ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110150.1| Zea mays CL16078_1 mRNA sequence 88 3e-14
2ref|XM_475700.1| Oryza sativa (japonica cultivar-group), predic... 82 2e-12
3dbj|AK101753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
4gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
5gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
7gb|BT017886.1| Zea mays clone EL01N0514G06.c mRNA sequence 68 3e-08
8gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, comple... 54 4e-04
9ref|NM_192939.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AK063308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
13ref|NM_191356.1| Oryza sativa (japonica cultivar-group), predic... 46 0.098
14gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, com... 46 0.098
15gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone ... 46 0.098
16dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
17ref|XM_479043.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
20dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
21dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
22dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
23dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
24dbj|AK112017.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
25dbj|AK111970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
26dbj|AK111913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
27gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosom... 42 1.5
28gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
29gb|AY109031.1| Zea mays PCO112628 mRNA sequence 42 1.5
30gb|AC003669.1|AC003669 Homo sapiens Xp22 BAC GS-594A7 (Genome Sy... 42 1.5
31gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
32gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, com... 40 6.1
33ref|XM_475945.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
34ref|XM_473861.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
35ref|XM_365165.1| Magnaporthe grisea 70-15 predicted protein (MG1... 40 6.1
36gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
37emb|CR697736.2|CNS0G1BO Tetraodon nigroviridis full-length cDNA 40 6.1
38emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L... 40 6.1
39emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
40emb|BX914220.7| Zebrafish DNA sequence from clone DKEYP-101F3 in... 40 6.1
41gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell... 40 6.1
42gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswel... 40 6.1
43dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
44gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, com... 40 6.1
45gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Ca... 40 6.1
46dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
48dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
49dbj|AK072274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
50dbj|AK068685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
51dbj|AK060663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
52gb|AY110724.1| Zea mays CL16591_1 mRNA sequence 40 6.1
53gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11... 40 6.1 
>gb|AY110150.1| Zea mays CL16078_1 mRNA sequence
          Length = 1241

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 96/114 (84%)
 Strand = Plus / Plus

                                                                       
Query: 332 ctgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcgccacctgcga 391
           ||||||||||  ||||||||||||| ||||||    |  |||| ||||||||||||||||
Sbjct: 267 ctgctcctacatctgcaacagctactaccagagccgcagcggcatgggcgccacctgcga 326

                                                                 
Query: 392 cttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcctgcaa 445
           |||||  ||||||||| ||||||||||| | ||||||||| ||||  |||||||
Sbjct: 327 cttcaacggcgtcgccaccctcaccggcaccgaccccagctccgggacctgcaa 380
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>ref|XM_475700.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 687

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 tgctcttgctcgccatgttcgccggctcaaatgcgatgtactgcgtgtgcaagtcggacg 219
           |||||||||| ||||||| | | |||||| ||| |  || ||||||||||||| | ||| 
Sbjct: 23  tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 82

                                                                       
Query: 220 cgaacccggtggcgatgcaaaaggccatcgactacgcgtgcggcaagggcgcccactgca 279
            || ||||| ||||||||| ||||||||||||||||||||| |    |||||| ||||||
Sbjct: 83  agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 142

                    
Query: 280 cccagatca 288
           |||||||||
Sbjct: 143 cccagatca 151



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 322 tcgtcgcccactgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcg 381
           ||||||| |||||||||||||||  ||||  ||||  ||||||||||  |  | | ||||
Sbjct: 185 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 244

                                                                       
Query: 382 ccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcct 441
           ||||||||||||||   ||||||||| ||||||||  | | ||||||||| ||||  |||
Sbjct: 245 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 304

                    
Query: 442 gcaaatacc 450
           |||| ||||
Sbjct: 305 gcaagtacc 313
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>dbj|AK101753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063E20, full
           insert sequence
          Length = 1020

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 tgctcttgctcgccatgttcgccggctcaaatgcgatgtactgcgtgtgcaagtcggacg 219
           |||||||||| ||||||| | | |||||| ||| |  || ||||||||||||| | ||| 
Sbjct: 144 tgctcttgctggccatgtccacaggctcagatggggcgttctgcgtgtgcaagcccgacc 203

                                                                       
Query: 220 cgaacccggtggcgatgcaaaaggccatcgactacgcgtgcggcaagggcgcccactgca 279
            || ||||| ||||||||| ||||||||||||||||||||| |    |||||| ||||||
Sbjct: 204 agagcccggcggcgatgcagaaggccatcgactacgcgtgctggcgcggcgccgactgca 263

