>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 464

 Score = 27.7 bits (60), Expect(2) = 0.99
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +1

Query: 163 PAFSPKPSSLHSPCTGVEWSGRGSELAATHLHAPIKGAH 279
           P   P  S +H P  GV     G    A  +H P  G H
Sbjct: 292 PVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330



 Score = 22.3 bits (46), Expect(2) = 0.99
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +2

Query: 71  RPRQATIIAPPPPR*FPTLSLRATAAAVPGCLPSRRSLPP 190
           RP     + PPPP   P   +  T  A P   P    LPP
Sbjct: 244 RPPLPESLPPPPPGGLPLPPMPPTGPA-PSGPPGPPQLPP 282

>MCL1_SCHPO (Q9C107) Minichromosome loss protein 1|
          Length = 815

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 157 WLPAFSPKPSSLHSPCTGVEWSGRGSELAAT 249
           WLP +   P   HS  T + WS  G  +AA+
Sbjct: 218 WLPLYKLLPKENHSGVTDISWSSNGMYIAAS 248

>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 475

 Score = 26.6 bits (57), Expect(2) = 2.7
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +1

Query: 163 PAFSPKPSSLHSPCTGVEWSGRGSELAATHLHAPIKGAH 279
           P   P  S +H P  GV     G    A  +H P  G H
Sbjct: 303 PVVHPPTSGVHPPAPGVHPPTPGVHPPAPGVHPPAPGVH 341



 Score = 21.9 bits (45), Expect(2) = 2.7
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +2

Query: 71  RPRQATIIAPPPPR*FPTLSLRATAAAVPGCLPSRRSLPP 190
           RP     + PPPP   P   +  T  A P   P    +PP
Sbjct: 234 RPPLPDALPPPPPGGLPLPPMPPTGPA-PSGPPGPPQMPP 272

>LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage protein 10)|
          Length = 982

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 243 G*LAPTPTPLHSSARRVQGGRLRREGRQPGTAAA 142
           G LAP P P H   RRV G     E ++ GT+ +
Sbjct: 462 GALAPPPPPSHPIPRRVSGNGWPEENKENGTSTS 495

>ADRO_MOUSE (Q61578) NADPH:adrenodoxin oxidoreductase, mitochondrial precursor|
           (EC 1.18.1.2) (Adrenodoxin reductase) (AR) (Ferredoxin
           reductase) (Ferredoxin--NADP(+) reductase)
          Length = 494

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 257 WRWVAASSL-PRPLHSTPVQGECKEEGFGEK 168
           WRW A S L P P  STP  G C++    EK
Sbjct: 9   WRWSAWSGLRPSPSRSTPTPGFCQKFSTQEK 39

>POLG_GBVB (Q69422) Genome polyprotein [Contains: Core protein; Envelope|
            glycoprotein E1; Envelope glycoprotein E2 (NS1); p13;
            Protease NS2-3 (EC 3.4.22.-); Serine
            protease/NTPase/helicase NS3 (EC 3.4.21.98) (EC 3.6.1.15)
            (EC 3.6.1.-) (Hepacivirin) (NS3P)
          Length = 2864

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
 Frame = +2

Query: 32   PHHHHFVSTSDRIRPRQATIIAPPPPR*FPTLSL-----RATAAAVPGCLPSRRSLPPCT 196
            P     V    + R R  ++  PPPPR  P +S      R+     P  LPS    PP  
Sbjct: 2123 PSIEEVVVRKRQFRARTGSLTLPPPPRSVPGVSCPESLQRSDPLEGPSNLPSS---PPVL 2179

Query: 197  RLALEWSGVGVG 232
            +LA+    +G G
Sbjct: 2180 QLAMPMPLLGAG 2191

>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven|
          Length = 362

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
 Frame = -1

Query: 201 RRVQGGRLRREGR----------QPGTAAAVARKERVGN*RGGGG 97
           R  +GGR RR GR          +PG AAAVAR    G   GGGG
Sbjct: 5   RGARGGRGRRPGRGRPGGDRHSERPGAAAAVAR----GGGGGGGG 45

>EXTL1_HUMAN (Q92935) Exostosin-like 1 (EC 2.4.1.224)|
           (Glucuronosyl-N-acetylglucosaminyl-proteoglycan
           4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L)
           (Multiple exostosis-like protein)
          Length = 676

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -1

Query: 279 VSAFNGGVEVGGG*LAPTPTPLHSSARRVQGGRLRREGRQPGTAAAVARKERVGN*RGGG 100
           V +F  G +V    L P   PL   A     G+LR+   QPG A     +ER G      
Sbjct: 187 VDSFRPGFDVALPFL-PEAHPLRGGAP----GQLRQHSPQPGVALLALEEERGGWRTADT 241

