>PPCK_TREPA (O83159) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 618

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS LA D  W  L E + + +   P  +T+Y   A     G+T  A  +  +  W+ E
Sbjct: 227 RIASVLARDEGW--LAEHMLILKITNPAGKTKYIGAAFPSACGKTNLAMMIPTLPGWKVE 284

Query: 126 TEGDE 112
           T GD+
Sbjct: 285 TVGDD 289

>HXDAA_BRARE (Q90469) Homeobox protein Hox-D10a (Hox-D10) (Hox-C10)|
          Length = 343

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = -3

Query: 426 ASPATTGDSVLSTLAQRNCGSLATTAAMSAPEKPRPARKART 301
           +SPA + +  +STL ++NC   +T A++S+PE P    KA +
Sbjct: 205 SSPAQSPEPKVSTLEEKNC---STEASVSSPELPHREGKAES 243

>PPCK_NOCFA (Q5YNB0) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 610

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  Y + A     G+T  A     +  WR E
Sbjct: 238 RIASAMAHDEGW--LAEHMLILKLISPENKAYYIAAAFPSACGKTNLAMIQPTVPGWRAE 295

Query: 126 TEGDE 112
           T GD+
Sbjct: 296 TLGDD 300

>PPCK_MYCPA (Q73TS2) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 609

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  Y + A     G+T  A     +  WR E
Sbjct: 234 RIASAMAHDEGW--LAEHMLILKLISPENKAYYFAAAFPSACGKTNLAMLQPTIPGWRAE 291

Query: 126 TEGDE 112
           T GD+
Sbjct: 292 TLGDD 296

>PPCK_MYCLE (O06084) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 609

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  Y + A     G+T  A     +  WR E
Sbjct: 234 RIASAMAHDEGW--LAEHMLILKLISPENKAYYFAAAFPSACGKTNLAMLQPTIPGWRAE 291

Query: 126 TEGDE 112
           T GD+
Sbjct: 292 TLGDD 296

>PPCK_MYCTU (P65686) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 606

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  Y + A     G+T  A     +  WR E
Sbjct: 234 RIASAMAHDEGW--LAEHMLILKLISPENKAYYFAAAFPSACGKTNLAMLQPTIPGWRAE 291

Query: 126 TEGDE 112
           T GD+
Sbjct: 292 TLGDD 296

>PPCK_MYCBO (P65687) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 606

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  Y + A     G+T  A     +  WR E
Sbjct: 234 RIASAMAHDEGW--LAEHMLILKLISPENKAYYFAAAFPSACGKTNLAMLQPTIPGWRAE 291

Query: 126 TEGDE 112
           T GD+
Sbjct: 292 TLGDD 296

>PPCK_MYCSM (Q9AGJ6) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 605

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + + + P+ +  + + A     G+T  A     +  WR E
Sbjct: 234 RIASAMAHDEGW--LAEHMLILKLISPENKAYFIAAAFPSACGKTNLAMLQPTIEGWRAE 291

Query: 126 TEGDE 112
           T GD+
Sbjct: 292 TVGDD 296

>RAVR2_MOUSE (Q7TPD6) Protein raver-2|
          Length = 673

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 224 CGLTRRQTVKASPRISHLKSPANPDAVLAF 313
           CG   +  +  +P +SHL SP+ P A+L F
Sbjct: 351 CGRAMKPVLGVAPSLSHLLSPSLPSAILHF 380

>RFCL_METMA (Q8Q084) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 610

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
 Frame = -3

Query: 420 PATTGDSVLSTLAQRNCGSLATTAAMSAPEK-------PRPARKARTASGLAGDLRWEIL 262
           P T GD V +  A ++    A       PEK       P    K  +A  LAGD+ WE++
Sbjct: 18  PRTLGDVVGNRKAVQDLRKWAEEWQSGIPEKRAVILYGPAGIGKTSSAHALAGDMEWEVI 77

>PPCK_STRAW (Q82I71) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 607

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/65 (32%), Positives = 31/65 (47%)
 Frame = -3