                    
Query: 280 cccagatca 288
           |||||||||
Sbjct: 264 cccagatca 272



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 322 tcgtcgcccactgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcg 381
           ||||||| |||||||||||||||  ||||  ||||  ||||||||||  |  | | ||||
Sbjct: 306 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 365

                                                                       
Query: 382 ccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcct 441
           ||||||||||||||   ||||||||| ||||||||  | | ||||||||| ||||  |||
Sbjct: 366 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 425

                    
Query: 442 gcaaatacc 450
           |||| ||||
Sbjct: 426 gcaagtacc 434
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>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
             complete sequence
          Length = 146712

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                         
Query: 200   ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcaaaaggccatcgactacgcgtg 259
             ||||||||||||| | |||  || ||||| ||||||||| ||||||||||||||||||||
Sbjct: 62527 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 62586

                                          
Query: 260   cggcaagggcgcccactgcacccagatca 288
             | |    |||||| |||||||||||||||
Sbjct: 62587 ctggcgcggcgccgactgcacccagatca 62615



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                         
Query: 322   tcgtcgcccactgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcg 381
             ||||||| |||||||||||||||  ||||  ||||  ||||||||||  |  | | ||||
Sbjct: 62649 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 62708

                                                                         
Query: 382   ccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcct 441
             ||||||||||||||   ||||||||| ||||||||  | | ||||||||| ||||  |||
Sbjct: 62709 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 62768

                      
Query: 442   gcaaatacc 450
             |||| ||||
Sbjct: 62769 gcaagtacc 62777
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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
              complete sequence
          Length = 162772

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                          
Query: 200    ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcaaaaggccatcgactacgcgtg 259
              ||||||||||||| | |||  || ||||| ||||||||| ||||||||||||||||||||
Sbjct: 142341 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 142400

                                           
Query: 260    cggcaagggcgcccactgcacccagatca 288
              | |    |||||| |||||||||||||||
Sbjct: 142401 ctggcgcggcgccgactgcacccagatca 142429



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                          
Query: 322    tcgtcgcccactgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcg 381
              ||||||| |||||||||||||||  ||||  ||||  ||||||||||  |  | | ||||
Sbjct: 142463 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 142522

                                                                          
Query: 382    ccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcct 441
              ||||||||||||||   ||||||||| ||||||||  | | ||||||||| ||||  |||
Sbjct: 142523 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 142582

                       
Query: 442    gcaaatacc 450
              |||| ||||
Sbjct: 142583 gcaagtacc 142591



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ctctctcccacgccacgcca 44
             ||||||||||||||||||||
Sbjct: 25467 ctctctcccacgccacgcca 25486
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                            
Query: 200      ctgcgtgtgcaagtcggacgcgaacccggtggcgatgcaaaaggccatcgactacgcgtg 259
                ||||||||||||| | |||  || ||||| ||||||||| ||||||||||||||||||||
Sbjct: 25199686 ctgcgtgtgcaagcccgaccagagcccggcggcgatgcagaaggccatcgactacgcgtg 25199745

                                             
Query: 260      cggcaagggcgcccactgcacccagatca 288
                | |    |||||| |||||||||||||||
Sbjct: 25199746 ctggcgcggcgccgactgcacccagatca 25199774



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                            
Query: 322      tcgtcgcccactgctcctacgcctgcaacagctacaaccagaagaacgccggcntgggcg 381
                ||||||| |||||||||||||||  ||||  ||||  ||||||||||  |  | | ||||
Sbjct: 25199808 tcgtcgcgcactgctcctacgccaccaactcctacttccagaagaacagccccatcggcg 25199867

                                                                            
Query: 382      ccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccggatcct 441
                ||||||||||||||   ||||||||| ||||||||  | | ||||||||| ||||  |||
Sbjct: 25199868 ccacctgcgacttcggcggcgtcgccaccctcaccaacaccgaccccagctccggcacct 25199927

                         
Query: 442      gcaaatacc 450
                |||| ||||
Sbjct: 25199928 gcaagtacc 25199936



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 341      cgcctgcaacagctacaaccagaagaac 368
                ||||| |||||||||| |||||||||||
Sbjct: 28731509 cgccttcaacagctactaccagaagaac 28731482



