ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ... 206 2e-50
2gb|BT016732.1| Zea mays clone Contig565 mRNA sequence 127 1e-26
3ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA 115 6e-23
4ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group... 115 6e-23
5dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 6e-23
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 113 2e-22
7dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic D... 113 2e-22
8dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 1e-20
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 98 1e-17
10dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 98 1e-17
11gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL03... 82 8e-13
12gb|AY109419.1| Zea mays CL26634_1 mRNA sequence 66 5e-08
13gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxid... 50 0.003
14gb|AY382617.1| Oryza sativa (indica cultivar-group) putative per... 46 0.043
15ref|XM_474945.1| Oryza sativa (japonica cultivar-group), predic... 46 0.043
16ref|NM_187854.1| Oryza sativa (japonica cultivar-group), Ozsa829... 44 0.17
17emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,... 44 0.17
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
20dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
21dbj|AK100105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.17
22ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 42 0.67
23emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate... 42 0.67
24gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complet... 42 0.67
25dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
26dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
27gb|AY104492.1| Zea mays PCO104002 mRNA sequence 42 0.67
28gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 2.7
29gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia re... 40 2.7
30gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 2.7
31emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chr... 40 2.7
32gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence 40 2.7
33gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 2.7
34gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Can... 40 2.7
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.7
36ref|NM_207746.1| Eremothecium gossypii AAL149Cp (AAL149C), mRNA 40 2.7

>dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate
           peroxidase, complete cds
          Length = 1089

 Score =  206 bits (104), Expect = 2e-50
 Identities = 134/146 (91%)
 Strand = Plus / Plus

                                                                       
Query: 65  cttctngggtcgtccgcgatggcngctcccgtggtggacgcccagtacctgcgccnggtc 124
           ||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||| ||||
Sbjct: 1   cttctagggtcgtccgcgatggcggctccggtggtggacgccgagtacctgcgccaggtc 60

                                                                       
Query: 125 gacggggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccntcagg 184
           ||| |||||||||||||| ||||||||||||||||| || |||||||||||||| ||| |
Sbjct: 61  gacagggcgcgccgcgccttccgtgccctcatcgcctccaagggatgcgcccccatcatg 120

                                     
Query: 185 ctccgcctcgcatggcatgatnctgg 210
           ||||||||||||||||||||| ||||
Sbjct: 121 ctccgcctcgcatggcatgatgctgg 146



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>gb|BT016732.1| Zea mays clone Contig565 mRNA sequence
          Length = 1248

 Score =  127 bits (64), Expect = 1e-26
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcgatggcngctcccgtggtggacgcccagtacctgcgccnggtcgacggggcgcgccgc 139
           |||||||| |||||| |||| |||||| | |||||||||| ||||||| |||||||||||
Sbjct: 134 gcgatggcggctcccatggtcgacgccgaatacctgcgccaggtcgacagggcgcgccgc 193

                                                                       
Query: 140 gccctccgtgccctcatcgcccccnagggatgcgcccccntcaggctccgcctcgcatgg 199
             |||||| ||||||||| ||  | |||||||||||||  ||| ||||||||||||||||
Sbjct: 194 cacctccgcgccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatgg 253

                      
Query: 200 catgatnctgg 210
           |||||| ||||
Sbjct: 254 catgatgctgg 264



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>ref|XM_483666.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1158

 Score =  115 bits (58), Expect = 6e-23
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
           ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 122 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 181

                                                          
Query: 158 gcccccnagggatgcgcccccntcaggctccgcctcgcatggcatga 204
            || || |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 182 tcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatga 228



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>ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA
          Length = 1229

 Score =  115 bits (58), Expect = 6e-23
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
           ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 133 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 192

                                                          
Query: 158 gcccccnagggatgcgcccccntcaggctccgcctcgcatggcatga 204
            || || |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 193 tcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatga 239



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>dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full
           insert sequence
          Length = 1229

 Score =  115 bits (58), Expect = 6e-23
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
           ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 133 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 192

                                                          
Query: 158 gcccccnagggatgcgcccccntcaggctccgcctcgcatggcatga 204
            || || |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 193 tcctccaagggatgcgcgcccatcatgctccgcctcgcatggcatga 239



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  113 bits (57), Expect = 2e-22
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                            
Query: 83       atggcngctcccgtggtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgcc 142
                ||||| ||||| |||||||||||  |||||||||| | |||||| ||||||||||||| |
Sbjct: 20903600 atggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgac 20903541

                                                                     
Query: 143      ctccgtgccctcatcgcccccnagggatgcgcccccntcaggctccgcctcgc 195
                ||||| || ||||||||| || |||| ||||||||| ||| ||||||||||||
Sbjct: 20903540 ctccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 20903488



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>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0229B10
          Length = 114509

 Score =  113 bits (57), Expect = 2e-22
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                         
Query: 83    atggcngctcccgtggtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgcc 142
             ||||| ||||| |||||||||||  |||||||||| | |||||| ||||||||||||| |
Sbjct: 95826 atggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgac 95767

