcggcggaaccggcttcatcggc 28533
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 67     atgcggatcctggtcaccggcggaactggcttcatcggc 105
              ||||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 148936 atgcgtatccttgtcatcggcggaaccggcttcatcggc 148898
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>gb|AE012490.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 398
            of 460 of the complete genome
          Length = 11621

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 73   atcctggtcaccggcggaactggcttcatcggctc 107
            ||||||||||||||||| || |||| |||||||||
Sbjct: 7996 atcctggtcaccggcggtaccggctacatcggctc 8030
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 73      atcctggtcaccggcggaactggcttcatcggctc 107
               ||||||||||||||||| || |||| |||||||||
Sbjct: 4456924 atcctggtcaccggcggtaccggctacatcggctc 4456958
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>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 76    ctggtcaccggcggaactggcttcatcggctcgca 110
             ||||| ||||||||| | |||||||||||||||||
Sbjct: 23937 ctggtgaccggcggagccggcttcatcggctcgca 23971
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 76      ctggtcaccggcggaactggcttcatcggc 105
               ||||||||||||| || |||||||||||||
Sbjct: 4839582 ctggtcaccggcgcaagtggcttcatcggc 4839553



 Score = 42.1 bits (21), Expect = 0.76
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 72      gatcctggtcaccggcggaactggcttcatcggctcg 108
               |||||| ||||| |||||| | |||||||||||||||
Sbjct: 1054553 gatcctcgtcacaggcggagccggcttcatcggctcg 1054517
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>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
             sequence
          Length = 90348

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 69    gcggatcctggtcaccggcggaactggcttcatcggctcgca 110
             ||||||||| |||||||||||  | ||||||||||| |||||
Sbjct: 11089 gcggatcctcgtcaccggcggcgccggcttcatcgggtcgca 11130
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 72     gatcctggtcaccggcggaactggcttcatcgg 104
              |||||| |||||||||||| | |||||||||||
Sbjct: 643837 gatcctcgtcaccggcggagccggcttcatcgg 643805



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     atcctggtcaccggcggaac 92
              ||||||||||||||||||||
Sbjct: 775474 atcctggtcaccggcggaac 775493
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      gtcaccggcggaactggctt 98
               ||||||||||||||||||||
Sbjct: 2978868 gtcaccggcggaactggctt 2978849
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 79      gtcaccggcggaactggcttcatcggctcgca 110
               |||||||||||| |||||||| ||||| ||||
Sbjct: 1180729 gtcaccggcggatctggcttcctcggcgcgca 1180698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 814,725
Number of Sequences: 3902068
Number of extensions: 814725
Number of successful extensions: 13640
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13460
Number of HSP's gapped (non-prelim): 180
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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