ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart07c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 325 bits (164), Expect = 7e-86 Identities = 274/312 (87%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 132574 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 132633 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 132634 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 132693 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 132694 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 132753 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||| Sbjct: 132754 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgcca 132813 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 132814 ttggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggc 132873 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 132874 tctggcagcgca 132885
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 325 bits (164), Expect = 7e-86 Identities = 274/312 (87%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 1768403 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 1768462 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 1768463 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 1768522 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 1768523 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 1768582 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||| Sbjct: 1768583 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgcca 1768642 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 1768643 ttggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggc 1768702 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 1768703 tctggcagcgca 1768714 Score = 264 bits (133), Expect = 2e-67 Identities = 295/351 (84%) Strand = Plus / Minus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 1789703 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 1789644 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||||||||| ||| ||| |||| || |||||| Sbjct: 1789643 gcctcaaggcacacccgctgctcggccacctcccggccttcgtcaggaacagccaccgct 1789584 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 1789583 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 1789524 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 1789523 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 1789464 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| |||||| | ||| |||| Sbjct: 1789463 gcaccaacttcgcaaactatcccaagggccagcacgccattggcatgctcgaggatttcc 1789404 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 1789403 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 1789353
>dbj|AK103307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125E14, full insert sequence Length = 1928 Score = 325 bits (164), Expect = 7e-86 Identities = 274/312 (87%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 174 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 233 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 234 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 293 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 294 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 353 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||| Sbjct: 354 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgcca 413 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 414 ttggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggc 473 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 474 tctggcagcgca 485
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 325 bits (164), Expect = 7e-86 Identities = 274/312 (87%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 1766124 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 1766183 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 1766184 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 1766243 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 1766244 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 1766303 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||| Sbjct: 1766304 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggcgagcacgcca 1766363 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 1766364 ttggcatgctcgaggacttcctcggccacggcctcttcaactccgacggcgagcagtggc 1766423 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 1766424 tctggcagcgca 1766435 Score = 264 bits (133), Expect = 2e-67 Identities = 295/351 (84%) Strand = Plus / Minus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 1787424 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 1787365 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||||||||| ||| ||| |||| || |||||| Sbjct: 1787364 gcctcaaggcacacccgctgctcggccacctcccggccttcgtcaggaacagccaccgct 1787305 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 1787304 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 1787245 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 1787244 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 1787185 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| |||||| | ||| |||| Sbjct: 1787184 gcaccaacttcgcaaactatcccaagggccagcacgccattggcatgctcgaggatttcc 1787125 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 1787124 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 1787074
