Clone Name | bart07c02 |
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Clone Library Name | barley_pub |
>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 513 Score = 59.7 bits (143), Expect = 3e-09 Identities = 30/85 (35%), Positives = 44/85 (51%) Frame = +1 Query: 178 AFLXNRDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGER 357 + L N R ++W+++++ P P T PA V+HI RTNF Y G Sbjct: 54 SLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLT 113 Query: 358 AISMLVDFLGHGLFNSNGEQWLWQR 432 + DFLG G+FN++GE W +QR Sbjct: 114 FYQSINDFLGDGIFNADGESWKFQR 138
>C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 514 Score = 58.5 bits (140), Expect = 7e-09 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%) Frame = +1 Query: 178 AFLXNRDRFLEWSTELIVAXPDLRMGFWIPGMTTG---FVTGXPADVEHIRRTNFAHYPX 348 +F N R ++W ++++ P F + G T G +TG P+ V+HI + F++Y Sbjct: 59 SFRKNLHRRIQWLSDIVQISPSAT--FQLDG-TLGKRQIITGNPSTVQHILKNQFSNYQK 115 Query: 349 GERAISMLVDFLGHGLFNSNGEQWLWQR 432 G + L DFLG G+FN+NG W +QR Sbjct: 116 GTTFTNTLSDFLGTGIFNTNGPNWKFQR 143
>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)| Length = 553 Score = 57.0 bits (136), Expect = 2e-08 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%) Frame = +1 Query: 184 LXNRDRFLEWSTE-----------LIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTN 330 + RDR +W TE I A P L G+ T VT P ++EH+ +T Sbjct: 43 IEQRDRMHDWITENLRACGGTYQTCICAVPFLAKK---QGLVT--VTCDPKNIEHMLKTR 97 Query: 331 FAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432 F +YP G ++ DFLG G+FNS+G+ WL+QR Sbjct: 98 FDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQR 131
>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)| (P450-dependent fatty acid omega-hydroxylase) Length = 513 Score = 52.8 bits (125), Expect = 4e-07 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Frame = +1 Query: 184 LXNRDRFLEWSTELIVAX----PDLRMGFWIPGMTTGF--VTGXPADVEHIRRTNFAHYP 345 + NR R +W + + A M GF VT P +VEHI +T F +YP Sbjct: 46 IANRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYP 105 Query: 346 XGERAISMLVDFLGHGLFNSNGEQWLWQR 432 G + D LG G+FNS+G+ WL QR Sbjct: 106 KGPMWRAAFHDLLGQGIFNSDGDTWLMQR 134
>CP52I_CANMA (Q12586) Cytochrome P450 52A9 (EC 1.14.14.-) (CYPLIIA9)| (Alkane-inducible P450-ALK5-A) Length = 521 Score = 39.3 bits (90), Expect = 0.004 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Frame = +1 Query: 190 NRDRFLEWSTELIVAXPDLRMGFWIPGMTTG--FVTGXPADVEHIRRTNFAHYPXGERAI 363 N+ R E++ E A P ++G ++ + T VT P +++ I T F + G+R + Sbjct: 66 NKGRAQEYNDEKFAAGPKPKVGTYLFKLFTKDVLVTKDPENIKAILATQFEDFSLGKR-L 124 Query: 364 SMLVDFLGHGLFNSNGEQWLWQR 432 LG+G+F +GE W R Sbjct: 125 DFFKPLLGYGIFTLDGEGWKHSR 147
>CP52T_CANMA (Q12585) Cytochrome P450 52D1 (EC 1.14.14.-) (CYPLIID1)| (Alkane-inducible P450-ALK4) Length = 505 Score = 33.5 bits (75), Expect = 0.23 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = +1 Query: 190 NRDRFLEWSTELIVAXPD---LRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERA 360 N+ R +E+S + ++ P + F IP + +T P +++ + F + G R Sbjct: 59 NQGRLIEFSVKRFLSSPHQTFMNRAFGIPII----LTRDPVNIKAMLAVQFDEFSLGLR- 113 Query: 361 ISMLVDFLGHGLFNSNGEQWLWQR 432 + LG+G+F S+GE W R Sbjct: 114 YNQFEPLLGNGIFTSDGEPWKHSR 137
>CP52P_CANTR (P30612) Cytochrome P450 52C1 (EC 1.14.14.-) (CYPLIIC1)| (Alkane-inducible P450-ALK7) Length = 505 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = +1 Query: 271 MTTGFVTGXPADVEHIRR----TNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432 +T G T D+E+IR T + G R I+ L F+G G+F S G+ W R Sbjct: 83 ITLGKTTYVTKDIENIRHILSATEMNSWNLGARPIA-LRPFIGDGIFASEGQSWKHSR 139
>CP52K_CANMA (Q12589) Cytochrome P450 52A11 (EC 1.14.14.-) (CYPLIIA11)| (Alkane-inducible P450-ALK8) Length = 519 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 289 TGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432 T P +++ + T F + G+R +S LG G+F +GE W R Sbjct: 99 TKDPENIKAMLATQFNDFTLGQR-LSYFAPLLGKGIFTLDGEGWKHSR 145