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       ctctctcccacgccacgcca 44
                ||||||||||||||||||||
Sbjct: 25082812 ctctctcccacgccacgcca 25082831
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>gb|BT017886.1| Zea mays clone EL01N0514G06.c mRNA sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 377 gggcgccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccgg 436
           ||||||||||||||||||||  ||||||||| | ||||||||| | ||||||||| ||||
Sbjct: 376 gggcgccacctgcgacttcaacggcgtcgccacgctcaccggcaccgaccccagctccgg 435

                    
Query: 437 atcctgcaa 445
             |||||||
Sbjct: 436 cacctgcaa 444
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>gb|AC009475.5| Homo sapiens BAC clone RP11-285F23 from 2, complete sequence
          Length = 190349

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 1      actgcacaccaccaccccactccactctctc 31
              ||||||| |||||||||||||||||||||||
Sbjct: 188331 actgcaccccaccaccccactccactctctc 188361
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>ref|NM_192939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 840

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 335 ctcctacgcctgcaacagctacaaccagaagaac 368
           ||||||||||| |||||||||| |||||||||||
Sbjct: 411 ctcctacgccttcaacagctactaccagaagaac 444
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 335      ctcctacgcctgcaacagctacaaccagaagaac 368
                ||||||||||| |||||||||| |||||||||||
Sbjct: 25268622 ctcctacgccttcaacagctactaccagaagaac 25268655
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>dbj|AP003681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1158C05
          Length = 145514

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 335   ctcctacgcctgcaacagctacaaccagaagaac 368
             ||||||||||| |||||||||| |||||||||||
Sbjct: 65666 ctcctacgccttcaacagctactaccagaagaac 65699
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>dbj|AK063308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F12, full
           insert sequence
          Length = 1275

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 335 ctcctacgcctgcaacagctacaaccagaagaac 368
           ||||||||||| |||||||||| |||||||||||
Sbjct: 484 ctcctacgccttcaacagctactaccagaagaac 517
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>ref|NM_191356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 510

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 gggcgccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccgg 436
           |||||||||||||||||||   |||| |||| ||||| ||  | | ||||||||| | ||
Sbjct: 252 gggcgccacctgcgacttcggcggcgccgccaccctctcctccaccgaccccagctcagg 311

                         
Query: 437 atcctgcaaatacc 450
           | ||||||||||||
Sbjct: 312 aacctgcaaatacc 325
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>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence
          Length = 216320

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 146   tcctctggtcctcatgctcttgc 168
             |||||||||||||||||||||||
Sbjct: 49892 tcctctggtcctcatgctcttgc 49914
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>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete
             sequence
          Length = 245536

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 146   tcctctggtcctcatgctcttgc 168
             |||||||||||||||||||||||
Sbjct: 81103 tcctctggtcctcatgctcttgc 81081
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>dbj|AK108127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D06, full
           insert sequence
          Length = 954

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 gggcgccacctgcgacttcatgggcgtcgccnccctcaccggcgctgaccccagcgccgg 436
           |||||||||||||||||||   |||| |||| ||||| ||  | | ||||||||| | ||
Sbjct: 357 gggcgccacctgcgacttcggcggcgccgccaccctctcctccaccgaccccagctcagg 416

                         
Query: 437 atcctgcaaatacc 450
           | ||||||||||||
Sbjct: 417 aacctgcaaatacc 430
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>ref|XM_479043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 576

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 376 tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
           |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 239 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 279



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 230 ggcgatgcaaaaggccatcgactacgcgtgcggc 263
           |||| |||| ||| ||||||||||||||||||||
Sbjct: 93  ggcgctgcagaagaccatcgactacgcgtgcggc 126
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 99       cgagagaagagctcgagctcca 120
                ||||||||||||||||||||||
Sbjct: 12191283 cgagagaagagctcgagctcca 12191262



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 325      tcgcccactgctcctacgcctgcaacagctac 356
                ||||||||  ||||||||||| ||||||||||
Sbjct: 21983354 tcgcccacgcctcctacgccttcaacagctac 21983323
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 376      tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
                |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 24452870 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 24452910



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 230      ggcgatgcaaaaggccatcgactacgcgtgcggc 263
                |||| |||| ||| ||||||||||||||||||||
Sbjct: 24452724 ggcgctgcagaagaccatcgactacgcgtgcggc 24452757
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>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ2013_G04
          Length = 73667