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 301 bits (152), Expect = 1e-78 Identities = 271/312 (86%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 1715296 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 1715355 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 1715356 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 1715415 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 1715416 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 1715475 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| |||| |||| ||||| Sbjct: 1715476 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgcca 1715535 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | |||||||||||| || ||||||||||||||| |||| |||||||||| Sbjct: 1715536 ttggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggc 1715595 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 1715596 tctggcagcgca 1715607 Score = 248 bits (125), Expect = 1e-62 Identities = 293/351 (83%) Strand = Plus / Minus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 1725235 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 1725176 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||| ||||| ||| ||| |||| || |||||| Sbjct: 1725175 gcctcaaggcacacccgctgctcggccacctaccggccttcgtcaagaacagccaccgct 1725116 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 1725115 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 1725056 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 1725055 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 1724996 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| || ||| | ||| |||| Sbjct: 1724995 gcaccaacttcgcaaactatcccaagggccagcacgccattggcacgctcgaggatttcc 1724936 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 1724935 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 1724885
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 301 bits (152), Expect = 1e-78 Identities = 271/312 (86%) Strand = Plus / Plus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 1715272 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 1715331 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 1715332 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 1715391 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 1715392 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 1715451 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| |||| |||| ||||| Sbjct: 1715452 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgcca 1715511 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | |||||||||||| || ||||||||||||||| |||| |||||||||| Sbjct: 1715512 ttggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggc 1715571 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 1715572 tctggcagcgca 1715583 Score = 248 bits (125), Expect = 1e-62 Identities = 293/351 (83%) Strand = Plus / Minus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 1725211 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 1725152 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||| ||||| ||| ||| |||| || |||||| Sbjct: 1725151 gcctcaaggcacacccgctgctcggccacctaccggccttcgtcaagaacagccaccgct 1725092 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 1725091 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 1725032 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 1725031 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 1724972 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| || ||| | ||| |||| Sbjct: 1724971 gcaccaacttcgcaaactatcccaagggccagcacgccattggcacgctcgaggatttcc 1724912 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 1724911 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 1724861
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 301 bits (152), Expect = 1e-78 Identities = 271/312 (86%) Strand = Plus / Minus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 125188 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 125129 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 125128 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 125069 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 125068 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 125009 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| |||| |||| ||||| Sbjct: 125008 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgcca 124949 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | |||||||||||| || ||||||||||||||| |||| |||||||||| Sbjct: 124948 ttggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggc 124889 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 124888 tctggcagcgca 124877 Score = 248 bits (125), Expect = 1e-62 Identities = 293/351 (83%) Strand = Plus / Plus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 115249 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 115308 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||| ||||| ||| ||| |||| || |||||| Sbjct: 115309 gcctcaaggcacacccgctgctcggccacctaccggccttcgtcaagaacagccaccgct 115368 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 115369 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 115428 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 115429 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 115488 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| || ||| | ||| |||| Sbjct: 115489 gcaccaacttcgcaaactatcccaagggccagcacgccattggcacgctcgaggatttcc 115548 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 115549 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 115599
