ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-de... 60 3e-09
2C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-de... 59 7e-09
3C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-) 57 2e-08
4C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXX... 53 4e-07
5CP52I_CANMA (Q12586) Cytochrome P450 52A9 (EC 1.14.14.-) (CYPLII... 39 0.004
6CP52T_CANMA (Q12585) Cytochrome P450 52D1 (EC 1.14.14.-) (CYPLII... 33 0.23
7CP52P_CANTR (P30612) Cytochrome P450 52C1 (EC 1.14.14.-) (CYPLII... 31 1.5
8CP52K_CANMA (Q12589) Cytochrome P450 52A11 (EC 1.14.14.-) (CYPLI... 30 2.5
9TFR1_CHICK (Q90997) Transferrin receptor protein 1 (TfR1) (TR) (... 29 4.3
10LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1 29 5.7
11CP52G_CANTR (P30609) Cytochrome P450 52A7 (EC 1.14.14.-) (CYPLII... 29 5.7
12FGF11_MOUSE (P70378) Fibroblast growth factor 11 (FGF-11) (Fibro... 29 5.7
13FGF11_HUMAN (Q92914) Fibroblast growth factor 11 (FGF-11) (Fibro... 28 7.4
14CP52E_CANMA (P24458) Cytochrome P450 52A5 (EC 1.14.14.-) (CYPLII... 28 7.4
15TFR1_MOUSE (Q62351) Transferrin receptor protein 1 (TfR1) (TR) (... 28 9.7
16ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precu... 28 9.7
17DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute c... 28 9.7
18CP2S1_HUMAN (Q96SQ9) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1) 28 9.7
19CP4E3_DROME (Q9VL92) Cytochrome P450 4e3 (EC 1.14.-.-) (CYPIVE3) 28 9.7

>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty|
           acid omega-hydroxylase)
          Length = 513

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 30/85 (35%), Positives = 44/85 (51%)
 Frame = +1

Query: 178 AFLXNRDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGER 357
           + L N  R ++W+++++   P        P       T  PA V+HI RTNF  Y  G  
Sbjct: 54  SLLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQVFTAQPAVVQHILRTNFTCYGKGLT 113

Query: 358 AISMLVDFLGHGLFNSNGEQWLWQR 432
               + DFLG G+FN++GE W +QR
Sbjct: 114 FYQSINDFLGDGIFNADGESWKFQR 138



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>C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-dependent fatty|
           acid omega-hydroxylase)
          Length = 514

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = +1

Query: 178 AFLXNRDRFLEWSTELIVAXPDLRMGFWIPGMTTG---FVTGXPADVEHIRRTNFAHYPX 348
           +F  N  R ++W ++++   P     F + G T G    +TG P+ V+HI +  F++Y  
Sbjct: 59  SFRKNLHRRIQWLSDIVQISPSAT--FQLDG-TLGKRQIITGNPSTVQHILKNQFSNYQK 115

Query: 349 GERAISMLVDFLGHGLFNSNGEQWLWQR 432
           G    + L DFLG G+FN+NG  W +QR
Sbjct: 116 GTTFTNTLSDFLGTGIFNTNGPNWKFQR 143



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>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)|
          Length = 553

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
 Frame = +1

Query: 184 LXNRDRFLEWSTE-----------LIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTN 330
           +  RDR  +W TE            I A P L       G+ T  VT  P ++EH+ +T 
Sbjct: 43  IEQRDRMHDWITENLRACGGTYQTCICAVPFLAKK---QGLVT--VTCDPKNIEHMLKTR 97

Query: 331 FAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432
           F +YP G    ++  DFLG G+FNS+G+ WL+QR
Sbjct: 98  FDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQR 131



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>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)|
           (P450-dependent fatty acid omega-hydroxylase)
          Length = 513

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
 Frame = +1

Query: 184 LXNRDRFLEWSTELIVAX----PDLRMGFWIPGMTTGF--VTGXPADVEHIRRTNFAHYP 345
           + NR R  +W  + + A         M         GF  VT  P +VEHI +T F +YP
Sbjct: 46  IANRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYP 105