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 376  tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
            |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 2680 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 2720



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 230  ggcgatgcaaaaggccatcgactacgcgtgcggc 263
            |||| |||| ||| ||||||||||||||||||||
Sbjct: 2534 ggcgctgcagaagaccatcgactacgcgtgcggc 2567
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>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 376   tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
             |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 78737 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 78777



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 230   ggcgatgcaaaaggccatcgactacgcgtgcggc 263
             |||| |||| ||| ||||||||||||||||||||
Sbjct: 78591 ggcgctgcagaagaccatcgactacgcgtgcggc 78624
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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1759_F09
          Length = 149501

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     cgagagaagagctcgagctcca 120
              ||||||||||||||||||||||
Sbjct: 102742 cgagagaagagctcgagctcca 102721
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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0564H06
          Length = 146823

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     cgagagaagagctcgagctcca 120
              ||||||||||||||||||||||
Sbjct: 125662 cgagagaagagctcgagctcca 125641
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>dbj|AK112017.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A05, full
           insert sequence
          Length = 1116

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 376 tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
           |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 350 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 390



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 230 ggcgatgcaaaaggccatcgactacgcgtgcggc 263
           |||| |||| ||| ||||||||||||||||||||
Sbjct: 204 ggcgctgcagaagaccatcgactacgcgtgcggc 237
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>dbj|AK111970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C09, full
           insert sequence
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 376 tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
           |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 415 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 455



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 230 ggcgatgcaaaaggccatcgactacgcgtgcggc 263
           |||| |||| ||| ||||||||||||||||||||
Sbjct: 269 ggcgctgcagaagaccatcgactacgcgtgcggc 302
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>dbj|AK111913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126J18, full
           insert sequence
          Length = 1119

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 376 tgggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
           |||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 356 tgggcgccacctgcgacttcaccggcaccgccaccctcacc 396



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 230 ggcgatgcaaaaggccatcgactacgcgtgcggc 263
           |||| |||| ||| ||||||||||||||||||||
Sbjct: 210 ggcgctgcagaagaccatcgactacgcgtgcggc 243
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>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence
          Length = 216902

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 7      caccaccaccccactccactctctcccac 35
              ||||||||||||||||||| ||| |||||
Sbjct: 176939 caccaccaccccactccaccctcccccac 176911
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 416     cggcgctgaccccagcgccgg 436
               |||||||||||||||||||||
Sbjct: 2274765 cggcgctgaccccagcgccgg 2274745
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>gb|AY109031.1| Zea mays PCO112628 mRNA sequence
          Length = 676

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 377 gggcgccacctgcgacttcatgggcgtcgccnccctcacc 416
           ||||||||||||||||||||  |||  |||| ||||||||
Sbjct: 517 gggcgccacctgcgacttcaccggcaccgccgccctcacc 556
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>gb|AC003669.1|AC003669 Homo sapiens Xp22 BAC GS-594A7 (Genome Systems Human BAC library)
              contains Bmx gene, complete sequence
          Length = 159446

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    tcctctggtcctcatgctctt 166
              |||||||||||||||||||||
Sbjct: 118659 tcctctggtcctcatgctctt 118679
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 361    agaagaacgccggcntgggcgcc 383
              |||||||||||||| ||||||||
Sbjct: 240197 agaagaacgccggcatgggcgcc 240219
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>gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, complete sequence
          Length = 152264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    ctccctccccctctttgcttgcca 73
             |||||||||||| |||||||||||
Sbjct: 26374 ctccctccccctttttgcttgcca 26351
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>ref|XM_475945.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 341 cgcctgcaacagctacaaccagaagaac 368
           ||||| |||||||||| |||||||||||
Sbjct: 471 cgccttcaacagctactaccagaagaac 498
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>ref|XM_473861.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 325  tcgcccactgctcctacgcctgcaacagctac 356
            ||||||||  ||||||||||| ||||||||||
Sbjct: 2294 tcgcccacgcctcctacgccttcaacagctac 2263
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>ref|XM_365165.1| Magnaporthe grisea 70-15 predicted protein (MG10010.4) partial mRNA
          Length = 345