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 301 bits (152), Expect = 1e-78 Identities = 271/312 (86%) Strand = Plus / Minus Query: 122 agaagaagcccgccacccacggcctcaggaggcacccgctgctcggccacctcccggcgt 181 ||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||| Sbjct: 51625 agaagaagcccaccacccatggcctcaaggcgcacccgctgctcggccacctcccggcgt 51566 Query: 182 tcctcangaaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccg 241 || ||| ||| || ||||||||||||| ||| | || ||||||||||||| | |||| | Sbjct: 51565 tcgtcaacaacagccaccgcttcctcgactggacgacggagctcatcgtcggcagcccgg 51506 Query: 242 acctcaggatgggcttctggatccccgggatgaccaccggcttcgtcaccggcnacccgg 301 | | ||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct: 51505 agatgaggatgggcttctggatccccgggatgcgcaccggcatcatcaccggcaacccgg 51446 Query: 302 ccgacgtcgagcacatccggcgcaccaacttcgcccactaccccnagggcgagcgcgcca 361 |||||||||||||||||| |||||||||||||||| |||| ||| |||| |||| ||||| Sbjct: 51445 ccgacgtcgagcacatcctgcgcaccaacttcgccaactatcccaagggggagcacgcca 51386 Query: 362 tctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtggc 421 | |||||| | |||||||||||| || ||||||||||||||| |||| |||||||||| Sbjct: 51385 ttggcatgctcgaggacttcctcggacatggcctcttcaactccgacggcgagcagtggc 51326 Query: 422 tgtggcagcgca 433 | |||||||||| Sbjct: 51325 tctggcagcgca 51314 Score = 248 bits (125), Expect = 1e-62 Identities = 293/351 (83%) Strand = Plus / Plus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 41686 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 41745 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||| ||||| ||| ||| |||| || |||||| Sbjct: 41746 gcctcaaggcacacccgctgctcggccacctaccggccttcgtcaagaacagccaccgct 41805 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 41806 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 41865 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 41866 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 41925 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| || ||| | ||| |||| Sbjct: 41926 gcaccaacttcgcaaactatcccaagggccagcacgccattggcacgctcgaggatttcc 41985 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 41986 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 42036
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 264 bits (133), Expect = 2e-67 Identities = 295/351 (84%) Strand = Plus / Minus Query: 83 tactgtacatctccnaccaccttgcgaggaccctcgccnagaagaagcccgccacccacg 142 |||||||||| ||| ||||||| | || ||||| ||| ||||||||||| ||||||| | Sbjct: 7533 tactgtacatgtcctaccacctcacaagaaccctagccgagaagaagcccaccacccatg 7474 Query: 143 gcctcaggaggcacccgctgctcggccacctcccggcgttcctcangaaccgcgaccgct 202 |||||| | |||||||||||||||||||||||||| ||| ||| |||| || |||||| Sbjct: 7473 gcctcaaggcacacccgctgctcggccacctcccggccttcgtcaggaacagccaccgct 7414 Query: 203 tcctcgagtggtccaccgagctcatcgtcgccngccccgacctcaggatgggcttctgga 262 |||| || ||||| || |||||||||| || | |||| || | ||||| || || |||| Sbjct: 7413 tccttgattggtcgacggagctcatcgccggcagcccggagatgaggattggattgtgga 7354 Query: 263 tccccgggatgaccaccggcttcgtcaccggcnacccggccgacgtcgagcacatccggc 322 ||||||||||| | |||| ||||||||||| |||||||||||||||||||||||| || Sbjct: 7353 tccccgggatgcggagcggcatcgtcaccggcaacccggccgacgtcgagcacatcctgc 7294 Query: 323 gcaccaacttcgcccactaccccnagggcgagcgcgccatctccatgctggtggacttcc 382 ||||||||||||| |||| ||| ||||| ||| |||||| |||||| | ||| |||| Sbjct: 7293 gcaccaacttcgcaaactatcccaagggccagcacgccattggcatgctcgaggatttcc 7234 Query: 383 tcggccacggcctcttcaactccaacggggagcagtggctgtggcagcgca 433 ||||||| ||||||||||||||| |||| ||||||||||| |||||||||| Sbjct: 7233 tcggccatggcctcttcaactccgacggcgagcagtggctctggcagcgca 7183
>ref|NM_197264.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450-dependent fatty acid hydroxylase (OSJNBb0015K05.16), mRNA Length = 723 Score = 115 bits (58), Expect = 1e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| ||||||||||||||||| ||| ||| Sbjct: 89 actaccccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatct 148 Query: 398 tcaactccaacggggagcagtggctgtggcagc 430 |||||||| |||| ||||||||||||||||||| Sbjct: 149 tcaactccgacggcgagcagtggctgtggcagc 181
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 115 bits (58), Expect = 1e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| ||||||||||||||||| ||| ||| Sbjct: 103814 actaccccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatct 103873 Query: 398 tcaactccaacggggagcagtggctgtggcagc 430 |||||||| |||| ||||||||||||||||||| Sbjct: 103874 tcaactccgacggcgagcagtggctgtggcagc 103906
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 115 bits (58), Expect = 1e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| ||||||||||||||||| ||| ||| Sbjct: 18891227 actaccccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatct 18891168 Query: 398 tcaactccaacggggagcagtggctgtggcagc 430 |||||||| |||| ||||||||||||||||||| Sbjct: 18891167 tcaactccgacggcgagcagtggctgtggcagc 18891135 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 298 ccggccgacgtcgagcacatccggcgcaccaacttc 333 ||||||| |||||||||||||| || ||||||||| Sbjct: 19911035 ccggccgtcgtcgagcacatcctccggaccaacttc 19911000
