>TREA_EMENI (P78617) Acid trehalase precursor (EC 3.2.1.28)|
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 1054

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -1

Query: 400 EYCPWDHEGLHEYVYSTVTYQHLYGVVT----GIVLKMASEDL*FVEVAGQLEEAVVGVR 233
           E C  +H+G+H++ +S  TYQ ++  VT      VL  +S D    +  G +    +G+ 
Sbjct: 31  ENCVRNHDGIHKFRHSNNTYQSMFPGVTWDEDQWVLTTSSLDQGHYQSRGSVANGYIGIS 90

Query: 232 HGEVDP 215
              V P
Sbjct: 91  VSSVGP 96

>RUVC_BRUSU (Q8FZ01) Crossover junction endodeoxyribonuclease ruvC (EC|
           3.1.22.4) (Holliday junction nuclease ruvC) (Holliday
           juction resolvase ruvC)
          Length = 173

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -1

Query: 475 TSGGSKDNQSHAPELPE*STSKQ*HEYCPWDHEGLHEYVYSTVTYQHLYGVVTGI-VLKM 299
           TS    D  S   +L E   SK  HE+ P +    H +V    T     G   GI +L  
Sbjct: 38  TSNAEMDLASRLCQLHE-GLSKVLHEFMPHEAAVEHTFVNKDATATLKLGQARGIALLAP 96

Query: 298 ASEDL*FVEVA-GQLEEAVVGVRHGE 224
           A   L   E A   +++AV+GV HGE
Sbjct: 97  AQAGLPVAEYAPNAVKKAVIGVGHGE 122

>RUVC_BRUME (Q8YIV7) Crossover junction endodeoxyribonuclease ruvC (EC|
           3.1.22.4) (Holliday junction nuclease ruvC) (Holliday
           juction resolvase ruvC)
          Length = 173

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -1

Query: 475 TSGGSKDNQSHAPELPE*STSKQ*HEYCPWDHEGLHEYVYSTVTYQHLYGVVTGI-VLKM 299
           TS    D  S   +L E   SK  HE+ P +    H +V    T     G   GI +L  
Sbjct: 38  TSNAEMDLASRLCQLHE-GLSKVLHEFMPHEAAVEHTFVNKDATATLKLGQARGIALLAP 96

Query: 298 ASEDL*FVEVA-GQLEEAVVGVRHGE 224
           A   L   E A   +++AV+GV HGE
Sbjct: 97  AQAGLPVAEYAPNAVKKAVIGVGHGE 122

>RUVC_BRUAB (Q57BH6) Crossover junction endodeoxyribonuclease ruvC (EC|
           3.1.22.4) (Holliday junction nuclease ruvC) (Holliday
           juction resolvase ruvC)
          Length = 173

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -1

Query: 475 TSGGSKDNQSHAPELPE*STSKQ*HEYCPWDHEGLHEYVYSTVTYQHLYGVVTGI-VLKM 299
           TS    D  S   +L E   SK  HE+ P +    H +V    T     G   GI +L  
Sbjct: 38  TSNAEMDLASRLCQLHE-GLSKVLHEFMPHEAAVEHTFVNKDATATLKLGQARGIALLAP 96

Query: 298 ASEDL*FVEVA-GQLEEAVVGVRHGE 224
           A   L   E A   +++AV+GV HGE
Sbjct: 97  AQAGLPVAEYAPNAVKKAVIGVGHGE 122

>NDC1_XENLA (Q6AX31) Nucleoporin NDC1 (xNDC1) (Transmembrane protein 48)|
          Length = 660

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 272 LHELQILTGHLENYTSDYTVQVLIGYCAVYIFMQTFMI 385
           LH +Q LT  + + TS YT+  L+  CA+     TF++
Sbjct: 41  LHPIQWLTDSISDLTSSYTIFCLLLICAILGLQCTFLM 78

>YDJZ_ECOLI (P76221) UPF0043 inner membrane protein ydjZ|
          Length = 235

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 362 IFMQTFMIPGTIFMSLLAGA-LFGQLRGVALVVFAASAGASSCYFLSKLIGK 514
           + +Q    P   F+   A A LFG   G  L   ++ AGA+ C+F+++++G+
Sbjct: 71  MILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGR 122

>Y643_METMA (Q8PZ51) UPF0059 membrane protein MM0643|
          Length = 186

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 400 EYCPWDHEGLHEYVYSTVTYQHLYGVVTGIVLKMASEDL*FVEVAGQLEEAVVGV 236
           +Y PW   GL  ++   + Y+ LYG   G V  +    L  + VA  ++   VG+
Sbjct: 67  DYAPWIAFGLLAFIGGKMIYEALYGDPDGKVNSLNYSMLFLLAVATSIDALAVGI 121

>EDN3_HUMAN (P14138) Endothelin-3 precursor (ET-3) (Preproendothelin-3) (PPET3)|
          Length = 238

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -1

Query: 271 VAGQLEEAVVGVRHGEVDPDEARGEDGGDPGAER 170
           VAG  EE V G   G V P   +G   G PG E+
Sbjct: 50  VAGPGEETVAGPGEGTVAPTALQGPSPGSPGQEQ 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,036,211
Number of Sequences: 219361
Number of extensions: 953349
Number of successful extensions: 2639
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2636
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)