ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 48 0.003
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.010
3gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.010
4gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.010
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.010
6ref|XM_368253.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 0.62
7ref|XM_464977.1| Oryza sativa (japonica cultivar-group), mRNA 38 2.5
8ref|NM_001003207.1| Canis familiaris guanylate cyclase 2D, membr... 38 2.5
9gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 2.5
10gb|AC175200.2| Sporobolomyces roseus clone JGIBAIF-29B10, comple... 38 2.5
11gb|AC110133.5| Rattus norvegicus 3 BAC CH230-40N24 (Children's H... 38 2.5
12ref|NM_000180.1| Homo sapiens guanylate cyclase 2D, membrane (re... 38 2.5
13ref|NM_001007464.1| Homo sapiens RWD domain containing 1 (RWDD1)... 38 2.5
14ref|NM_016104.2| Homo sapiens RWD domain containing 1 (RWDD1), t... 38 2.5
15ref|NM_015952.2| Homo sapiens RWD domain containing 1 (RWDD1), t... 38 2.5
16ref|XM_572492.1| Cryptococcus neoformans var. neoformans JEC21 a... 38 2.5
17ref|XM_572493.1| Cryptococcus neoformans var. neoformans JEC21 a... 38 2.5
18ref|XM_850484.1| PREDICTED: Canis familiaris guanylate cyclase E... 38 2.5
19emb|AL121953.21|HSDJ493F7 Human DNA sequence from clone RP3-493F... 38 2.5
20emb|Y15484.1|CFY15484 Canis familiaris gene encoding retinal gua... 38 2.5
21emb|Y15483.1|CFY15483 Canis familiaris mRNA for retinal guanylat... 38 2.5
22emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segmen... 38 2.5
23gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, ... 38 2.5
24gb|AC107913.7| Homo sapiens chromosome 17, clone CTD-3051C7, com... 38 2.5
25gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 2.5
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 2.5
27dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.5
28dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic D... 38 2.5
29emb|AJ323990.1|HSA323990 Homo sapiens genomic sequence surroundi... 38 2.5
30dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 2.5
31gb|M92432.1|HUMRETGC Homo sapiens retinal guanylyl cyclase (retG... 38 2.5
32emb|AJ222657.1|HSRSGCG Homo sapiens gene encoding retina-specifi... 38 2.5
33dbj|AB003404.1| Halorubrum sodomense DNA, ribosomal spacer regio... 38 2.5
34ref|NM_129532.3| Arabidopsis thaliana nucleic acid binding AT2G3... 36 9.7
35ref|XM_465458.1| Oryza sativa (japonica cultivar-group), mRNA 36 9.7
36ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predic... 36 9.7
37gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 36 9.7
38gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial ... 36 9.7
39gb|AY022019.1| Oryza sativa microsatellite MRG4344 containing (T... 36 9.7
40gb|BT015881.1| Arabidopsis thaliana At2g39740 gene, complete cds 36 9.7
41gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome... 36 9.7
42gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 36 9.7
43ref|XM_658947.1| Aspergillus nidulans FGSC A4 hypothetical prote... 36 9.7
44gb|AY536253.1| Chlamydomonas reinhardtii chloroplast sulfate-bin... 36 9.7
45gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 36 9.7
46ref|XM_001004021.1| PREDICTED: Mus musculus hypothetical protein... 36 9.7
47emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 36 9.7
48gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome... 36 9.7
49gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 36 9.7
50emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chr... 36 9.7
51emb|AL031275.1|HS10C16 Human DNA sequence from clone RP1-10C16 o... 36 9.7
52gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 36 9.7
53emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 36 9.7
54emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encodi... 36 9.7
55gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, co... 36 9.7
56dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 36 9.7
57gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ... 36 9.7
58gb|AC022826.12| Homo sapiens chromosome 8, clone RP11-99A14, com... 36 9.7
59dbj|AK155070.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 36 9.7
60dbj|AK155065.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 36 9.7
61gb|CP000249.1| Frankia sp. CcI3, complete genome 36 9.7
62gb|AC009516.19| Homo sapiens chromosome 22 clone p393 map 22q11,... 36 9.7
63gb|AC018751.30| Homo sapiens clone b9j16, complete sequence 36 9.7
64dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
65dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
66dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
67dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
68dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
69emb|BX819613.1|CNS0A901 Arabidopsis thaliana Full-length cDNA Co... 36 9.7
70emb|BX819015.1|CNS0A8X0 Arabidopsis thaliana Full-length cDNA Co... 36 9.7
71emb|BX820989.1|CNS0A7X1 Arabidopsis thaliana Full-length cDNA Co... 36 9.7
72gb|AE004863.1| Pseudomonas aeruginosa PAO1, section 424 of 529 o... 36 9.7
73dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
74dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
75dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
76dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
77dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
78dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic D... 36 9.7
79emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 36 9.7
80emb|AL807741.8| Mouse DNA sequence from clone RP23-224B9 on chro... 36 9.7
81gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 9.7
82dbj|AP000553.1| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 36 9.7 
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 48.1 bits (24), Expect = 0.003
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 32      gccgcccgtccgtccacccaccgc 55
               ||||||||||||||||||||||||
Sbjct: 2118715 gccgcccgtccgtccacccaccgc 2118738
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 2        gaagctagggtttttctctcccg 24
                |||||||||||||||||||||||
Sbjct: 12843836 gaagctagggtttttctctcccg 12843858
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>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 2     gaagctagggtttttctctcccg 24
             |||||||||||||||||||||||
Sbjct: 82052 gaagctagggtttttctctcccg 82074
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>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 2     gaagctagggtttttctctcccg 24
             |||||||||||||||||||||||
Sbjct: 95673 gaagctagggtttttctctcccg 95651
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.010
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 2        gaagctagggtttttctctcccg 24
                |||||||||||||||||||||||
Sbjct: 12840599 gaagctagggtttttctctcccg 12840621
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>ref|XM_368253.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00991.4) partial mRNA
          Length = 2718