Query: 99  GAMMVAWRGRIRSE 58
           G+    W GR   +
Sbjct: 242 GSSACPWDGRCEQD 255

>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 272  PLMGAWRWVAASSLPRPLHSTPVQGECKEEGFG 174
            P  G   W +A SLPR +H  PV+  C  +G G
Sbjct: 1618 PTAGPETWTSAPSLPRLVHE-PVRCTCSAQGTG 1649

>AM4N_DROAN (Q23834) Alpha-amylase 4N precursor (EC 3.2.1.1)|
          Length = 495

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 90  MVAWRGRIRSEVETKWWWCGGSNQLCFA 7
           MVA+R  + S+ E + WW  GSNQ+ F+
Sbjct: 393 MVAFRNTVGSD-EIQNWWDNGSNQIAFS 419

>CHI1_HORVU (P11955) 26 kDa endochitinase 1 precursor (EC 3.2.1.14)|
          Length = 318

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 157 WLPAFSPKPSSLHSPCTGVEWSGRGSELAA 246
           W+ A +PKPSS H+  TG +WS  G++ AA
Sbjct: 233 WMTAQAPKPSS-HAVITG-QWSPSGTDRAA 260

>CHIA_SECCE (Q9FRV1) Basic endochitinase A precursor (EC 3.2.1.14) (Rye seed|
           chitinase-a) (RSC-a)
          Length = 321

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 157 WLPAFSPKPSSLHSPCTGVEWSGRGSELAA 246
           W+ A +PKPSS H+  TG +WS  G++ AA
Sbjct: 236 WMTAQAPKPSS-HAVITG-QWSPSGTDRAA 263

>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor|
           (Flamingo homolog 2) (hFmi2)
          Length = 3014

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 92  IAPPPPR*FPTLSLRATAAAVP 157
           +APPPP   P L L A AAA+P
Sbjct: 1   MAPPPPPVLPVLLLLAAAAALP 22

>CHIC_SECCE (Q9FRV0) Basic endochitinase C precursor (EC 3.2.1.14) (Rye seed|
           chitinase-c) (RSC-c)
          Length = 266

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 157 WLPAFSPKPSSLHSPCTGVEWSGRGSELAA 246
           W+ A +PKPSS H+  TG +WS  G++ AA
Sbjct: 181 WMTAQAPKPSS-HAVITG-KWSPSGADRAA 208

>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +2

Query: 35  HHHHFVSTSDRIRPRQATIIAPPPPR*FPTLSLRATAAAVPGCLPSRRSLPP 190
           HHHH         P Q     PPPP   P    +   A  P  LPS+ +  P
Sbjct: 150 HHHHAAHHHHHHHPPQPP--PPPPPHMVPYFHQQPAPAPQPPHLPSQPAQQP 199

>AMYB_DROME (P81641) Alpha-amylase B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 494

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 90  MVAWRGRIRSEVETKWWWCGGSNQLCFA 7
           MVA+R  + S+ E + WW  GSNQ+ F+
Sbjct: 392 MVAFRNTVGSD-EIQNWWDNGSNQISFS 418

>AMYA_DROME (P08144) Alpha-amylase A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 494

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 90  MVAWRGRIRSEVETKWWWCGGSNQLCFA 7
           MVA+R  + S+ E + WW  GSNQ+ F+
Sbjct: 392 MVAFRNTVGSD-EIQNWWDNGSNQISFS 418

>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3|
          Length = 950

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +2

Query: 80   QATIIAPPPPR*FP---TLSLRATAAAVPGCLPSRRSLPPCTRLALEWSGVGVG 232
            +A    PP PR      TLS +ATAA+ P   PS  S  P        SG G G
Sbjct: 847  EAPASPPPSPRVLASTSTLSSKATAASSPSPSPSTSSPAPSLEQEEAVSGTGSG 900

>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = -1

Query: 249 GGG*LAPTPTPLHSSA-----RRVQGGRLRREGRQPGTAAAVARKERVGN*RGGGG 97
           GG   A TP P+HS+A     RR   G  R  G +PG       K  +G+ R   G
Sbjct: 229 GGRGRARTPGPVHSAAGGPGSRRRSPGAARDPGPEPGEERGGGGKPPLGSPRATDG 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.126    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,976,772
Number of Sequences: 219361
Number of extensions: 913492
Number of successful extensions: 3001
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2982
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)