Query: 346 XGERAISMLVDFLGHGLFNSNGEQWLWQR 432
            G    +   D LG G+FNS+G+ WL QR
Sbjct: 106 KGPMWRAAFHDLLGQGIFNSDGDTWLMQR 134



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>CP52I_CANMA (Q12586) Cytochrome P450 52A9 (EC 1.14.14.-) (CYPLIIA9)|
           (Alkane-inducible P450-ALK5-A)
          Length = 521

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
 Frame = +1

Query: 190 NRDRFLEWSTELIVAXPDLRMGFWIPGMTTG--FVTGXPADVEHIRRTNFAHYPXGERAI 363
           N+ R  E++ E   A P  ++G ++  + T    VT  P +++ I  T F  +  G+R +
Sbjct: 66  NKGRAQEYNDEKFAAGPKPKVGTYLFKLFTKDVLVTKDPENIKAILATQFEDFSLGKR-L 124

Query: 364 SMLVDFLGHGLFNSNGEQWLWQR 432
                 LG+G+F  +GE W   R
Sbjct: 125 DFFKPLLGYGIFTLDGEGWKHSR 147



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>CP52T_CANMA (Q12585) Cytochrome P450 52D1 (EC 1.14.14.-) (CYPLIID1)|
           (Alkane-inducible P450-ALK4)
          Length = 505

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
 Frame = +1

Query: 190 NRDRFLEWSTELIVAXPD---LRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERA 360
           N+ R +E+S +  ++ P    +   F IP +    +T  P +++ +    F  +  G R 
Sbjct: 59  NQGRLIEFSVKRFLSSPHQTFMNRAFGIPII----LTRDPVNIKAMLAVQFDEFSLGLR- 113

Query: 361 ISMLVDFLGHGLFNSNGEQWLWQR 432
            +     LG+G+F S+GE W   R
Sbjct: 114 YNQFEPLLGNGIFTSDGEPWKHSR 137



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>CP52P_CANTR (P30612) Cytochrome P450 52C1 (EC 1.14.14.-) (CYPLIIC1)|
           (Alkane-inducible P450-ALK7)
          Length = 505

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +1

Query: 271 MTTGFVTGXPADVEHIRR----TNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432
           +T G  T    D+E+IR     T    +  G R I+ L  F+G G+F S G+ W   R
Sbjct: 83  ITLGKTTYVTKDIENIRHILSATEMNSWNLGARPIA-LRPFIGDGIFASEGQSWKHSR 139



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>CP52K_CANMA (Q12589) Cytochrome P450 52A11 (EC 1.14.14.-) (CYPLIIA11)|
           (Alkane-inducible P450-ALK8)
          Length = 519

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 289 TGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432
           T  P +++ +  T F  +  G+R +S     LG G+F  +GE W   R
Sbjct: 99  TKDPENIKAMLATQFNDFTLGQR-LSYFAPLLGKGIFTLDGEGWKHSR 145



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>TFR1_CHICK (Q90997) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)|
          Length = 776

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 269 PGIQKPILRSGXATMSSVDHSRKRSRFXRNAGRWPSSGCLLRPWVAGFFXARVLARWXEM 90
           PG+ K    +G  T   ++ +R  S   +N G  P    +   W AG + A     W E 
Sbjct: 427 PGVAK----AGTGTAILLELARVISDIVKNEGYKPRRSIIFASWSAGDYGAVGATEWLEG 482

Query: 89  YS 84
           YS
Sbjct: 483 YS 484



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>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 300 RVAGDEAGGHPGDPEAHPEVGAG 232
           R   DEA G PG P  HP+ G G
Sbjct: 327 RCGEDEAAGPPGPPPPHPQRGLG 349



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>CP52G_CANTR (P30609) Cytochrome P450 52A7 (EC 1.14.14.-) (CYPLIIA7)|
           (Alkane-inducible P450-ALK4)
          Length = 507

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 289 TGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQWLWQR 432
           T  P +++ +  T F  +  G R I      LG+G+F  +GE W   R
Sbjct: 93  TRDPENIKALLATQFNDFSLGGR-IKFFKPLLGYGIFTLDGEGWKHSR 139