 Score = 40.1 bits (20), Expect = 0.62
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   cccgcctggccgccgcccgt 40
            ||||||||||||||||||||
Sbjct: 2328 cccgcctggccgccgcccgt 2347
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>ref|XM_464977.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1494

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 29  gccgccgcccgtccgtcca 47
           |||||||||||||||||||
Sbjct: 124 gccgccgcccgtccgtcca 142
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>ref|NM_001003207.1| Canis familiaris guanylate cyclase 2D, membrane (retina-specific)
           (GUCY2D), mRNA
          Length = 4702

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 424 cccgcctggccgccgcccg 442
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
              sequence
          Length = 1194300

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 29     gccgccgcccgtccgtccaccca 51
              |||||||||||||| ||||||||
Sbjct: 196595 gccgccgcccgtccctccaccca 196617
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>gb|AC175200.2| Sporobolomyces roseus clone JGIBAIF-29B10, complete sequence
          Length = 40413

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    tttctctcccgcctggccg 32
             |||||||||||||||||||
Sbjct: 38953 tttctctcccgcctggccg 38935
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>gb|AC110133.5| Rattus norvegicus 3 BAC CH230-40N24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 32052

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    tttttctctcccgcctggccgcc 34
             ||||||||||||||||| |||||
Sbjct: 29252 tttttctctcccgcctgcccgcc 29274
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>ref|NM_000180.1| Homo sapiens guanylate cyclase 2D, membrane (retina-specific)
           (GUCY2D), mRNA
          Length = 3621

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 303 cccgcctggccgccgcccg 321
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>ref|NM_001007464.1| Homo sapiens RWD domain containing 1 (RWDD1), transcript variant
          3, mRNA
          Length = 1195

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 cccgcctggccgccgcccg 39
          |||||||||||||||||||
Sbjct: 64 cccgcctggccgccgcccg 82
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>ref|NM_016104.2| Homo sapiens RWD domain containing 1 (RWDD1), transcript variant
          2, mRNA
          Length = 1323

