ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart07b08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaaggcctccccc 262 ||||| ||||||||| ||||||||||||||||| | ||| | ||||||| ||| Sbjct: 10449 gaggactacctcgtcgccacctgcggcctcaccggcgaccaggcgctcaaggcgtccaag 10508 Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 | |||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||| Sbjct: 10509 aagatctcccacctcaggtccgccgccaacccggacgccgtgctcgccgtcctctccggc 10568 Query: 323 ctcggcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgc 382 ||||| |||| |||||||| ||||||| ||||||||| |||||||| |||||||| Sbjct: 10569 gtcggcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcacctcctctgc 10628 Query: 383 gccag 387 ||||| Sbjct: 10629 gccag 10633 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 16156 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 16215 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 16216 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 16275 Query: 387 g 387 | Sbjct: 16276 g 16276 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 2277 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 2218 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 2217 gcctctcccgcgccgacctcgccgccgtggtcgcc 2183 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcac 234 |||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 2351 cttctccgtcgaggagtacctcgtcgccacctgcggcctcac 2310 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 16092 gaggagtacctcgtcgacacctgcggcctcacc 16124
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaaggcctccccc 262 ||||| ||||||||| ||||||||||||||||| | ||| | ||||||| ||| Sbjct: 63265 gaggactacctcgtcgccacctgcggcctcaccggcgaccaggcgctcaaggcgtccaag 63324 Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 | |||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||| Sbjct: 63325 aagatctcccacctcaggtccgccgccaacccggacgccgtgctcgccgtcctctccggc 63384 Query: 323 ctcggcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgc 382 ||||| |||| |||||||| ||||||| ||||||||| |||||||| |||||||| Sbjct: 63385 gtcggcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcacctcctctgc 63444 Query: 383 gccag 387 ||||| Sbjct: 63445 gccag 63449 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 68972 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 69031 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 69032 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 69091 Query: 387 g 387 | Sbjct: 69092 g 69092 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 55093 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 55034 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 55033 gcctctcccgcgccgacctcgccgccgtggtcgcc 54999 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcac 234 |||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 55167 cttctccgtcgaggagtacctcgtcgccacctgcggcctcac 55126 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 68908 gaggagtacctcgtcgacacctgcggcctcacc 68940
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 203 gaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaaggcctccccc 262 ||||| ||||||||| ||||||||||||||||| | ||| | ||||||| ||| Sbjct: 5286950 gaggactacctcgtcgccacctgcggcctcaccggcgaccaggcgctcaaggcgtccaag 5286891 Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 | |||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||| Sbjct: 5286890 aagatctcccacctcaggtccgccgccaacccggacgccgtgctcgccgtcctctccggc 5286831 Query: 323 ctcggcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgc 382 ||||| |||| |||||||| ||||||| ||||||||| |||||||| |||||||| Sbjct: 5286830 gtcggcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcacctcctctgc 5286771 Query: 383 gccag 387 ||||| Sbjct: 5286770 gccag 5286766 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 5281243 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 5281184 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 5281183 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 5281124 Query: 387 g 387 | Sbjct: 5281123 g 5281123 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 5295122 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 5295181 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 5295182 gcctctcccgcgccgacctcgccgccgtggtcgcc 5295216 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcac 234 |||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 5295048 cttctccgtcgaggagtacctcgtcgccacctgcggcctcac 5295089 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 5281307 gaggagtacctcgtcgacacctgcggcctcacc 5281275 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 275 ctcaagtcccccgccaaccccgacgccgtcctcgccttcctc 316 ||||| ||| || |||||||||||||||| |||||| ||||| Sbjct: 7788850 ctcaactcctcctccaaccccgacgccgtgctcgccctcctc 7788891