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>FGF11_MOUSE (P70378) Fibroblast growth factor 11 (FGF-11) (Fibroblast growth|
           factor homologous factor 3) (FHF-3)
          Length = 225

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +1

Query: 193 RDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISML 372
           +DR  E   + IV     R GF++     G + G P D      T+F   P G R +++ 
Sbjct: 60  QDRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSF--THFNLIPVGLRVVTIQ 117

Query: 373 VDFLGH 390
              LGH
Sbjct: 118 SAKLGH 123



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>FGF11_HUMAN (Q92914) Fibroblast growth factor 11 (FGF-11) (Fibroblast growth|
           factor homologous factor 3) (FHF-3)
          Length = 225

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 196 DRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISMLV 375
           DR  E   + IV     R GF++     G + G P D      T+F   P G R +++  
Sbjct: 61  DRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSF--THFNLIPVGLRVVTIQS 118

Query: 376 DFLGH 390
             LGH
Sbjct: 119 AKLGH 123



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>CP52E_CANMA (P24458) Cytochrome P450 52A5 (EC 1.14.14.-) (CYPLIIA5)|
           (Alkane-inducible P450-ALK2-A) (CYP52A3-B)
          Length = 523

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/81 (22%), Positives = 33/81 (40%)
 Frame = +1

Query: 190 NRDRFLEWSTELIVAXPDLRMGFWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISM 369
           N  +  +++ +     P       + GM    +T  P +++ +  T F  +  G R  + 
Sbjct: 70  NAGKLADYADQTFDEYPHHSFYMTVAGMLKIVLTVDPENIKAVLATQFNDFALGARH-AH 128

Query: 370 LVDFLGHGLFNSNGEQWLWQR 432
               LG G+F  +GE W   R
Sbjct: 129 FDPLLGDGIFTLDGEGWKHSR 149



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>TFR1_MOUSE (Q62351) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)|
          Length = 763

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
 Frame = -2

Query: 275 VIPGIQKPILRSGXATMSSVDH------SRKRSRFXRNAGRWPSSGCLLRPWVAGFFXAR 114
           V+ G Q+  L +G A  SSV        ++  S      G  PS   +   W AG F A 
Sbjct: 405 VVVGAQRDALGAGVAAKSSVGTGLLLKLAQVFSDMISKDGFRPSRSIIFASWTAGDFGAV 464

Query: 113 VLARWXEMY 87
               W E Y
Sbjct: 465 GATEWLEGY 473



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>ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor|
          Length = 253

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 288 DEAGGHPGDPEAHPEVGAGDDELGG 214
           D+AGG  G+ E   E  AGD++ GG
Sbjct: 39  DDAGGDGGEEENEGEEHAGDEDAGG 63



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>DIC_HUMAN (Q9UBX3) Mitochondrial dicarboxylate carrier (Solute carrier family|
           25 member 10)
          Length = 287

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 262 IPGMTTGFVTGXPADVEHIRRTNFAHYPXGER 357
           + G+  GFV G PAD+ ++R  N    P G+R
Sbjct: 108 VSGLAGGFV-GTPADLVNVRMQNDVKLPQGQR 138



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>CP2S1_HUMAN (Q96SQ9) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)|
          Length = 504

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +1

Query: 349 GERAISMLVD-FLGHGLFNSNGEQW 420
           G   ++ML   F GHG+F SNGE+W
Sbjct: 100 GRGTVAMLEGTFDGHGVFFSNGERW 124



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>CP4E3_DROME (Q9VL92) Cytochrome P450 4e3 (EC 1.14.-.-) (CYPIVE3)|
          Length = 526

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +1

Query: 256 FWIPGMTTGFVTGXPADVEHIRRTNFAHYPXGERAISMLVDFLGHGLFNSNGEQW 420
           FWI G ++  V   P  +E+I   N            +L  +LGHGL  S G +W
Sbjct: 73  FWI-GYSSHIVMTNPKQLEYI--LNSQQLIQKSTIYDLLHPWLGHGLLTSFGSKW 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,213,078
Number of Sequences: 219361
Number of extensions: 573035
Number of successful extensions: 2200
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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