                                                                  
Query: 143   ctccgtgccctcatcgcccccnagggatgcgcccccntcaggctccgcctcgc 195
             ||||| || ||||||||| || |||| ||||||||| ||| ||||||||||||
Sbjct: 95766 ctccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 95714



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>dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full
           insert sequence
          Length = 1158

 Score =  107 bits (54), Expect = 1e-20
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
           ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 122 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 181

                                                          
Query: 158 gcccccnagggatgcgcccccntcaggctccgcctcgcatggcatga 204
             | || |||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 182 ttctccaagggatgcgcgcccatcatgctccgcctcgcatggcatga 228



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                            
Query: 98       gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
                ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 27551939 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 27551880

                                                      
Query: 158      gcccccnagggatgcgcccccntcaggctccgcctcgc 195
                 || || |||||||||| ||| ||| ||||||||||||
Sbjct: 27551879 tcctccaagggatgcgcgcccatcatgctccgcctcgc 27551842



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>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                         
Query: 98    gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
             ||||||||| ||||||| |||| ||||||| |||||||||||  |||||| |||||||||
Sbjct: 34229 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccacctccgcgccctcatc 34170

                                                   
Query: 158   gcccccnagggatgcgcccccntcaggctccgcctcgc 195
              || || |||||||||| ||| ||| ||||||||||||
Sbjct: 34169 tcctccaagggatgcgcgcccatcatgctccgcctcgc 34132



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>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene
             region
          Length = 65993

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 98    gtggacgcccagtacctgcgccnggtcgacggggcgcgccgcgccctccgtgccctcatc 157
             ||||||||| ||||||| |||| ||||||| |||||||||||   || || |||||||||
Sbjct: 56979 gtggacgccgagtacctccgccaggtcgacagggcgcgccgccaacttcgcgccctcatc 56920

                                                   
Query: 158   gcccccnagggatgcgcccccntcaggctccgcctcgc 195
              || || |||||||||| ||| ||| ||||||||||||
Sbjct: 56919 tcctccaagggatgcgcgcccatcatgctccgcctcgc 56882



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>gb|AY109419.1| Zea mays CL26634_1 mRNA sequence
          Length = 1373

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 149  gccctcatcgcccccnagggatgcgcccccntcaggctccgcctcgcatggcatgatnct 208
            ||||||||| ||  | |||||||||||||  ||| |||||||||||||||||||||| ||
Sbjct: 1206 gccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatgatgct 1147

              
Query: 209  gg 210
            ||
Sbjct: 1146 gg 1145



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>gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxidase (cmApx) mRNA, complete
           cds
          Length = 1167

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 73/90 (81%)
 Strand = Plus / Plus

                                                                       
Query: 121 ggtcgacggggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccnt 180
           |||||||  ||||||| | | |||||| ||||||||||||  | ||   ||||| ||| |
Sbjct: 90  ggtcgacaaggcgcgcagggacctccgcgccctcatcgccagcaagaactgcgctcccgt 149

                                         
Query: 181 caggctccgcctcgcatggcatgatnctgg 210
           || ||||||||| |||||||||||| ||||
Sbjct: 150 catgctccgcctagcatggcatgatgctgg 179



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>gb|AY382617.1| Oryza sativa (indica cultivar-group) putative peroxisome-bound
           ascorbate peroxidase (APx3) mRNA, complete cds
          Length = 1060

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 129 gggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccntcaggctcc 188
           |||||||||||| ||| || ||||||||||||  | || | ||||| ||| ||| |||||
Sbjct: 89  gggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctcc 148

                        
Query: 189 gcctcgcatggca 201
           |||| || |||||
Sbjct: 149 gcctggcgtggca 161



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>ref|XM_474945.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 129 gggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccntcaggctcc 188
           |||||||||||| ||| || ||||||||||||  | || | ||||| ||| ||| |||||
Sbjct: 50  gggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctcc 109

                        
Query: 189 gcctcgcatggca 201
           |||| || |||||
Sbjct: 110 gcctggcgtggca 122



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>ref|NM_187854.1| Oryza sativa (japonica cultivar-group), Ozsa8298 predicted mRNA
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 125 gacggggcgcgccgcgccctcc 146
           ||||||||||||||||||||||
Sbjct: 24  gacggggcgcgccgcgccctcc 3



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>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
             complete sequence
          Length = 130433

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 129   gggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccntcaggctcc 188
             |||||||||||| ||| || ||||||||||||  | || | ||||| ||| ||| |||||
Sbjct: 11147 gggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctcc 11088

                 
Query: 189   gcct 192
             ||||
Sbjct: 11087 gcct 11084



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                           
Query: 129     gggcgcgccgcgccctccgtgccctcatcgcccccnagggatgcgcccccntcaggctcc 188
               |||||||||||| ||| || ||||||||||||  | || | ||||| ||| ||| |||||
Sbjct: 8200634 gggcgcgccgcgacctgcgcgccctcatcgccagcaagagctgcgctcccatcatgctcc 8200575