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 cccgcctggccgccgcccg 39
          |||||||||||||||||||
Sbjct: 64 cccgcctggccgccgcccg 82
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>ref|NM_015952.2| Homo sapiens RWD domain containing 1 (RWDD1), transcript variant
          1, mRNA
          Length = 1081

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 cccgcctggccgccgcccg 39
          |||||||||||||||||||
Sbjct: 64 cccgcctggccgccgcccg 82
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>ref|XM_572492.1| Cryptococcus neoformans var. neoformans JEC21 arsenite-resistant
            protein ASR2 (CNH03230) partial mRNA
          Length = 3059

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 29   gccgccgcccgtccgtccaccca 51
            |||||||||||||| ||||||||
Sbjct: 2662 gccgccgcccgtccctccaccca 2640
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>ref|XM_572493.1| Cryptococcus neoformans var. neoformans JEC21 arsenite-resistant
            protein ASR2 (CNH03230) partial mRNA
          Length = 3087

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 29   gccgccgcccgtccgtccaccca 51
            |||||||||||||| ||||||||
Sbjct: 2690 gccgccgcccgtccctccaccca 2668
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>ref|XM_850484.1| PREDICTED: Canis familiaris guanylate cyclase E (GUCY2D), mRNA
          Length = 4688

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 424 cccgcctggccgccgcccg 442
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>emb|AL121953.21|HSDJ493F7 Human DNA sequence from clone RP3-493F7 on chromosome 6q22.1-22.33
             Contains two novel genes, the 5' part of the gene for a
             novel protein similar to murine BET3, the gene for PTD013
             protein (CGI-24) protein and a CpG island, complete
             sequence
          Length = 102337

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    cccgcctggccgccgcccg 39
             |||||||||||||||||||
Sbjct: 67559 cccgcctggccgccgcccg 67577
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>emb|Y15484.1|CFY15484 Canis familiaris gene encoding retinal guanylate cyclase E
          Length = 14515

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 703 cccgcctggccgccgcccg 721
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>emb|Y15483.1|CFY15483 Canis familiaris mRNA for retinal guanylate cyclase E
          Length = 4702

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 424 cccgcctggccgccgcccg 442
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>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7
          Length = 349652

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     cgcctggccgccgcccgtc 41
              |||||||||||||||||||
Sbjct: 320037 cgcctggccgccgcccgtc 320019
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>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence
          Length = 187718

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     cccgcctggccgccgcccg 39
              |||||||||||||||||||
Sbjct: 166514 cccgcctggccgccgcccg 166532
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>gb|AC107913.7| Homo sapiens chromosome 17, clone CTD-3051C7, complete sequence
          Length = 128953

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     cccgcctggccgccgcccg 39
              |||||||||||||||||||
Sbjct: 119974 cccgcctggccgccgcccg 119956
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 21     cccgcctggccgccgcccgtccg 43
              |||| ||||||||||||||||||
Sbjct: 576149 cccggctggccgccgcccgtccg 576171
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 29       gccgccgcccgtccgtcca 47
                |||||||||||||||||||
Sbjct: 10726685 gccgccgcccgtccgtcca 10726667



 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 29       gccgccgcccgtccgtcc 46
                ||||||||||||||||||
Sbjct: 15309527 gccgccgcccgtccgtcc 15309510
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>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0018M09
          Length = 157377

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     gccgccgcccgtccgtcca 47
              |||||||||||||||||||
Sbjct: 144375 gccgccgcccgtccgtcca 144357
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>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_D03
          Length = 169378

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    gccgccgcccgtccgtcca 47
             |||||||||||||||||||
Sbjct: 66166 gccgccgcccgtccgtcca 66148
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>emb|AJ323990.1|HSA323990 Homo sapiens genomic sequence surrounding NotI site, clone NL1-UL8C
          Length = 533

