>HSF1_ARATH (P41151) Heat shock factor protein 1 (HSF 1) (Heat shock|
           transcription factor 1) (HSTF 1)
          Length = 495

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MV+D ATDA V+W P  NSF+V D   FSR LLP +F H
Sbjct: 56  KTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKH 98

>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription|
           factor 8) (HSTF 8) (Heat stress transcription factor)
          Length = 527

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 23/43 (53%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MVDD +TD  V+W P  NSFVV D   F++ LLP +F H
Sbjct: 45  KTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKH 87

>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription|
           factor 8) (HSTF 8) (Heat stress transcription factor)
          Length = 527

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 23/43 (53%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MVDD +TD  V+W P  NSFVV D   F++ LLP +F H
Sbjct: 43  KTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKH 85

>HSF5_ARATH (Q9S7U5) Heat shock factor protein 5 (HSF 5) (Heat shock|
           transcription factor 5) (HSTF 5)
          Length = 374

 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGP-AGNSFVVADXFAFSRALLPAHFXH 129
           MVDD  TD+ ++W P A NSFV+ D   FS  LLP +F H
Sbjct: 27  MVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKH 66

>HSF30_LYCPE (P41152) Heat shock factor protein HSF30 (Heat shock transcription|
           factor 30) (HSTF 30) (Heat stress transcription factor)
          Length = 351

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MV+D +TD  ++W    NSF+V D   FS  LLP  F H
Sbjct: 35  KTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKH 77

>HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat shock|
           transcription factor 1) (HSTF 1)
          Length = 529

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V D  TDA + W P+GNSF V D   F++ +LP +F H
Sbjct: 25  LVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKH 63

>HSF1_MOUSE (P38532) Heat shock factor protein 1 (HSF 1) (Heat shock|
           transcription factor 1) (HSTF 1)
          Length = 525

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V D  TDA + W P+GNSF V D   F++ +LP +F H
Sbjct: 25  LVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKH 63

>HSF3_ARATH (O81821) Heat shock factor protein 3 (HSF 3) (Heat shock|
           transcription factor 3) (HSTF 3)
          Length = 481

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MVDD  T+  V+W    NSFVV     FS+ LLP +F H
Sbjct: 31  KTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKH 73

>HSF1_CHICK (P38529) Heat shock factor protein 1 (HSF 1) (Heat shock|
           transcription factor 1) (HSTF 1) (HSF 3A) (HSTF 3A)
          Length = 491

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V+D  TD  + W P+GNSF V D   F++ +LP +F H
Sbjct: 30  LVEDPETDPLICWSPSGNSFHVFDQGQFAKEVLPKYFKH 68

>HSF4_MOUSE (Q9R0L1) Heat shock factor protein 4 (HSF 4) (Heat shock|
           transcription factor 4) (HSTF 4) (mHSF4)
          Length = 492

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V D  TD  + W P+G SF+V+D   F++ +LP +F H
Sbjct: 27  LVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKH 65

>HSF4_HUMAN (Q9ULV5) Heat shock factor protein 4 (HSF 4) (Heat shock|
           transcription factor 4) (HSTF 4) (hHSF4)
          Length = 493

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V D  TD  + W P+G SF+V+D   F++ +LP +F H
Sbjct: 28  LVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKH 66

>HSF24_LYCPE (P22335) Heat shock factor protein HSF24 (Heat shock transcription|
           factor 24) (HSTF 24) (Heat stress transcription factor)
          Length = 301

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  +VDD ATD  ++W   G +FVV     F++ LLP +F H
Sbjct: 13  KTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKH 55

>HSF4_ARATH (Q96320) Heat shock factor protein 4 (HSF 4) (Heat shock|
           transcription factor 4) (HSTF 4)
          Length = 284

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  +VDD +TD  V+W   G +FVV     F++ LLP +F H
Sbjct: 18  KTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKH 60

>HSF2_ARATH (Q9SCW5) Heat shock factor protein 2 (HSF 2) (Heat shock|
           transcription factor 2) (HSTF 2)
          Length = 468