Query: 306 RTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGE 127
           R AS +A D  W  L E + + +   PQ E++Y + A     G+T  A     +  W  E
Sbjct: 236 RIASVMARDEGW--LAEHMLILKLTPPQGESKYVAAAFPSACGKTNLAMLEPTVGGWTVE 293

Query: 126 TEGDE 112
           T GD+
Sbjct: 294 TIGDD 298

>ISPD_CLOTE (Q890M1) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT)
          Length = 246

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +2

Query: 206 EYLVSTCGLTRRQTVKASPRISHLKSPANPDAVLA 310
           +Y   TCG+T + T+K   +++ +K   N D +++
Sbjct: 136 KYGACTCGVTPKDTIKVKDKLNFIKESLNRDFLIS 170

>LPXD_NEIMA (Q9JX29) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 347

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
 Frame = +2

Query: 254 ASPRISHLKSPANPD------------AVLAFLAGLGFSGADIAAVVARDPQFLCASVER 397
           A  +  H+   ANP              +++  A  GF G ++  +VA DP    A V R
Sbjct: 33  ADAQAEHISFLANPKYKAEVHDSSAGAVIVSAKAADGFEGRNL--IVADDPYLYFAKVAR 90

Query: 398 TLSPVVAGLAGL 433
             SPVV    G+
Sbjct: 91  LFSPVVKARGGI 102

>LPXD_NEIMB (P95377) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 348

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
 Frame = +2

Query: 254 ASPRISHLKSPANPD------------AVLAFLAGLGFSGADIAAVVARDPQFLCASVER 397
           A  +  H+   ANP              +++  A  GF G ++  +VA DP    A V R
Sbjct: 33  ADAQAEHISFLANPKYKAEVHDSSAGAVIVSAKAADGFEGRNL--IVADDPYLYFAKVAR 90

Query: 398 TLSPVVAGLAGL 433
             SPVV    G+
Sbjct: 91  LFSPVVKARGGI 102

>OC90_MOUSE (Q9Z0L3) Otoconin 90 precursor (Oc90) (Otoconin-95) (Oc95)|
          Length = 485

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -3

Query: 369 GSLATTAAMSAPEKPRPARKARTASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKL 190
           G  AT      PEKP    +   +  +AG++R + L   L+  + V+   +T+ S T   
Sbjct: 199 GKAATLLPRGIPEKPTDTSQIALSGEVAGEVRADTL-TTLSRTKSVQDLQDTQASRTTSS 257

Query: 189 LGSGE 175
            GS E
Sbjct: 258 PGSAE 262

>ARLY_RANCA (P51464) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 467

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = -3

Query: 288 AGDLRWE--ILGEALTVCRRVRPQVETRYSSTAKLLGSGETAGADTVVEMRRWRGETEGD 115
           A  +RW   IL  A+ +CR      E R       LGSG  AG    V+    R E E D
Sbjct: 164 AQPIRWSHWILSHAVALCRDAERLGELRKRINVLPLGSGAIAGNPLGVDRELLRKELEFD 223

>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = -3

Query: 303 TASGLAGDLRWEILGEALTVCRRVRPQVETRYSSTAKLLGSGETA--GAD----TVVEMR 142
           TA+G+ GD   EIL  AL   R     +ET      + L  G T   G D    TV E  
Sbjct: 258 TAAGVLGDE--EILRMALPALRGDYRAIETYTCPPDRRLACGLTVLTGEDDPLTTVEEAE 315

Query: 141 RWRGETEG 118
           RWR  T G
Sbjct: 316 RWRDHTTG 323

>TRBP2_ARATH (P25269) Tryptophan synthase beta chain 2, chloroplast precursor|
           (EC 4.2.1.20)
          Length = 475

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 218 STCGLTRRQTVKASPRISHLKSPAN--PDAVLAFLAGLGFSGADIAAVVARDPQFLCASV 391
           ST    R  +V AS  ++HL+SP+       L        S   ++  +A+DP  + A  
Sbjct: 5   STAATFRPSSVSASSELTHLRSPSKLPKFTPLPSARSRSSSSFSVSCTIAKDPAVVMADS 64

Query: 392 ER 397
           E+
Sbjct: 65  EK 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,106,111
Number of Sequences: 219361
Number of extensions: 486239
Number of successful extensions: 2166
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)