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 190 cccgcctggccgccgcccg 172
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 21      cccgcctggccgccgcccg 39
               |||||||||||||||||||
Sbjct: 2580173 cccgcctggccgccgcccg 2580155
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>gb|M92432.1|HUMRETGC Homo sapiens retinal guanylyl cyclase (retGC) mRNA, complete cds
          Length = 3621

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 303 cccgcctggccgccgcccg 321
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>emb|AJ222657.1|HSRSGCG Homo sapiens gene encoding retina-specific guanylyl cyclase
          Length = 12810

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  cccgcctggccgccgcccg 39
           |||||||||||||||||||
Sbjct: 607 cccgcctggccgccgcccg 625
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>dbj|AB003404.1| Halorubrum sodomense DNA, ribosomal spacer region containing
           tRNA-Ala
          Length = 517

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  cccgtccgtccacccaccg 54
           |||||||||||||||||||
Sbjct: 82  cccgtccgtccacccaccg 100
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>ref|NM_129532.3| Arabidopsis thaliana nucleic acid binding AT2G39740 mRNA, complete
           cds
          Length = 2142

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 6   ctagggtttttctctccc 23
           ||||||||||||||||||
Sbjct: 114 ctagggtttttctctccc 97
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>ref|XM_465458.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 966

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 29  gccgccgcccgtccgtcc 46
           ||||||||||||||||||
Sbjct: 243 gccgccgcccgtccgtcc 226
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>ref|NM_192784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 24  gcctggccgccgcccgtc 41
           ||||||||||||||||||
Sbjct: 788 gcctggccgccgcccgtc 771
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 37     ccgtccgtccacccaccg 54
              ||||||||||||||||||
Sbjct: 157182 ccgtccgtccacccaccg 157199
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>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence
          Length = 114045

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    gccgccgcccgtccgtcc 46
             ||||||||||||||||||
Sbjct: 44606 gccgccgcccgtccgtcc 44623
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>gb|AY022019.1| Oryza sativa microsatellite MRG4344 containing (TC)X13, genomic
           sequence
          Length = 226

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 4   agctagggtttttctctc 21
           ||||||||||||||||||
Sbjct: 89  agctagggtttttctctc 106
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>gb|BT015881.1| Arabidopsis thaliana At2g39740 gene, complete cds
          Length = 1706

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 6  ctagggtttttctctccc 23
          ||||||||||||||||||
Sbjct: 52 ctagggtttttctctccc 35
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>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    ctcccgcctggccgccgc 36
             ||||||||||||||||||
Sbjct: 71319 ctcccgcctggccgccgc 71302
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 37    ccgtccgtccacccaccg 54
             ||||||||||||||||||
Sbjct: 28916 ccgtccgtccacccaccg 28933
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>ref|XM_658947.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6435.2), mRNA
          Length = 900

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 38  cgtccgtccacccaccgc 55
           ||||||||||||||||||
Sbjct: 373 cgtccgtccacccaccgc 356
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>gb|AY536253.1| Chlamydomonas reinhardtii chloroplast sulfate-binding protein (Sbp)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1853

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 16   tctctcccgcctggccgccgcc 37
            ||||| ||||||||||||||||
Sbjct: 1423 tctctaccgcctggccgccgcc 1402
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>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 22    ccgcctggccgccgcccg 39
             ||||||||||||||||||
Sbjct: 60920 ccgcctggccgccgcccg 60937
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>ref|XM_001004021.1| PREDICTED: Mus musculus hypothetical protein LOC668855 (LOC668855),
           mRNA
          Length = 918

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 18  tctcccgcctggccgccg 35
           ||||||||||||||||||
Sbjct: 294 tctcccgcctggccgccg 311
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 23      cgcctggccgccgcccgt 40
               ||||||||||||||||||
Sbjct: 4025425 cgcctggccgccgcccgt 4025408
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>gb|AC128698.4| Mus musculus BAC clone RP24-127J4 from chromosome 9, complete sequence
          Length = 148461

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     gggtttttctctcccgcc 26
             ||||||||||||||||||
Sbjct: 24402 gggtttttctctcccgcc 24419
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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24,
              complete sequence
          Length = 142852