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 113 bits (57), Expect = 5e-22 Identities = 117/137 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||||| Sbjct: 6464942 tctcccacctcaggtccccctccaaccccgatgccgtcctcgccttcctctccggcctcg 6464883 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| || | ||||||||||| || |||| || ||||||| ||| ||||||||| Sbjct: 6464882 gcctctcccgcccggacatcgccgccgtggtcgtcaacgacccgctcttcatctgcgcca 6464823 Query: 387 gcgtggagaggacgctg 403 | ||||| | ||||||| Sbjct: 6464822 gggtggacaagacgctg 6464806 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 266 atctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctc 325 |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 6491423 atctcccacctcaagtccccgtccaggcccgacgccgtcgtcgccttcctcgccggcctc 6491364 Query: 326 ggcttctctggcgccgacatcgccgcggtcgtcgcc 361 ||| |||| | ||||||||||||||| | ||||||| Sbjct: 6491363 ggcctctccgccgccgacatcgccgccgccgtcgcc 6491328 Score = 109 bits (55), Expect = 8e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 6473187 aggatctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctcgccggc 6473128 Query: 323 ctcggcttctctggcgccgacatcgcc 349 |||||| || | || ||||||||||| Sbjct: 6473127 ctcggcatcccgcgccccgacatcgcc 6473101 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaa 252 ||||||||| || |||||||||||| |||||||||||||||||||| ||| | | ||| Sbjct: 6478676 cttcgccgtcgacgagtacctcgtcgccacctgcggcctcacccgagcccaggcagccaa 6478617 Query: 253 ggcctcccccaggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgcctt 312 ||| || | | ||||| |||||| ||||||| |||| |||||||||||||||||||| Sbjct: 6478616 ggcttcggagaagctctccaacctcaggtccccctccaatcccgacgccgtcctcgcctt 6478557 Query: 313 cctcgccggcctcggcttctc 333 |||| ||| ||||||| |||| Sbjct: 6478556 cctctccgacctcggcctctc 6478536 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||| ||||| ||||||||| Sbjct: 6470121 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccatcctctccggcctcg 6470062 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || || | || ||||||||||||| | ||||||| Sbjct: 6470061 gcctcacgcgccccgacatcgccgccgccgtcgcc 6470027 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct: 6493456 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctctccgacctcg 6493515 Query: 327 gc 328 || Sbjct: 6493516 gc 6493517 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||| ||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||| Sbjct: 6484214 tctcccgcctcaggtccccctccaagcccgacgccgccgtcgccttcctctccggcctcg 6484155 Query: 327 gcttctctggcgccgacatcgccgc 351 || |||| || ||| ||||||||| Sbjct: 6484154 gcctctcgcgctccggcatcgccgc 6484130 Score = 73.8 bits (37), Expect = 4e-10 Identities = 114/137 (83%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccga-cggcagaccgtca 251 ||||||||| ||||| ||||||||| || |||||||||||||||| | | || | | || Sbjct: 6475878 cttcgccgtcgaggactacctcgtcgccggctgcggcctcacccgagccgaag-cagcca 6475820 Query: 252 aggcctcccccaggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgcct 311 |||| || | | |||||||||||||| |||||| |||| |||||||||||| |||||| Sbjct: 6475819 aggcttcggcgaagatctcccacctcagctccccctccaatcccgacgccgtcatcgcct 6475760 Query: 312 tcctcgccggcctcggc 328 ||||| ||| ||||||| Sbjct: 6475759 tcctctccgacctcggc 6475743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacc 235 ||||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 6484288 cttcgccgtcgaggactacctggtcaccacctgcggcctcacc 6484246 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccga 238 |||||||| ||||| ||||||||| || ||||||||||||||||| Sbjct: 6473257 cttcgccgccgaggactacctcgtcgccgcctgcggcctcacccga 6473212 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcaccc 236 ||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 6491496 cttcgccgtcgaggagtacctcgtggccacctgccacctcaccc 6491453 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 126 tctcccctctccaccgcctcatctcc 151 |||||||||||||||||||| ||||| Sbjct: 6484349 tctcccctctccaccgcctcttctcc 6484324 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ccccgacgccgtcctcgccttcctcgccg 320 ||||||||||||| ||||||||| ||||| Sbjct: 10235760 ccccgacgccgtcgtcgccttccccgccg 10235788 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 1488984 ccgacgccgtcctcgtcttcctcg 1488961 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcgacgccgtgctccggct 84 |||||||||||||||||||| Sbjct: 1024314 cgcgacgccgtgctccggct 1024295
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 113 bits (57), Expect = 5e-22 Identities = 117/137 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||||| Sbjct: 131886 tctcccacctcaggtccccctccaaccccgatgccgtcctcgccttcctctccggcctcg 131827 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| || | ||||||||||| || |||| || ||||||| ||| ||||||||| Sbjct: 131826 gcctctcccgcccggacatcgccgccgtggtcgtcaacgacccgctcttcatctgcgcca 131767 Query: 387 gcgtggagaggacgctg 403 | ||||| | ||||||| Sbjct: 131766 gggtggacaagacgctg 131750 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 266 atctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctc 325 |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 158367 atctcccacctcaagtccccgtccaggcccgacgccgtcgtcgccttcctcgccggcctc 158308 Query: 326 ggcttctctggcgccgacatcgccgcggtcgtcgcc 361 ||| |||| | ||||||||||||||| | ||||||| Sbjct: 158307 ggcctctccgccgccgacatcgccgccgccgtcgcc 158272 Score = 109 bits (55), Expect = 8e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 