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  MVDD  TD  V+W    NSFVV +   F++  LP +F H
Sbjct: 27  KTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKH 69

>HSF_XENLA (P41154) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 451

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V+D  TD  + W P GNSF V D   F++ +LP +F H
Sbjct: 22  LVEDPDTDPLICWSPEGNSFHVFDQGQFAKEVLPKYFKH 60

>HSF6_ARATH (Q9SCW4) Heat shock factor protein 6 (HSF 6) (Heat shock|
           transcription factor 6) (HSTF 6)
          Length = 299

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  +V+D + D  ++W   G+SF+V +   F++ LLP HF H
Sbjct: 27  KTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKH 69

>HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 609

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           MV+D +TD+ + W   G+SF+V     F++ +LP +F H
Sbjct: 60  MVNDSSTDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKH 98

>HSF_DROME (P22813) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 691

 Score = 35.4 bits (80), Expect = 0.044
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +VDD  T+  + W   G SFV+ +   F++ LLP ++ H
Sbjct: 56  LVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKH 94

>HSF7_ARATH (Q9T0D3) Heat shock factor protein 7 (HSF 7) (Heat shock|
           transcription factor 7) (HSTF 7)
          Length = 377

 Score = 35.0 bits (79), Expect = 0.058
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +1

Query: 1   KT*GMVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           KT  +V+D   D  ++W   G +F+V     F+R LLP +F H
Sbjct: 63  KTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKH 105

>HSF2_MOUSE (P38533) Heat shock factor protein 2 (HSF 2) (Heat shock|
           transcription factor 2) (HSTF 2)
          Length = 535

 Score = 34.7 bits (78), Expect = 0.075
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V++  T+  + W   G SF+V D   F++ +LP +F H
Sbjct: 17  LVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKH 55

>HSF2_HUMAN (Q03933) Heat shock factor protein 2 (HSF 2) (Heat shock|
           transcription factor 2) (HSTF 2)
          Length = 536

 Score = 34.7 bits (78), Expect = 0.075
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V++  T+  + W   G SF+V D   F++ +LP +F H
Sbjct: 17  LVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKH 55

>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)|
          Length = 539

 Score = 34.7 bits (78), Expect = 0.075
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 49  WGPAGNSFVVADXFAFSRALLPAHFXH 129
           W  +G+SF+V D   F++ +LP HF H
Sbjct: 29  WSDSGDSFIVLDTNEFTKTILPRHFKH 55

>HSF3_CHICK (P38531) Heat shock factor protein 3 (HSF 3) (Heat shock|
           transcription factor 3) (HSTF 3) (HSF 3C) (HSTF 3C)
          Length = 467

 Score = 34.3 bits (77), Expect = 0.098
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V+D  +D  + W   G +F + D   F++ LLP +F H
Sbjct: 26  LVEDPQSDDVICWSRNGENFCILDEQRFAKELLPKYFKH 64

>HSF_KLULA (P22121) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 677

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           MV+D++ +  + W  +G S VV +   F + +LP +F H
Sbjct: 204 MVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKH 242

>HSF2_CHICK (P38530) Heat shock factor protein 2 (HSF 2) (Heat shock|
           transcription factor 2) (HSTF 2) (HSF 3B) (HSTF 3B)
          Length = 564

 Score = 32.3 bits (72), Expect = 0.37
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           +V +  ++  + W   G SF+V D   F++ +LP +F H
Sbjct: 31  LVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKH 69

>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein|
           POS9)
          Length = 622

 Score = 32.0 bits (71), Expect = 0.49
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 43  VAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           V W   G SFVV D   F+  +LP HF H
Sbjct: 104 VTWTENGKSFVVLDTGKFTTHILPNHFKH 132

>HSF_YEAST (P10961) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 833

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 13  MVDDRATDAXVAWGPAGNSFVVADXFAFSRALLPAHFXH 129
           M++D +    + W   G SF+V +   F   +LP +F H
Sbjct: 182 MLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKH 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,791,113
Number of Sequences: 219361
Number of extensions: 51919
Number of successful extensions: 215
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)