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 1      ggaagctagggtttttct 18
              ||||||||||||||||||
Sbjct: 114298 ggaagctagggtttttct 114281
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>emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3
              Contains the PRDX6 gene for peroxiredoxin 6, gene MGC43026,
              a novel gene, the 3' end of a novel gene (FLJ45235) and two
              CpG islands, complete sequence
          Length = 159771

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     cccgcctggccgccgccc 38
              ||||||||||||||||||
Sbjct: 139527 cccgcctggccgccgccc 139544
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>emb|AL031275.1|HS10C16 Human DNA sequence from clone RP1-10C16 on chromosome 1q24.1-24.3
             Contains two novel genes and a CpG island, complete
             sequence
          Length = 109821

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    cccgcctggccgccgccc 38
             ||||||||||||||||||
Sbjct: 29003 cccgcctggccgccgccc 28986
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 17      ctctcccgcctggccgcc 34
               ||||||||||||||||||
Sbjct: 3129403 ctctcccgcctggccgcc 3129420
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 22     ccgcctggccgccgcccg 39
              ||||||||||||||||||
Sbjct: 191131 ccgcctggccgccgcccg 191148
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>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide
             synthases, ORFs 1 to 5
          Length = 53784

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 22    ccgcctggccgccgcccg 39
             ||||||||||||||||||
Sbjct: 44515 ccgcctggccgccgcccg 44532
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>gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, complete sequence
          Length = 166018

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     cccgcctggccgccgccc 38
              ||||||||||||||||||
Sbjct: 157322 cccgcctggccgccgccc 157305
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 25      cctggccgccgcccgtcc 42
               ||||||||||||||||||
Sbjct: 3083752 cctggccgccgcccgtcc 3083769
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>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     ctagggtttttctctccc 23
             ||||||||||||||||||
Sbjct: 18398 ctagggtttttctctccc 18381
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>gb|AC022826.12| Homo sapiens chromosome 8, clone RP11-99A14, complete sequence
          Length = 168839

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     cccgcctggccgccgccc 38
              ||||||||||||||||||
Sbjct: 148596 cccgcctggccgccgccc 148613
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>dbj|AK155070.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630119F20
           product:sprouty protein with EVH-1 domain 1, related
           sequence, full insert sequence
          Length = 3248

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 18  tctcccgcctggccgccg 35
           ||||||||||||||||||
Sbjct: 228 tctcccgcctggccgccg 211
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>dbj|AK155065.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630119B14
           product:sprouty protein with EVH-1 domain 1, related
           sequence, full insert sequence
          Length = 4284

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 18  tctcccgcctggccgccg 35
           ||||||||||||||||||
Sbjct: 190 tctcccgcctggccgccg 173
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 31      cgccgcccgtccgtccac 48
               ||||||||||||||||||
Sbjct: 5278212 cgccgcccgtccgtccac 5278195
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>gb|AC009516.19| Homo sapiens chromosome 22 clone p393 map 22q11, complete sequence
          Length = 169237

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 21     cccgcctggccgccgccc 38
              ||||||||||||||||||
Sbjct: 153828 cccgcctggccgccgccc 153811
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>gb|AC018751.30| Homo sapiens clone b9j16, complete sequence
          Length = 166447

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    cccgcctggccgccgccc 38
             ||||||||||||||||||
Sbjct: 35599 cccgcctggccgccgccc 35616
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 1        ggaagctagggtttttct 18
                ||||||||||||||||||
Sbjct: 23272677 ggaagctagggtttttct 23272694
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 4       agctagggtttttctctc 21
               ||||||||||||||||||
Sbjct: 1937786 agctagggtttttctctc 1937803
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 29/33 (87%)
 Strand = Plus / Minus

                                                 
Query: 30       ccgccgcccgtccgtccacccaccgccnccgcc 62
                ||||||||||||| ||| |||||| || |||||
Sbjct: 12176117 ccgccgcccgtccctccgcccaccaccaccgcc 12176085
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 37       ccgtccgtccacccaccg 54
                ||||||||||||||||||
Sbjct: 20485437 ccgtccgtccacccaccg 20485454