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 ggcgctgaccccagcgccgg 436
           ||||||||||||||||||||
Sbjct: 208 ggcgctgaccccagcgccgg 227
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>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11,
             complete sequence
          Length = 112796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 341   cgcctgcaacagctacaaccagaagaac 368
             ||||| |||||||||| |||||||||||
Sbjct: 50222 cgccttcaacagctactaccagaagaac 50195
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>emb|CR697736.2|CNS0G1BO Tetraodon nigroviridis full-length cDNA
          Length = 1765

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 227 ggtggcgatgcaaaaggccatcgactac 254
           |||||||| ||||||||||| |||||||
Sbjct: 929 ggtggcgaagcaaaaggccaacgactac 956
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>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the
             5' end of the C20orf23 gene for a novel protein similar to
             KIF1 type and other kinesin-like proteins, the RPLP0P1
             gene for ribosomal protein large P0 pseudogene 1 and a CpG
             island, complete sequence
          Length = 119696

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ccactccactctctcccacgccac 40
             ||||||||||||||||||| ||||
Sbjct: 78560 ccactccactctctcccactccac 78583
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 325   tcgcccactgctcctacgcctgcaacagctac 356
             ||||||||  ||||||||||| ||||||||||
Sbjct: 58506 tcgcccacgcctcctacgccttcaacagctac 58475
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>emb|BX914220.7| Zebrafish DNA sequence from clone DKEYP-101F3 in linkage group 6,
             complete sequence
          Length = 94202

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aatgcgatgtactgcgtgtg 208
             ||||||||||||||||||||
Sbjct: 33634 aatgcgatgtactgcgtgtg 33653
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>gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cacaccaccaccccactcca 24
             ||||||||||||||||||||
Sbjct: 67307 cacaccaccaccccactcca 67326
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>gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172284

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     cacaccaccaccccactcca 24
             ||||||||||||||||||||
Sbjct: 58902 cacaccaccaccccactcca 58883
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 325      tcgcccactgctcctacgcctgcaacagctac 356
                ||||||||  ||||||||||| ||||||||||
Sbjct: 31076425 tcgcccacgcctcctacgccttcaacagctac 31076394
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>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence
          Length = 212548

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    ctctggtcctcatgctcttg 167
              ||||||||||||||||||||
Sbjct: 111965 ctctggtcctcatgctcttg 111946
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>gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169819

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     caccccactccactctctcc 32
              ||||||||||||||||||||
Sbjct: 115143 caccccactccactctctcc 115162
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 325   tcgcccactgctcctacgcctgcaacagctac 356
             ||||||||  ||||||||||| ||||||||||
Sbjct: 25418 tcgcccacgcctcctacgccttcaacagctac 25387
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>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1065_E04
          Length = 115865

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 325    tcgcccactgctcctacgcctgcaacagctac 356
              ||||||||  ||||||||||| ||||||||||
Sbjct: 114071 tcgcccacgcctcctacgccttcaacagctac 114040
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>dbj|AK109090.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A02, full
           insert sequence
          Length = 1233

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 341 cgcctgcaacagctacaaccagaagaac 368
           ||||| |||||||||| |||||||||||
Sbjct: 581 cgccttcaacagctactaccagaagaac 608
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>dbj|AK072274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A21,
          full insert sequence
          Length = 3534

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 ctctctcccacgccacgcca 44
          ||||||||||||||||||||
Sbjct: 18 ctctctcccacgccacgcca 37
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>dbj|AK068685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L06,
          full insert sequence
          Length = 1878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 25 ctctctcccacgccacgcca 44
          ||||||||||||||||||||
Sbjct: 18 ctctctcccacgccacgcca 37
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>dbj|AK060663.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B06, full
            insert sequence
          Length = 1448

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 325  tcgcccactgctcctacgcctgcaacagctac 356
            ||||||||  ||||||||||| ||||||||||
Sbjct: 989  tcgcccacgcctcctacgccttcaacagctac 1020
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>gb|AY110724.1| Zea mays CL16591_1 mRNA sequence
          Length = 915

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 327 gcccactgctcctacgcctgcaacagct 354
           ||||||||||||||||||  ||||||||
Sbjct: 606 gcccactgctcctacgccgccaacagct 579
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>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
              sequence
          Length = 297894

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cacaccaccaccccactcca 24
              ||||||||||||||||||||
Sbjct: 267967 cacaccaccaccccactcca 267948


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,118,989
Number of Sequences: 3902068
Number of extensions: 3118989
Number of successful extensions: 66274
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65835
Number of HSP's gapped (non-prelim): 429
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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