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 115 bits (58), Expect = 1e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| ||||||||||||||||| ||| ||| Sbjct: 18902481 actaccccaagggcgagctcgccgtgtccatgctcgtggacttcctcggccatggcatct 18902422 Query: 398 tcaactccaacggggagcagtggctgtggcagc 430 |||||||| |||| ||||||||||||||||||| Sbjct: 18902421 tcaactccgacggcgagcagtggctgtggcagc 18902389 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 298 ccggccgacgtcgagcacatccggcgcaccaacttc 333 ||||||| |||||||||||||| || ||||||||| Sbjct: 19922311 ccggccgtcgtcgagcacatcctccggaccaacttc 19922276
>ref|NM_190966.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 101 bits (51), Expect = 2e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| || |||||||||||||| ||| ||| Sbjct: 305 actaccccaagggcgagctcgccgtgtccatgctcgtcgacttcctcggccatggcatct 364 Query: 398 tcaactccaacggggagcagtggctgtggcagcg 431 |||||||| |||| |||||||||| ||||||||| Sbjct: 365 tcaactccgacggcgagcagtggcagtggcagcg 398
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 101 bits (51), Expect = 2e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| || |||||||||||||| ||| ||| Sbjct: 34078319 actaccccaagggcgagctcgccgtgtccatgctcgtcgacttcctcggccatggcatct 34078378 Query: 398 tcaactccaacggggagcagtggctgtggcagcg 431 |||||||| |||| |||||||||| ||||||||| Sbjct: 34078379 tcaactccgacggcgagcagtggcagtggcagcg 34078412 Score = 101 bits (51), Expect = 2e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||| | ||||||||||||||||| ||| ||| Sbjct: 34068393 actaccccaagggcgagctcgccgtgtccatggtcgtggacttcctcggccatggcatct 34068452 Query: 398 tcaactccaacggggagcagtggctgtggcagcg 431 |||||||| |||| |||||||||| ||||||||| Sbjct: 34068453 tcaactccgacggcgagcagtggcagtggcagcg 34068486 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 ||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 34125443 ggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcg 34125499 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 |||||| || ||||||||| ||||||||||| |||| |||||||||||||||||||| Sbjct: 34083148 ggacttgcttggccacggcatcttcaactccgacggcgagcagtggctgtggcagcg 34083204 Score = 69.9 bits (35), Expect = 7e-09 Identities = 117/145 (80%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacatccggcgcaccaacttcgcccactaccccn 346 |||||| | |||||||| ||||||||||||| | || ||||| | | |||||||| Sbjct: 34088129 tcaccgccaacccggccaacgtcgagcacattctcaagactaactttgacaactacccca 34088188 Query: 347 agggcgagcgcgccatctccatgctggtggacttcctcggccacggcctcttcaactcca 406 ||||| ||| | || | |||||||| | |||||| || ||||||||| ||||||| ||| Sbjct: 34088189 agggcaagctcaccgtgtccatgctcgaggactttcttggccacggcatcttcaattccg 34088248 Query: 407 acggggagcagtggctgtggcagcg 431 |||| ||||||||||| |||||||| Sbjct: 34088249 acggcgagcagtggctatggcagcg 34088273 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 catctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtg 419 |||| ||||||| | ||||||||| |||| |||| ||||||||||| |||| ||| |||| Sbjct: 34093028 catcaccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtg 34093087 Query: 420 gctgtggca 428 ||||||||| Sbjct: 34093088 gctgtggca 34093096 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 190 aaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccgacctc 246 |||||| ||||||||||||| ||| ||||||| ||| ||| |||| ||||||||||| Sbjct: 41890473 aaccgccaccgcttcctcgactgggccaccgacctcctcgccgcc-gccccgacctc 41890418 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 380 tcctcggccacggcctcttcaactccaacggggagcagtggctg 423 |||||||||| ||| ||||||||||| |||| ||| ||||||| Sbjct: 36833832 tcctcggccagggcatcttcaactccgacggcgagacgtggctg 36833875 Score = 40.1 bits (20), Expect = 5.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacat 317 |||||| | |||||||| ||||||||||||| Sbjct: 34108610 tcaccgccaacccggccaacgtcgagcacat 34108640 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 7070715 cccgctgctcggccacctcc 7070734
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 101 bits (51), Expect = 2e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||||| || |||||||||||||| ||| ||| Sbjct: 74797 actaccccaagggcgagctcgccgtgtccatgctcgtcgacttcctcggccatggcatct 74856 Query: 398 tcaactccaacggggagcagtggctgtggcagcg 431 |||||||| |||| |||||||||| ||||||||| Sbjct: 74857 tcaactccgacggcgagcagtggcagtggcagcg 74890 Score = 101 bits (51), Expect = 2e-18 Identities = 83/94 (88%) Strand = Plus / Plus Query: 338 actaccccnagggcgagcgcgccatctccatgctggtggacttcctcggccacggcctct 397 |||||||| ||||||||| |||| | |||||| | ||||||||||||||||| ||| ||| Sbjct: 64871 actaccccaagggcgagctcgccgtgtccatggtcgtggacttcctcggccatggcatct 64930 Query: 398 tcaactccaacggggagcagtggctgtggcagcg 431 |||||||| |||| |||||||||| ||||||||| Sbjct: 64931 tcaactccgacggcgagcagtggcagtggcagcg 64964 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 ||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 121921 ggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcg 121977 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 |||||| || ||||||||| ||||||||||| |||| |||||||||||||||||||| Sbjct: 79626 ggacttgcttggccacggcatcttcaactccgacggcgagcagtggctgtggcagcg 