 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     ctcccgcctggccgccgc 36
              ||||||||||||||||||
Sbjct: 553920 ctcccgcctggccgccgc 553903
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 24       gcctggccgccgcccgtc 41
                ||||||||||||||||||
Sbjct: 24391957 gcctggccgccgcccgtc 24391974
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>emb|BX819613.1|CNS0A901 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB93ZH10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1865

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 6   ctagggtttttctctccc 23
           ||||||||||||||||||
Sbjct: 114 ctagggtttttctctccc 97
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>emb|BX819015.1|CNS0A8X0 Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTFB38ZA06 of Flowers and buds of strain col-0
          of Arabidopsis thaliana (thale cress)
          Length = 1746

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 6  ctagggtttttctctccc 23
          ||||||||||||||||||
Sbjct: 64 ctagggtttttctctccc 47
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>emb|BX820989.1|CNS0A7X1 Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTPGH89ZG02 of Hormone Treated Callus of strain
          col-0 of Arabidopsis thaliana (thale cress)
          Length = 1738

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 6  ctagggtttttctctccc 23
          ||||||||||||||||||
Sbjct: 53 ctagggtttttctctccc 36
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>gb|AE004863.1| Pseudomonas aeruginosa PAO1, section 424 of 529 of the complete
            genome
          Length = 10535

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 20   tcccgcctggccgccgcc 37
            ||||||||||||||||||
Sbjct: 2255 tcccgcctggccgccgcc 2272
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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 29/33 (87%)
 Strand = Plus / Minus

                                              
Query: 30    ccgccgcccgtccgtccacccaccgccnccgcc 62
             ||||||||||||| ||| |||||| || |||||
Sbjct: 13139 ccgccgcccgtccctccgcccaccaccaccgcc 13107
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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 29/33 (87%)
 Strand = Plus / Minus

                                               
Query: 30     ccgccgcccgtccgtccacccaccgccnccgcc 62
              ||||||||||||| ||| |||||| || |||||
Sbjct: 118906 ccgccgcccgtccctccgcccaccaccaccgcc 118874
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 24     gcctggccgccgcccgtc 41
              ||||||||||||||||||
Sbjct: 137861 gcctggccgccgcccgtc 137878
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>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0507H12
          Length = 143030

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      agctagggtttttctctc 21
              ||||||||||||||||||
Sbjct: 142365 agctagggtttttctctc 142382
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>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0495H05
          Length = 205595

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     agctagggtttttctctc 21
             ||||||||||||||||||
Sbjct: 22083 agctagggtttttctctc 22100
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>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0063K04
          Length = 158792

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     gccgccgcccgtccgtcc 46
              ||||||||||||||||||
Sbjct: 120648 gccgccgcccgtccgtcc 120631
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    cgcctggccgccgcccgt 40
             ||||||||||||||||||
Sbjct: 25201 cgcctggccgccgcccgt 25184
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>emb|AL807741.8| Mouse DNA sequence from clone RP23-224B9 on chromosome 2, complete
             sequence
          Length = 165777

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    tctcccgcctggccgccg 35
             ||||||||||||||||||
Sbjct: 47308 tctcccgcctggccgccg 47325
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 1        ggaagctagggtttttct 18
                ||||||||||||||||||
Sbjct: 23582587 ggaagctagggtttttct 23582604
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>dbj|AP000553.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
             clone:KB1440D3
          Length = 164946

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    cccgcctggccgccgccc 38
             ||||||||||||||||||
Sbjct: 81182 cccgcctggccgccgccc 81165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 503,381
Number of Sequences: 3902068
Number of extensions: 503381
Number of successful extensions: 36531
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35512
Number of HSP's gapped (non-prelim): 1019
length of query: 65
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 44
effective length of database: 17,151,101,840
effective search space: 754648480960
effective search space used: 754648480960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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