140131 aggatctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctcgccggc 140072 Query: 323 ctcggcttctctggcgccgacatcgcc 349 |||||| || | || ||||||||||| Sbjct: 140071 ctcggcatcccgcgccccgacatcgcc 140045 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaa 252 ||||||||| || |||||||||||| |||||||||||||||||||| ||| | | ||| Sbjct: 145620 cttcgccgtcgacgagtacctcgtcgccacctgcggcctcacccgagcccaggcagccaa 145561 Query: 253 ggcctcccccaggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgcctt 312 ||| || | | ||||| |||||| ||||||| |||| |||||||||||||||||||| Sbjct: 145560 ggcttcggagaagctctccaacctcaggtccccctccaatcccgacgccgtcctcgcctt 145501 Query: 313 cctcgccggcctcggcttctc 333 |||| ||| ||||||| |||| Sbjct: 145500 cctctccgacctcggcctctc 145480 Score = 93.7 bits (47), Expect = 5e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||| ||||| ||||||||| Sbjct: 137065 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccatcctctccggcctcg 137006 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || || | || ||||||||||||| | ||||||| Sbjct: 137005 gcctcacgcgccccgacatcgccgccgccgtcgcc 136971 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct: 160400 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctctccgacctcg 160459 Query: 327 gc 328 || Sbjct: 160460 gc 160461 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||| ||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||| Sbjct: 151158 tctcccgcctcaggtccccctccaagcccgacgccgccgtcgccttcctctccggcctcg 151099 Query: 327 gcttctctggcgccgacatcgccgc 351 || |||| || ||| ||||||||| Sbjct: 151098 gcctctcgcgctccggcatcgccgc 151074 Score = 73.8 bits (37), Expect = 4e-10 Identities = 114/137 (83%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccga-cggcagaccgtca 251 ||||||||| ||||| ||||||||| || |||||||||||||||| | | || | | || Sbjct: 142822 cttcgccgtcgaggactacctcgtcgccggctgcggcctcacccgagccgaag-cagcca 142764 Query: 252 aggcctcccccaggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgcct 311 |||| || | | |||||||||||||| |||||| |||| |||||||||||| |||||| Sbjct: 142763 aggcttcggcgaagatctcccacctcagctccccctccaatcccgacgccgtcatcgcct 142704 Query: 312 tcctcgccggcctcggc 328 ||||| ||| ||||||| Sbjct: 142703 tcctctccgacctcggc 142687 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacc 235 ||||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 151232 cttcgccgtcgaggactacctggtcaccacctgcggcctcacc 151190 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccga 238 |||||||| ||||| ||||||||| || ||||||||||||||||| Sbjct: 140201 cttcgccgccgaggactacctcgtcgccgcctgcggcctcacccga 140156 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcaccc 236 ||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 158440 cttcgccgtcgaggagtacctcgtggccacctgccacctcaccc 158397 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 126 tctcccctctccaccgcctcatctcc 151 |||||||||||||||||||| ||||| Sbjct: 151293 tctcccctctccaccgcctcttctcc 151268
>dbj|AK103852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L16, full insert sequence Length = 1529 Score = 113 bits (57), Expect = 5e-22 Identities = 117/137 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||||||||| |||||||||||||||||| ||||||||| Sbjct: 331 tctcccacctcaggtccccctccaaccccgatgccgtcctcgccttcctctccggcctcg 390 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| || | ||||||||||| || |||| || ||||||| ||| ||||||||| Sbjct: 391 gcctctcccgcccggacatcgccgccgtggtcgtcaacgacccgctcttcatctgcgcca 450 Query: 387 gcgtggagaggacgctg 403 | ||||| | ||||||| Sbjct: 451 gggtggacaagacgctg 467
>dbj|AK064170.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-A03, full insert sequence Length = 1769 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaaggcctccccc 262 ||||| ||||||||| ||||||||||||||||| | ||| | ||||||| ||| Sbjct: 188 gaggactacctcgtcgccacctgcggcctcaccggcgaccaggcgctcaaggcgtccaag 247 Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 | |||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||| Sbjct: 248 aagatctcccacctcaggtccgccgccaacccggacgccgtgctcgccgtcctctccggc 307 Query: 323 ctcggcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgc 382 ||||| |||| |||||||| ||||||| ||||||||| |||||||| |||||||| Sbjct: 308 gtcggcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcacctcctctgc 367 Query: 383 gccag 387 ||||| Sbjct: 368 gccag 372
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 113 bits (57), Expect = 5e-22 Identities = 153/185 (82%) Strand = Plus / Minus Query: 203 gaggagtacctcgtctccacctgcggcctcacccgacggcagaccgtcaaggcctccccc 262 ||||| ||||||||| ||||||||||||||||| | ||| | ||||||| ||| Sbjct: 5353427 gaggactacctcgtcgccacctgcggcctcaccggcgaccaggcgctcaaggcgtccaag 5353368 Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 | |||||||||||||| |||| |||||||||| |||||||| |||||| ||||| ||||| Sbjct: 5353367 aagatctcccacctcaggtccgccgccaacccggacgccgtgctcgccgtcctctccggc 5353308 Query: 323 ctcggcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgc 382 ||||| |||| |||||||| ||||||| ||||||||| |||||||| |||||||| Sbjct: 5353307 gtcggcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcacctcctctgc 5353248 Query: 383 gccag 387 ||||| Sbjct: 5353247 gccag 5353243 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 5347720 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 5347661 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 5347660 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 5347601 Query: 387 g 387 | Sbjct: 5347600 g 5347600 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 5361599 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 5361658 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 5361659 gcctctcccgcgccgacctcgccgccgtggtcgcc 5361693 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcac 234 |||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 5361525 cttctccgtcgaggagtacctcgtcgccacctgcggcctcac 5361566 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 5347784 gaggagtacctcgtcgacacctgcggcctcacc 5347752 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 275 ctcaagtcccccgccaaccccgacgccgtcctcgccttcctc 316 ||||| ||| || |||||||||||||||| |||||| ||||| Sbjct: 7858937 ctcaactcctcctccaaccccgacgccgtgctcgccctcctc 7858978
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Minus Query: 266 atctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctc 325 |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 7799 atctcccacctcaagtccccgtccaggcccgacgccgtcgtcgccttcctcgccggcctc 7740 Query: 326 ggcttctctggcgccgacatcgccgcggtcgtcgcc 361 ||| |||| | ||||||||||||||| | ||||||| Sbjct: 7739 ggcctctccgccgccgacatcgccgccgccgtcgcc 7704 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct: 9832 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctctccgacctcg 9891 Query: 327 gc 328 || Sbjct: 9892 gc 9893 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||| ||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||| Sbjct: 590 tctcccgcctcaggtccccctccaagcccgacgccgccgtcgccttcctctccggcctcg 531 Query: 327 gcttctctggcgccgacatcgccgc 351 || |||| || ||| ||||||||| Sbjct: 530 gcctctcgcgctccggcatcgccgc 506 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacc 235 ||||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 664 cttcgccgtcgaggactacctggtcaccacctgcggcctcacc 622 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Minus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcaccc 236 ||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 7872 cttcgccgtcgaggagtacctcgtggccacctgccacctcaccc 7829 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 126 tctcccctctccaccgcctcatctcc 151 |||||||||||||||||||| ||||| Sbjct: 725 tctcccctctccaccgcctcttctcc 700
>dbj|AK071845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A09, full insert sequence Length = 1698 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 266 atctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctc 325 |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 375 atctcccacctcaagtccccgtccaggcccgacgccgtcgtcgccttcctcgccggcctc 434 Query: 326 ggcttctctggcgccgacatcgccgcggtcgtcgcc 361 ||| |||| | ||||||||||||||| | ||||||| Sbjct: 435 ggcctctccgccgccgacatcgccgccgccgtcgcc 470 Score = 48.1 bits (24), Expect = 0.024 Identities = 39/44 (88%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcaccc 236 ||||||||| |||||||||||||| |||||||| |||||||| Sbjct: 302 cttcgccgtcgaggagtacctcgtggccacctgccacctcaccc 345
>dbj|AK100116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007D12, full insert sequence Length = 1442 Score = 109 bits (55), Expect = 8e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 263 aggatctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggc 322 |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 261 aggatctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctcgccggc 320 Query: 323 ctcggcttctctggcgccgacatcgcc 349 |||||| || | || ||||||||||| Sbjct: 321 ctcggcatcccgcgccccgacatcgcc 347 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacccga 238 |||||||| ||||| ||||||||| || ||||||||||||||||| Sbjct: 191 cttcgccgccgaggactacctcgtcgccgcctgcggcctcacccga 236
>dbj|AK100873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126C15, full insert sequence Length = 1535 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 312 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 371 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 372 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 431 Query: 387 g 387 | Sbjct: 432 g 432 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 248 gaggagtacctcgtcgacacctgcggcctcacc 280
>dbj|AK069688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034A08, full insert sequence Length = 1493 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 287 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 346 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgccagggacccgcagttcctctgcgcca 386 || |||| |||||||| ||||||| ||||||||| ||||||||| | |||||||||| Sbjct: 347 gcctctcccgcgccgacctcgccgccgtcgtcgcctccgacccgcagctgctctgcgcca 406 Query: 387 g 387 | Sbjct: 407 g 407 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 gaggagtacctcgtctccacctgcggcctcacc 235 ||||||||||||||| |||||||||||||||| Sbjct: 223 gaggagtacctcgtcgacacctgcggcctcacc 255