79682 Score = 69.9 bits (35), Expect = 7e-09 Identities = 117/145 (80%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacatccggcgcaccaacttcgcccactaccccn 346 |||||| | |||||||| ||||||||||||| | || ||||| | | |||||||| Sbjct: 84607 tcaccgccaacccggccaacgtcgagcacattctcaagactaactttgacaactacccca 84666 Query: 347 agggcgagcgcgccatctccatgctggtggacttcctcggccacggcctcttcaactcca 406 ||||| ||| | || | |||||||| | |||||| || ||||||||| ||||||| ||| Sbjct: 84667 agggcaagctcaccgtgtccatgctcgaggactttcttggccacggcatcttcaattccg 84726 Query: 407 acggggagcagtggctgtggcagcg 431 |||| ||||||||||| |||||||| Sbjct: 84727 acggcgagcagtggctatggcagcg 84751 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 catctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtg 419 |||| ||||||| | ||||||||| |||| |||| ||||||||||| |||| ||| |||| Sbjct: 89506 catcaccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtg 89565 Query: 420 gctgtggca 428 ||||||||| Sbjct: 89566 gctgtggca 89574 Score = 40.1 bits (20), Expect = 5.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacat 317 |||||| | |||||||| ||||||||||||| Sbjct: 105088 tcaccgccaacccggccaacgtcgagcacat 105118
>dbj|AK102714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105A13, full insert sequence Length = 1564 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 ||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 301 ggacttcctcggccacggcatcttcaactccgacggcgaccagtggctgtggcagcg 357
>ref|NM_190967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggagcagtggctgtggcagcg 431 |||||| || ||||||||| ||||||||||| |||| |||||||||||||||||||| Sbjct: 348 ggacttgcttggccacggcatcttcaactccgacggcgagcagtggctgtggcagcg 404
>ref|NM_190969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 69.9 bits (35), Expect = 7e-09 Identities = 117/145 (80%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacatccggcgcaccaacttcgcccactaccccn 346 |||||| | |||||||| ||||||||||||| | || ||||| | | |||||||| Sbjct: 263 tcaccgccaacccggccaacgtcgagcacattctcaagactaactttgacaactacccca 322 Query: 347 agggcgagcgcgccatctccatgctggtggacttcctcggccacggcctcttcaactcca 406 ||||| ||| | || | |||||||| | |||||| || ||||||||| ||||||| ||| Sbjct: 323 agggcaagctcaccgtgtccatgctcgaggactttcttggccacggcatcttcaattccg 382 Query: 407 acggggagcagtggctgtggcagcg 431 |||| ||||||||||| |||||||| Sbjct: 383 acggcgagcagtggctatggcagcg 407
>ref|NM_190970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1548 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 360 catctccatgctggtggacttcctcggccacggcctcttcaactccaacggggagcagtg 419 |||| ||||||| | ||||||||| |||| |||| ||||||||||| |||| ||| |||| Sbjct: 327 catcaccatgctcgaggacttccttggccgcggcatcttcaactccgacggcgagaagtg 386 Query: 420 gctgtggca 428 ||||||||| Sbjct: 387 gctgtggca 395
>ref|XM_463748.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1635 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 190 aaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccgacctc 246 |||||| ||||||||||||| ||| ||||||| ||| ||| |||| ||||||||||| Sbjct: 160 aaccgccaccgcttcctcgactgggccaccgacctcctcgccgcc-gccccgacctc 215
>dbj|AP003735.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147A04 Length = 150053 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 190 aaccgcgaccgcttcctcgagtggtccaccgagctcatcgtcgccngccccgacctc 246 |||||| ||||||||||||| ||| ||||||| ||| ||| |||| ||||||||||| Sbjct: 133849 aaccgccaccgcttcctcgactgggccaccgacctcctcgccgcc-gccccgacctc 133794
>ref|XM_473482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 336 ggacctcctcggcgacggcatcttcaactccgacggggag 375
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Minus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 43506 ggacctcctcggcgacggcatcttcaactccgacggggag 43467
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Minus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 28036280 ggacctcctcggcgacggcatcttcaactccgacggggag 28036241 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| |||| ||||||||||| |||||||| Sbjct: 22384964 ggacctcctcggcaacgggatcttcaactccgacggggag 22385003
>dbj|AK106001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H12, full insert sequence Length = 2095 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 634 ggacctcctcggcgacggcatcttcaactccgacggggag 673
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence Length = 225868 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 cccctcttcttcttcttccctg 60 |||||||||||||||||||||| Sbjct: 148936 cccctcttcttcttcttccctg 148915
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 39 cccctcttcttcttcttccctg 60 |||||||||||||||||||||| Sbjct: 16011 cccctcttcttcttcttccctg 16032
>gb|U23448.3| Caenorhabditis elegans cosmid C04A2, complete sequence Length = 25750 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 aggcacccgctgctcggccacc 172 |||||||||||||||||||||| Sbjct: 6024 aggcacccgctgctcggccacc 6045
>gb|DQ394571.1| Glycine max cytochrome P450 monooxygenase CYP94A (CYP94A) mRNA, partial cds Length = 1050 Score = 44.1 bits (22), Expect = 0.37 Identities = 39/45 (86%) Strand = Plus / Plus Query: 175 ccggcgttcctcangaaccgcgaccgcttcctcgagtggtccacc 219 |||| |||||||| |||||| |||| |||||||||||| ||||| Sbjct: 154 ccggagttcctcaaaaaccgccaccgtttcctcgagtggaccacc 198
