ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1... 53 2e-07
2APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1... 45 4e-05
3APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11... 37 0.014
4APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11... 33 0.16
5APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.1... 31 0.77
6APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1... 31 0.77

>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)|
          Length = 291

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 25/41 (60%), Positives = 27/41 (65%)
 Frame = +2

Query: 83  MAAPVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWHD 205
           MAAPVVDA+YLR VD         I+  GCAP  LRLAWHD
Sbjct: 1   MAAPVVDAEYLRQVDRARRHLRALISSKGCAPIMLRLAWHD 41



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>APX3_ORYSA (Q6TY83) Putative L-ascorbate peroxidase 3 (EC 1.11.1.11)|
          Length = 291

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 21/40 (52%), Positives = 24/40 (60%)
 Frame = +2

Query: 86  AAPVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWHD 205
           AAPVVDA+Y+  V+         IA   CAP  LRLAWHD
Sbjct: 3   AAPVVDAEYMAEVERARRDLRALIASKSCAPIMLRLAWHD 42



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>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)|
          Length = 249

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +2

Query: 92  PVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWH 202
           PVV A+Y   V+         IA   CAP  LRLAWH
Sbjct: 5   PVVSAEYQEAVEKARQKLRALIAEKSCAPLMLRLAWH 41



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>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)|
          Length = 251

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +2

Query: 92  PVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWH 202
           P V  +YL  V          IA   CAP  LRLAWH
Sbjct: 7   PTVSDEYLAAVGKAKRKLRGLIAEKNCAPLMLRLAWH 43



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>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)|
          Length = 249

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 92  PVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWH 202
           P V   Y + ++         IA   CAP  LRLAWH
Sbjct: 5   PTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWH 41



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>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)|
          Length = 249

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 92  PVVDAQYLRXVDGXXXXXXXXIAPXGCAPXRLRLAWH 202
           P V   Y + V+         IA   CAP  +RLAWH
Sbjct: 5   PTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWH 41


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,980,593
Number of Sequences: 219361
Number of extensions: 133182
Number of successful extensions: 499
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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