>ref|XM_467809.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 270 cccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcggct 329 ||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 282 cccacctcaagtcccgctccaaccccgacgccgtcctcgccttcctcgccgacttcggcc 341 Query: 330 tctc 333 |||| Sbjct: 342 tctc 345
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 270 cccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcggct 329 ||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 31539907 cccacctcaagtcccgctccaaccccgacgccgtcctcgccttcctcgccgacttcggcc 31539966 Query: 330 tctc 333 |||| Sbjct: 31539967 tctc 31539970
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 270 cccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcggct 329 ||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 30467 cccacctcaagtcccgctccaaccccgacgccgtcctcgccttcctcgccgacttcggcc 30526 Query: 330 tctc 333 |||| Sbjct: 30527 tctc 30530
>dbj|AK065868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043F09, full insert sequence Length = 1448 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 270 cccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcggct 329 ||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 282 cccacctcaagtcccgctccaaccccgacgccgtcctcgccttcctcgccgacttcggcc 341 Query: 330 tctc 333 |||| Sbjct: 342 tctc 345
>dbj|AK109707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G07, full insert sequence Length = 1610 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 308 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 367 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 368 gcctctcccgcgccgacctcgccgccgtggtcgcc 402 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcac 234 |||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 234 cttctccgtcgaggagtacctcgtcgccacctgcggcctcac 275
>dbj|AK108795.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B11, full insert sequence Length = 1486 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||| |||||||| ||||||||||| |||||| ||||| ||||| ||| Sbjct: 304 tctcccacctcaggtcgcccgccaagcccgacgccgtgctcgccgtcctctccggcgtcg 363 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| |||||||| ||||||| || |||||| Sbjct: 364 gcctctcccgcgccgacctcgccgccgtggtcgcc 398 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcc 230 |||| |||| ||||||||||||||| |||||||||||| Sbjct: 230 cttctccgtcgaggagtacctcgtcgccacctgcggcc 267
>dbj|AK104692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G12, full insert sequence Length = 1375 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct: 263 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctctccgacctcg 322 Query: 327 gc 328 || Sbjct: 323 gc 324
>dbj|AK067095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A05, full insert sequence Length = 1432 Score = 83.8 bits (42), Expect = 4e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||| ||||| Sbjct: 247 tctcccacctcaggtccccctccaagcccgacgccgtcctcgccttcctctccgacctcg 306 Query: 327 gc 328 || Sbjct: 307 gc 308
>dbj|AK105790.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H05, full insert sequence Length = 1310 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||| ||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||| Sbjct: 276 tctcccgcctcaggtccccctccaagcccgacgccgccgtcgccttcctctccggcctcg 335 Query: 327 gcttctctggcgccgacatcgccgc 351 || |||| || ||| ||||||||| Sbjct: 336 gcctctcgcgctccggcatcgccgc 360 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacc 235 ||||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 202 cttcgccgtcgaggactacctggtcaccacctgcggcctcacc 244 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 tctcccctctccaccgcctcatctcc 151 |||||||||||||||||||| ||||| Sbjct: 141 tctcccctctccaccgcctcttctcc 166
>dbj|AK065678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F24, full insert sequence Length = 1472 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 |||||| ||||| ||||||| |||| |||||||||| | ||||||||||| ||||||||| Sbjct: 246 tctcccgcctcaggtccccctccaagcccgacgccgccgtcgccttcctctccggcctcg 305 Query: 327 gcttctctggcgccgacatcgccgc 351 || |||| || ||| ||||||||| Sbjct: 306 gcctctcgcgctccggcatcgccgc 330 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 193 cttcgccgtggaggagtacctcgtctccacctgcggcctcacc 235 ||||||||| ||||| ||||| ||| ||||||||||||||||| Sbjct: 172 cttcgccgtcgaggactacctggtcaccacctgcggcctcacc 214 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 126 tctcccctctccaccgcctcatctcc 151 |||||||||||||||||||| ||||| Sbjct: 111 tctcccctctccaccgcctcttctcc 136
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 ||||||||||||||||| || |||| || ||||| || |||||| ||||| |||| ||| Sbjct: 26310284 tctcccacctcaagtccgccaccaagccggacgcggtgctcgccatcctctccggggtcg 26310225 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| ||||| ||| ||||||||||| ||||| Sbjct: 26310224 gcctctccggcgcggacctcgccgcggtcttcgcc 26310190 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 201 tggaggagtacctcgtctccacctgcggcctcacc 235 ||||||| ||||||||| |||||||||||||||| Sbjct: 26310350 tggaggactacctcgtcgacacctgcggcctcacc 26310316 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Plus Query: 296 gacgccgtcctcgccttcctcgccggcctcggcttctctggcgccgacatcgcc 349 ||||||| | ||| ||||||||| | ||||||| |||| | ||||||||||||| Sbjct: 3823369 gacgccgccatcgtcttcctcgctgacctcggcctctccgccgccgacatcgcc 3823422