>gb|AC159428.1| Trypanosoma brucei chromosome 8 clone RPCI93-28A12, complete sequence Length = 154096 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcttcttccc 58 ||||||||||||||||||||| Sbjct: 136454 tcccctcttcttcttcttccc 136474
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcttcttccc 58 ||||||||||||||||||||| Sbjct: 2463548 tcccctcttcttcttcttccc 2463568
>gb|AC091331.14| Mus musculus chromosome 1, clone RP23-293F4, complete sequence Length = 236163 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttcc 57 ||||||||||||||||||||| Sbjct: 122855 ctcccctcttcttcttcttcc 122835
>ref|XM_811767.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053511259.180) partial mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttcc 57 ||||||||||||||||||||| Sbjct: 834 ctcccctcttcttcttcttcc 854
>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland Research Institute) complete sequence Length = 226532 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttcc 57 ||||||||||||||||||||| Sbjct: 132288 ctcccctcttcttcttcttcc 132308
>dbj|AK125409.1| Homo sapiens cDNA FLJ43420 fis, clone OCBBF2026645 Length = 2745 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 347 agggcgagcgcgccatctccatgctggtg 375 ||||| |||| |||||||||||||||||| Sbjct: 2072 agggccagcgtgccatctccatgctggtg 2100
>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence Length = 189356 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 347 agggcgagcgcgccatctccatgctggtg 375 ||||| |||| |||||||||||||||||| Sbjct: 35032 agggccagcgtgccatctccatgctggtg 35004
>emb|AL772383.4| Mouse DNA sequence from clone RP23-22H5 on chromosome 4, complete sequence Length = 149147 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttcc 57 ||||||||||||||||||||| Sbjct: 99711 ctcccctcttcttcttcttcc 99691
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 86220 ctcccctcttcttcttcttc 86201
>ref|NM_126029.2| Arabidopsis thaliana ATP binding / microtubule motor AT5G66310 mRNA, complete cds Length = 3740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 409 ctcccctcttcttcttcttc 428
>ref|NM_188581.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1656 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 177 cccgctgctcggccacctcc 196
>ref|XM_475110.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 147 cccgctgctcggccacctcc 166
>ref|NM_187650.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 862 cctcttcttcttcttccctg 843
>gb|DQ213298.1| Taeniopygia guttata clone 0061P0022F10 epsin 2-like mRNA, complete sequence Length = 1129 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ctgctcggccacctcccggc 179 |||||||||||||||||||| Sbjct: 29 ctgctcggccacctcccggc 10
>ref|NM_197441.1| Oryza sativa (japonica cultivar-group) cytochrome P450-like protein (OSJNBb0005J14.26), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 298 ccggccgacgtcgagcacatccggcgcaccaacttc 333 ||||||| |||||||||||||| || ||||||||| Sbjct: 277 ccggccgtcgtcgagcacatcctccggaccaacttc 312
>ref|NM_190973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 40.1 bits (20), Expect = 5.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacat 317 |||||| | |||||||| ||||||||||||| Sbjct: 251 tcaccgccaacccggccaacgtcgagcacat 281
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 2468 cccgctgctcggccacctcc 2487
>gb|AF100305.1| Caenorhabditis elegans cosmid W04B5, complete sequence Length = 30305 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ttcttcttcttccctgctac 64 |||||||||||||||||||| Sbjct: 22125 ttcttcttcttccctgctac 22106
>gb|BC082237.1| Homo sapiens cDNA clone IMAGE:4861280 Length = 2335 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 773 cctcttcttcttcttccctg 754
>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence Length = 188948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 5030 ctcccctcttcttcttcttc 5049
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 51700 cccgctgctcggccacctcc 51719
>ref|NM_031304.2| Homo sapiens HEAT-like (PBS lyase) repeat containing 1 (HLRC1), mRNA Length = 1772 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cgcgccatctccatgctggtggac 378 ||||||||| |||||||||||||| Sbjct: 368 cgcgccatccccatgctggtggac 391
>gb|AY813601.1| Schistosoma japonicum SJCHGC05314 protein mRNA, complete cds Length = 995 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 578 ctcccctcttcttcttcttc 559
>emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chromosome 13, complete sequence Length = 204148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 147035 cctcttcttcttcttccctg 147016
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 20444 ctcccctcttcttcttcttc 20463
>ref|XM_804814.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510623.20) partial mRNA Length = 1092 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 1032 ctcccctcttcttcttcttc 1051
>gb|AC007950.7| Homo sapiens chromosome 15, clone RP11-44M14, complete sequence Length = 170979 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcttcttcc 57 |||||||||||||||||||| Sbjct: 112985 tcccctcttcttcttcttcc 113004
>gb|AC124686.3| Mus musculus BAC clone RP24-422F20 from chromosome 10, complete sequence Length = 194018 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 153173 ctcccctcttcttcttcttc 153192