                   
Query: 189     gcct 192
               ||||
Sbjct: 8200574 gcct 8200571



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 125     gacggggcgcgccgcgccctcc 146
               ||||||||||||||||||||||
Sbjct: 8283612 gacggggcgcgccgcgccctcc 8283591



 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 29       ctcctcgcctcgctccccgcc 49
                |||||||||||||||||||||
Sbjct: 41126850 ctcctcgcctcgctccccgcc 41126830



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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0434D08
          Length = 161266

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 125   gacggggcgcgccgcgccctcc 146
             ||||||||||||||||||||||
Sbjct: 77543 gacggggcgcgccgcgccctcc 77522



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>dbj|AK100105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004L24, full
           insert sequence
          Length = 1965

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 125 gacggggcgcgccgcgccctcc 146
           ||||||||||||||||||||||
Sbjct: 145 gacggggcgcgccgcgccctcc 124



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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 29  ctcctcgcctcgctccccgcc 49
           |||||||||||||||||||||
Sbjct: 493 ctcctcgcctcgctccccgcc 513



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>emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase
          Length = 1042

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 170 tgcgcccccntcaggctccgcctcgcatggca 201
           ||||||||  ||| ||||||||||||||||||
Sbjct: 165 tgcgccccgctcatgctccgcctcgcatggca 196



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>gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complete cds
          Length = 1192

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 170 tgcgcccccntcaggctccgcctcgcatggca 201
           ||||||||| ||| |||||||||||| |||||
Sbjct: 91  tgcgcccccatcatgctccgcctcgcgtggca 122



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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    ctcctcgcctcgctccccgcc 49
             |||||||||||||||||||||
Sbjct: 23905 ctcctcgcctcgctccccgcc 23885



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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
           insert sequence
          Length = 1405

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 29  ctcctcgcctcgctccccgcc 49
           |||||||||||||||||||||
Sbjct: 414 ctcctcgcctcgctccccgcc 434



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>gb|AY104492.1| Zea mays PCO104002 mRNA sequence
          Length = 1052

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 170 tgcgcccccntcaggctccgcctcgcatggca 201
           ||||||||  ||| ||||||||||||||||||
Sbjct: 179 tgcgccccgctcatgctccgcctcgcatggca 210



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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 111   acctgcgccnggtcgacggggcgcgcc 137
             ||||||||| ||||||||||| |||||
Sbjct: 69456 acctgcgcctggtcgacggggtgcgcc 69430



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>gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia retrotransposon ji,
             complete sequence; and helitron Mo17_14594, complete
             sequence
          Length = 57607

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ctcgcctcgctccccgcccc 51
             ||||||||||||||||||||
Sbjct: 27235 ctcgcctcgctccccgcccc 27216



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>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
              gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ctcgcctcgctccccgcccc 51
              ||||||||||||||||||||
Sbjct: 156107 ctcgcctcgctccccgcccc 156126



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>emb|AL645685.12| Mouse DNA sequence from clone RP23-198I4 on chromosome 1 Contains a
              ribosomal protein S13 (Rps13) pseudogene, a ribosomal
              protein S27 (Rps27) pseudogene a novel genes and the 3' end
              of a novel gene, complete sequence
          Length = 218950

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                      
Query: 31     cctcgcctcgc-tccccgccccgcccatttcttctcttct 69
              ||||||||||| ||||| |||| ||| |||||||||||||
Sbjct: 209097 cctcgcctcgcctcccctcccctcccctttcttctcttct 209058



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>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence
          Length = 176679

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ctcgcctcgctccccgcccc 51
              ||||||||||||||||||||
Sbjct: 169162 ctcgcctcgctccccgcccc 169143



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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
             complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   gccctccgtgccctcatcgccccc 163
             |||||||||||||||| |||||||
Sbjct: 83574 gccctccgtgccctcagcgccccc 83597



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>gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91200

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   cggggcgcgccgcgccctcc 146
             ||||||||||||||||||||
Sbjct: 51853 cggggcgcgccgcgccctcc 51872



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     cgacggggcgcgccgcgccc 143
               ||||||||||||||||||||
Sbjct: 2592165 cgacggggcgcgccgcgccc 2592146



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>ref|NM_207746.1| Eremothecium gossypii AAL149Cp (AAL149C), mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 140 gccctccgtgccctcatcgccccc 163
           |||||||||||||||| |||||||
Sbjct: 492 gccctccgtgccctcagcgccccc 469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,278,247
Number of Sequences: 3902068
Number of extensions: 1278247
Number of successful extensions: 101763
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100991
Number of HSP's gapped (non-prelim): 772
length of query: 210
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 188
effective length of database: 17,147,199,772
effective search space: 3223673557136
effective search space used: 3223673557136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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