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 ||||||||||||||||| || |||| || ||||| || |||||| ||||| |||| ||| Sbjct: 39865 tctcccacctcaagtccgccaccaagccggacgcggtgctcgccatcctctccggggtcg 39806 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| ||||| ||| ||||||||||| ||||| Sbjct: 39805 gcctctccggcgcggacctcgccgcggtcttcgcc 39771 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Minus Query: 201 tggaggagtacctcgtctccacctgcggcctcacc 235 ||||||| ||||||||| |||||||||||||||| Sbjct: 39931 tggaggactacctcgtcgacacctgcggcctcacc 39897
>dbj|AK102859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111E02, full insert sequence Length = 2516 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 267 tctcccacctcaagtcccccgccaaccccgacgccgtcctcgccttcctcgccggcctcg 326 ||||||||||||||||| || |||| || ||||| || |||||| ||||| |||| ||| Sbjct: 303 tctcccacctcaagtccgccaccaagccggacgcggtgctcgccatcctctccggggtcg 362 Query: 327 gcttctctggcgccgacatcgccgcggtcgtcgcc 361 || |||| ||||| ||| ||||||||||| ||||| Sbjct: 363 gcctctccggcgcggacctcgccgcggtcttcgcc 397 Score = 46.1 bits (23), Expect = 0.095 Identities = 32/35 (91%) Strand = Plus / Plus Query: 201 tggaggagtacctcgtctccacctgcggcctcacc 235 ||||||| ||||||||| |||||||||||||||| Sbjct: 237 tggaggactacctcgtcgacacctgcggcctcacc 271
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 194 ttcgccgtggaggagtacctcgtctccacctgcggcctcacccga 238 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 36437 ttcgccgtcaaggagtacctcgtcgacacctgcggcctcacccga 36393
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 194 ttcgccgtggaggagtacctcgtctccacctgcggcctcacccga 238 |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 24270701 ttcgccgtcaaggagtacctcgtcgacacctgcggcctcacccga 24270657
>ref|XM_470547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1788 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 455 ccgtcctcgccttcctcgccgtcctcgccttc 486
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 4248999 ccgtcctcgccttcctcgccgtcctcgccttc 4249030 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 gccgtcctcgccttcctcgccggcctcggc 328 |||||||||||||||||| | ||||||||| Sbjct: 28714582 gccgtcctcgccttcctctctggcctcggc 28714611 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 cttctctggcgccgacatcgccgcggtcg 356 |||||| ||||||||| |||||||||||| Sbjct: 5746278 cttctccggcgccgacgtcgccgcggtcg 5746250 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tcctcgccttcctcgccggcctcg 326 |||||||||||||||||| ||||| Sbjct: 16066348 tcctcgccttcctcgccgtcctcg 16066325
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 296 gacgccgtcctcgccttcctcgccggcctcggcttctctggcgccgacatcgccgcggtc 355 ||||||||| ||| ||||||||||| ||||||| |||| | ||| |||||| || | | | Sbjct: 2853513 gacgccgtcgtcgtcttcctcgccgacctcggcctctccgccgctgacatcaccaccgcc 2853454 Query: 356 gtcgccagggacccgc 371 |||||| | ||||||| Sbjct: 2853453 gtcgccggcgacccgc 2853438 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 tcgccttcctcgccggcctcggc 328 ||||||||||||||||||||||| Sbjct: 1430796 tcgccttcctcgccggcctcggc 1430818 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 27051648 cgtcctcgccttcctcgccg 27051667 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 20963771 gcgccgacatcgtcgccgtcgccgccagggac 20963802
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 4249114 ccgtcctcgccttcctcgccgtcctcgccttc 4249145 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 gccgtcctcgccttcctcgccggcctcggc 328 |||||||||||||||||| | ||||||||| Sbjct: 28805906 gccgtcctcgccttcctctctggcctcggc 28805935 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 cttctctggcgccgacatcgccgcggtcg 356 |||||| ||||||||| |||||||||||| Sbjct: 5745491 cttctccggcgccgacgtcgccgcggtcg 5745463 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tcctcgccttcctcgccggcctcg 326 |||||||||||||||||| ||||| Sbjct: 16060881 tcctcgccttcctcgccgtcctcg 16060858
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 304 cctcgccttcctcgccggcctcggcttc 331 ||||||| |||||||||||||||||||| Sbjct: 493771 cctcgccctcctcgccggcctcggcttc 493744
>dbj|AK119228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A08, full insert sequence Length = 1912 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 350 ccgtcctcgccttcctcgccgtcctcgccttc 381
>dbj|AK099232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M20, full insert sequence Length = 1903 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 341 ccgtcctcgccttcctcgccgtcctcgccttc 372
>dbj|AK061335.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B10, full insert sequence Length = 1909 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 350 ccgtcctcgccttcctcgccgtcctcgccttc 381
>dbj|AK060840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D04, full insert sequence Length = 1907 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 345 ccgtcctcgccttcctcgccgtcctcgccttc 376