>gb|AC121910.3| Mus musculus BAC clone RP24-180H14 from chromosome 13, complete sequence Length = 143473 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 3770 cctcttcttcttcttccctg 3751
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 40609 ctcccctcttcttcttcttc 40628
>ref|NM_010748.1| Mus musculus lysosomal trafficking regulator (Lyst), mRNA Length = 11817 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 287 cctcttcttcttcttccctg 268
>gb|AC145110.2| Homo sapiens chromosome 8, clone XXfos-80720H9, complete sequence Length = 37688 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 15403 cctcttcttcttcttccctg 15384
>emb|BX294157.10| Zebrafish DNA sequence from clone CH211-213O10 in linkage group 20, complete sequence Length = 157230 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tcttcttcttcttccctgct 62 |||||||||||||||||||| Sbjct: 6937 tcttcttcttcttccctgct 6918
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tgctcggccacctcccggcg 180 |||||||||||||||||||| Sbjct: 262325 tgctcggccacctcccggcg 262306
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 114296 ctcccctcttcttcttcttc 114277
>gb|BC002817.2| Homo sapiens HEAT-like (PBS lyase) repeat containing 1, mRNA (cDNA clone MGC:4293 IMAGE:3635058), complete cds Length = 1772 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cgcgccatctccatgctggtggac 378 ||||||||| |||||||||||||| Sbjct: 368 cgcgccatccccatgctggtggac 391
>gb|BC009863.2| Homo sapiens HEAT-like (PBS lyase) repeat containing 1, mRNA (cDNA clone MGC:16388 IMAGE:3938535), complete cds Length = 1650 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 cgcgccatctccatgctggtggac 378 ||||||||| |||||||||||||| Sbjct: 257 cgcgccatccccatgctggtggac 280
>gb|AC093052.2| Homo sapiens chromosome 19 clone LLNLF-143G5, complete sequence Length = 5160 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 cgcgccatctccatgctggtggac 378 ||||||||| |||||||||||||| Sbjct: 4035 cgcgccatccccatgctggtggac 4012
>dbj|AK165585.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430028P21 product:lysosomal trafficking regulator, full insert sequence Length = 2707 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 302 cctcttcttcttcttccctg 283
>ref|XM_693711.1| PREDICTED: Danio rerio similar to SEC3-like 1 (LOC573797), mRNA Length = 3524 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tcttcttcttcttccctgct 62 |||||||||||||||||||| Sbjct: 273 tcttcttcttcttccctgct 254
>gb|AC051638.24| Mus musculus chromosome 6, clone RP23-177J17, complete sequence Length = 231841 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 cccctcttcttcttcttccctgct 62 ||||||||||| |||||||||||| Sbjct: 129983 cccctcttctttttcttccctgct 130006
>gb|L77884.1|MUSLYST Mus musculus LYST (Lyst) mRNA, complete cds Length = 5893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 287 cctcttcttcttcttccctg 268
>gb|AC124554.5| Mus musculus BAC clone RP23-245F10 from chromosome 3, complete sequence Length = 191481 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccctcttcttcttcttccct 59 |||||||||||||||||||| Sbjct: 59365 ccctcttcttcttcttccct 59384
>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 113205 ctcccctcttcttcttcttc 113224
>gb|AF372930.1|AF372930 Arabidopsis thaliana AT5g66310/K1L20_9 mRNA, partial cds Length = 1723 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 409 ctcccctcttcttcttcttc 428
>gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224257 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 185804 ctcccctcttcttcttcttc 185823
>dbj|AK089635.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830005O18 product:lysosomal trafficking regulator, full insert sequence Length = 3933 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 48 cctcttcttcttcttccctg 29
>gb|AC158666.3| Mus musculus 6 BAC RP23-11A20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188927 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 12046 ctcccctcttcttcttcttc 12027
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tcctcggccacggcctcttc 399 |||||||||||||||||||| Sbjct: 2385893 tcctcggccacggcctcttc 2385912
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 28965210 ctcccctcttcttcttcttc 28965191
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 17058333 cccgctgctcggccacctcc 17058352
>gb|AC016720.9| Homo sapiens BAC clone RP11-326G23 from 2, complete sequence Length = 154318 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcttcttcc 57 |||||||||||||||||||| Sbjct: 120637 tcccctcttcttcttcttcc 120656
>gb|BC015784.1| Homo sapiens, clone IMAGE:4861097, mRNA Length = 2804 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 1243 cctcttcttcttcttccctg 1224
>gb|BC047326.1| Homo sapiens, clone IMAGE:5528960, mRNA Length = 2803 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 1247 cctcttcttcttcttccctg 1228
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 298 ccggccgacgtcgagcacatccggcgcaccaacttc 333 ||||||| |||||||||||||| || ||||||||| Sbjct: 75008 ccggccgtcgtcgagcacatcctccggaccaacttc 75043
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 ctcggccacctcccggcgttcctc 186 ||||||||||| |||||||||||| Sbjct: 1798388 ctcggccacctgccggcgttcctc 1798411