>TFR1_CHICK (Q90997) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)| Length = 776 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = -2 Query: 269 PGIQKPILRSGXATMSSVDHSRKRSRFXRNAGRWPSSGCLLRPWVAGFFXARVLARWXEM 90 PG+ K +G T ++ +R S +N G P + W AG + A W E Sbjct: 427 PGVAK----AGTGTAILLELARVISDIVKNEGYKPRRSIIFASWSAGDYGAVGATEWLEG 482 Query: 89 YS 84 YS Sbjct: 483 YS 484
>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1| Length = 965 Score = 28.9 bits (63), Expect = 5.7 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 300 RVAGDEAGGHPGDPEAHPEVGAG 232 R DEA G PG P HP+ G G Sbjct: 327 RCGEDEAAGPPGPPPPHPQRGLG 349
>CP52G_CANTR (P30609) Cytochrome P450 52A7 (EC 1.14.14.-) (CYPLIIA7)| (Alkane-inducible P450-ALK4) Length = 507 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 289 TGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432 T P +++ + T F + G R I LG+G+F +GE W R Sbjct: 93 TRDPENIKALLATQFNDFSLGGR-IKFFKPLLGYGIFTLDGEGWKHSR 139
>FGF11_MOUSE (P70378) Fibroblast growth factor 11 (FGF-11) (Fibroblast growth| factor homologous factor 3) (FHF-3) Length = 225 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = +1 Query: 193 RDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISML 372 +DR E + IV R GF++ G + G P D T+F P G R +++ Sbjct: 60 QDRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSF--THFNLIPVGLRVVTIQ 117 Query: 373 VDFLGH 390 LGH Sbjct: 118 SAKLGH 123
>FGF11_HUMAN (Q92914) Fibroblast growth factor 11 (FGF-11) (Fibroblast growth| factor homologous factor 3) (FHF-3) Length = 225 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1 Query: 196 DRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISMLV 375 DR E + IV R GF++ G + G P D T+F P G R +++ Sbjct: 61 DRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSF--THFNLIPVGLRVVTIQS 118 Query: 376 DFLGH 390 LGH Sbjct: 119 AKLGH 123
>CP52E_CANMA (P24458) Cytochrome P450 52A5 (EC 1.14.14.-) (CYPLIIA5)| (Alkane-inducible P450-ALK2-A) (CYP52A3-B) Length = 523 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/81 (22%), Positives = 33/81 (40%) Frame = +1 Query: 190 NRDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISM 369 N + +++ + P + GM +T P +++ + T F + G R + Sbjct: 70 NAGKLADYADQTFDEYPHHSFYMTVAGMLKIVLTVDPENIKAVLATQFNDFALGARH-AH 128 Query: 370 LVDFLGHGLFNSNGEQWLWQR 432 LG G+F +GE W R Sbjct: 129 FDPLLGDGIFTLDGEGWKHSR 149
>TFR1_MOUSE (Q62351) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)| Length = 763 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 6/69 (8%) Frame = -2 Query: 275 VIPGIQKPILRSGXATMSSVDH------SRKRSRFXRNAGRWPSSGCLLRPWVAGFFXAR 114 V+ G Q+ L +G A SSV ++ S G PS + W AG F A Sbjct: 405 VVVGAQRDALGAGVAAKSSVGTGLLLKLAQVFSDMISKDGFRPSRSIIFASWTAGDFGAV 464 Query: 113 VLARWXEMY 87 W E Y Sbjct: 465 GATEWLEGY 473
>ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor| Length = 253 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 288 DEAGGHPGDPEAHPEVGAGDDELGG 214 D+AGG G+ E E AGD++ GG Sbjct: 39 DDAGGDGGEEENEGEEHAGDEDAGG 63
>DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute carrier family| 25 member 10) Length = 287 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 262 IPGMTTGFVTGXPADVEHIRRTNFAHYPXGER 357 + G+ GFV G PAD+ ++R N P G+R Sbjct: 108 VSGLAGGFV-GTPADLVNVRMQNDVKLPQGQR 138
>CP2S1_HUMAN (Q96SQ9) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)| Length = 504 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Frame = +1 Query: 349 GERAISMLVD-FLGHGLFNSNGEQW 420 G ++ML F GHG+F SNGE+W Sbjct: 100 GRGTVAMLEGTFDGHGVFFSNGERW 124
>CP4E3_DROME (Q9VL92) Cytochrome P450 4e3 (EC 1.14.-.-) (CYPIVE3)| Length = 526 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = +1 Query: 256 FWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQW 420 FWI G ++ V P +E+I N +L +LGHGL S G +W Sbjct: 73 FWI-GYSSHIVMTNPKQLEYI--LNSQQLIQKSTIYDLLHPWLGHGLLTSFGSKW 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,213,078 Number of Sequences: 219361 Number of extensions: 573035 Number of successful extensions: 2200 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2200 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)