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 304 cctcgccttcctcgccggcctcggcttc 331 ||||||| |||||||||||||||||||| Sbjct: 144260 cctcgccctcctcgccggcctcggcttc 144233
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgccggcctcggcttc 331 ||||||||||||||||||||| ||||| |||| Sbjct: 77614 ccgtcctcgccttcctcgccgtcctcgccttc 77645
>ref|XM_956698.1| Neurospora crassa OR74A hypothetical protein (NCU05254.1) partial mRNA Length = 1458 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 295 cgacgccgtcctcgccttcctcg 317 ||||||||||||||||||||||| Sbjct: 853 cgacgccgtcctcgccttcctcg 831
>ref|XM_324610.1| Neurospora crassa OR74A hypothetical protein (NCU05254.1) partial mRNA Length = 1458 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 295 cgacgccgtcctcgccttcctcg 317 ||||||||||||||||||||||| Sbjct: 853 cgacgccgtcctcgccttcctcg 831
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 tcgccttcctcgccggcctcggc 328 ||||||||||||||||||||||| Sbjct: 89820 tcgccttcctcgccggcctcggc 89842
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 306 tcgccttcctcgccggcctcggc 328 ||||||||||||||||||||||| Sbjct: 508730 tcgccttcctcgccggcctcggc 508708
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Minus Query: 275 ctcaagtcccccgccaaccccgacgccgtcctcgccttcctc 316 ||||| ||| || |||||||||||||||| |||||| ||||| Sbjct: 28105 ctcaactcctcctccaaccccgacgccgtgctcgccctcctc 28064
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 285 ccgccaaccccgacgccgtcctcgcc 310 ||||||||| |||||||||||||||| Sbjct: 59848 ccgccaacctcgacgccgtcctcgcc 59873
>emb|AL139384.17| Human DNA sequence from clone RP11-88E10 on chromosome 13q33.1-34 Contains the 5' end of the ATP11A gene for Class VI ATPase type IIA, a novel gene, the 5' end of the TUBGCP3 gene for tubulin gamma complex associated protein 3 and two CpG islands, complete sequence Length = 187157 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 298 cgccgtcctcgccttcctcgccggcctcgg 327 ||||||||||||| ||||||||| |||||| Sbjct: 47536 cgccgtcctcgccgtcctcgccgtcctcgg 47565 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 cgccgtcctcgccttcctcgccggcctcg 326 ||||||||||||| ||||||||| ||||| Sbjct: 47401 cgccgtcctcgccatcctcgccgtcctcg 47429 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 cgccgtcctcgccttcctcgccggcctcg 326 ||||||||||||| ||||||||| ||||| Sbjct: 47383 cgccgtcctcgccgtcctcgccgtcctcg 47411
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 tcctcgccttcctcgccggcctcggc 328 |||||||||||||||||| ||||||| Sbjct: 19824 tcctcgccttcctcgccgccctcggc 19799
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 299 gccgtcctcgccttcctcgccggcctcggc 328 |||||||||||||||||| | ||||||||| Sbjct: 21563 gccgtcctcgccttcctctctggcctcggc 21592
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 44.1 bits (22), Expect = 0.37 Identities = 46/54 (85%) Strand = Plus / Plus Query: 296 gacgccgtcctcgccttcctcgccggcctcggcttctctggcgccgacatcgcc 349 ||||||| | ||| ||||||||| | ||||||| |||| | ||||||||||||| Sbjct: 88586 gacgccgccatcgtcttcctcgctgacctcggcctctccgccgccgacatcgcc 88639
>dbj|AK120471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109M21, full insert sequence Length = 1900 Score = 44.1 bits (22), Expect = 0.37 Identities = 37/42 (88%) Strand = Plus / Plus Query: 275 ctcaagtcccccgccaaccccgacgccgtcctcgccttcctc 316 ||||| ||| || |||||||||||||||| |||||| ||||| Sbjct: 273 ctcaactcctcctccaaccccgacgccgtgctcgccctcctc 314
>emb|AL731783.10| Mouse DNA sequence from clone RP23-124E18 on chromosome 2, complete sequence Length = 207209 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 109 cctctcgtctccctccgtctcccctctcca 138 |||||| ||||||||| ||||||||||||| Sbjct: 126033 cctctcctctccctccatctcccctctcca 126062
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 cgccgtcctcgccttcctcgccggcctcg 326 |||| ||||||||||||||||| |||||| Sbjct: 3403832 cgccttcctcgccttcctcgcctgcctcg 3403860
>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence Length = 162384 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tctccctccgtctcccctctc 136 ||||||||||||||||||||| Sbjct: 21896 tctccctccgtctcccctctc 21876
>gb|AC007346.6| Homo sapiens chromosome 16 clone RP11-467J12, complete sequence Length = 204130 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 ctccctccgtctcccctctcc 137 ||||||||||||||||||||| Sbjct: 167685 ctccctccgtctcccctctcc 167705
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 298 cgccgtcctcgccttcctcgccggcctcg 326 |||| ||||||||||||||||| |||||| Sbjct: 3144953 cgccttcctcgccttcctcgcctgcctcg 3144981
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 cgtcctcgccttcctcgccgg 321 ||||||||||||||||||||| Sbjct: 22179 cgtcctcgccttcctcgccgg 22159
>emb|AL645784.20| Mouse DNA sequence from clone RP23-11C7 on chromosome 11 Contains a zinc finger protein pseudogene, a chaperonin subunit 7 (eta) (Cct7) pseudogene, a novel pseudogene and a CpG island, complete sequence Length = 217352 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 accctcaccactctctcctcc 24 ||||||||||||||||||||| Sbjct: 177217 accctcaccactctctcctcc 177197