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 252 gggcttctggatccccgggatgaccacc 279 ||||||||||||| ||||||||| |||| Sbjct: 28232 gggcttctggatcaccgggatgatcacc 28205
>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096A10 Length = 150976 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 380 tcctcggccacggcctcttcaactccaacggggagcagtggctg 423 |||||||||| ||| ||||||||||| |||| ||| ||||||| Sbjct: 49410 tcctcggccagggcatcttcaactccgacggcgagacgtggctg 49453
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccgctgctcggccacctcc 175 |||||||||||||||||||| Sbjct: 58295 cccgctgctcggccacctcc 58314
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 115254 ctcccctcttcttcttcttc 115235
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tcctcggccacggcctcttc 399 |||||||||||||||||||| Sbjct: 88901 tcctcggccacggcctcttc 88920
>dbj|AB022211.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1L20 Length = 47665 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 27321 ctcccctcttcttcttcttc 27302
>dbj|AK109676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C01, full insert sequence Length = 2038 Score = 40.1 bits (20), Expect = 5.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 380 tcctcggccacggcctcttcaactccaacggggagcagtggctg 423 |||||||||| ||| ||||||||||| |||| ||| ||||||| Sbjct: 497 tcctcggccagggcatcttcaactccgacggcgagacgtggctg 540
>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence Length = 198847 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 109227 cctcttcttcttcttccctg 109246
>gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162561 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 85422 ctcccctcttcttcttcttc 85441
>dbj|AK070931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B22, full insert sequence Length = 1757 Score = 40.1 bits (20), Expect = 5.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 287 tcaccggcnacccggccgacgtcgagcacat 317 |||||| | |||||||| ||||||||||||| Sbjct: 352 tcaccgccaacccggccaacgtcgagcacat 382
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence Length = 233833 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 120215 ctcccctcttcttcttcttc 120196
>gb|AY554283.1| Zea mays clone g24 putative PTI1-like kinase (Pti1) gene, complete cds Length = 6059 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tcctcgagtggtccaccgag 222 |||||||||||||||||||| Sbjct: 4630 tcctcgagtggtccaccgag 4649
>emb|CT485616.11| Mouse DNA sequence from clone RP23-14H16 on chromosome 17, complete sequence Length = 163243 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 84934 ctcccctcttcttcttcttc 84953
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 85321 cctcttcttcttcttccctg 85302
>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence Length = 172721 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 62758 ctcccctcttcttcttcttc 62777
>emb|AL808112.34| Mouse DNA sequence from clone RP23-57N22 on chromosome 4, complete sequence Length = 236158 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 196520 ctcccctcttcttcttcttc 196539
>gb|AY948340.1| Crocus sativus APETALA3-like MADS box protein mRNA, complete cds Length = 896 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 5 ctcccctcttcttcttcttc 24
>gb|U70015.1|MMU70015 Mus musculus lysosomal trafficking regulator (Lyst) mRNA, alternatively spliced, complete cds Length = 11817 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcttcttccctg 60 |||||||||||||||||||| Sbjct: 287 cctcttcttcttcttccctg 268
>gb|U26427.1|ABU26427 Azospirillum brasilense ATP-binding protein, nifU, nifS, and nifV genes, complete cds; and unknown gene Length = 5115 Score = 40.1 bits (20), Expect = 5.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 281 gcttcgtcaccggcnacccggcc 303 |||||||||||||| |||||||| Sbjct: 2576 gcttcgtcaccggcaacccggcc 2598
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 375 ggacttcctcggccacggcctcttcaactccaacggggag 414 |||| |||||||| |||| ||||||||||| |||||||| Sbjct: 135868 ggacctcctcggcaacgggatcttcaactccgacggggag 135907
>gb|BC054625.1| Danio rerio exocyst complex component 1, mRNA (cDNA clone MGC:64145 IMAGE:6796979), complete cds Length = 3252 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tcttcttcttcttccctgct 62 |||||||||||||||||||| Sbjct: 260 tcttcttcttcttccctgct 241
>emb|AL662932.10| Mouse DNA sequence from clone RP23-15B7 on chromosome X, complete sequence Length = 218740 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcttcttc 56 |||||||||||||||||||| Sbjct: 8650 ctcccctcttcttcttcttc 8669
>ref|NM_199597.1| Danio rerio exocyst complex component 1 (exoc1), mRNA Length = 3252 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 tcttcttcttcttccctgct 62 |||||||||||||||||||| Sbjct: 260 tcttcttcttcttccctgct 241
>gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, complete sequence Length = 177432 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcttcttcc 57 |||||||||||||||||||| Sbjct: 24875 tcccctcttcttcttcttcc 24894 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,675,772 Number of Sequences: 3902068 Number of extensions: 3675772 Number of successful extensions: 640259 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 636875 Number of HSP's gapped (non-prelim): 3380 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