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 328 cttctctggcgccgacatcgccgcggtcg 356 |||||| ||||||||| |||||||||||| Sbjct: 84893 cttctccggcgccgacgtcgccgcggtcg 84921
>gb|AC007906.8| Homo sapiens chromosome 16 clone RP11-295M3, complete sequence Length = 183257 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 ctccctccgtctcccctctcc 137 ||||||||||||||||||||| Sbjct: 179115 ctccctccgtctcccctctcc 179095
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 ccccgacgccgtcctcgccttcctcgccg 320 ||||||||||||| ||||||||| ||||| Sbjct: 39987 ccccgacgccgtcgtcgccttccccgccg 40015
>dbj|AK099456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022M22, full insert sequence Length = 1102 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 cttctctggcgccgacatcgccgcggtcg 356 |||||| ||||||||| |||||||||||| Sbjct: 223 cttctccggcgccgacgtcgccgcggtcg 195
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cgtcctcgccttcctcgccgg 321 ||||||||||||||||||||| Sbjct: 1134545 cgtcctcgccttcctcgccgg 1134565
>ref|XM_550585.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2199 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 654 ccgacgccgtcctcgtcttcctcg 677
>ref|XM_550584.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1805 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 466 ccgacgccgtcctcgtcttcctcg 489
>ref|XM_550539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 726 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cgcgacgccgtgctccggct 84 |||||||||||||||||||| Sbjct: 511 cgcgacgccgtgctccggct 530
>ref|XM_473359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2220 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 2080 cgtcctcgccttcctcgccg 2061
>ref|NM_184603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 537 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 tcctcgccttcctcgccggcctcg 326 |||||||||||||||||| ||||| Sbjct: 32 tcctcgccttcctcgccgtcctcg 55
>gb|AC084295.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015K03, complete sequence Length = 89172 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 tcctcgccttcctcgccggcctcg 326 |||||||||||||||||| ||||| Sbjct: 60566 tcctcgccttcctcgccgtcctcg 60543
>gb|AC115869.9| Mus musculus chromosome 1, clone RP24-330M24, complete sequence Length = 158656 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tccctccgtctcccctctcc 137 |||||||||||||||||||| Sbjct: 53458 tccctccgtctcccctctcc 53477
>ref|XM_867552.1| PREDICTED: Bos taurus similar to Gamma-2-syntrophin (G2SYN) (Syntrophin 5) (SYN5) (LOC615686), mRNA Length = 1824 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ccgtcctcgccttcctcgcc 319 |||||||||||||||||||| Sbjct: 667 ccgtcctcgccttcctcgcc 686
>gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, complete sequence Length = 192990 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gctccggctccggcgcagcg 95 |||||||||||||||||||| Sbjct: 77245 gctccggctccggcgcagcg 77226
>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence Length = 225600 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 cttcctcgccggcctcggcttctc 333 |||| ||||||||||||||||||| Sbjct: 208429 cttcatcgccggcctcggcttctc 208406
>ref|XM_743079.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu5g01700) partial mRNA Length = 1989 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcctcgccttcctcgccggc 322 |||||||||||||||||||| Sbjct: 488 tcctcgccttcctcgccggc 469
>gb|AC116586.6| Mus musculus BAC clone RP23-402K15 from chromosome 7, complete sequence Length = 191174 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gtcaaggcctcccccaggat 267 |||||||||||||||||||| Sbjct: 95319 gtcaaggcctcccccaggat 95300
>emb|X68261.1|OSGT2 O.sativa gt-2 gene Length = 2957 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 2131 cgtcctcgccttcctcgccg 2112
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gctccggctccggcgcagcg 95 |||||||||||||||||||| Sbjct: 262730 gctccggctccggcgcagcg 262749
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 23370 cgtcctcgccttcctcgccg 23351
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 67003 gcgccgacatcgtcgccgtcgccgccagggac 67034
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 119349 cgtcctcgccttcctcgccg 119368
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gccgacatcgccgcggtcgtcgcc 361 ||||||||||||| |||||||||| Sbjct: 3326 gccgacatcgccggggtcgtcgcc 3349
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gccgacatcgccgcggtcgtcgcc 361 ||||||||||||| |||||||||| Sbjct: 9933 gccgacatcgccggggtcgtcgcc 9956
>gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 234610 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tccctccgtctcccctctcc 137 |||||||||||||||||||| Sbjct: 111430 tccctccgtctcccctctcc 111449
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccacctcgccgtcgcga 69 |||||||||||||||||||| Sbjct: 1779145 gcgccacctcgccgtcgcga 1779164
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 20934834 gcgccgacatcgtcgcgctcgccgccagggac 20934803
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cttcctcgccggcctcggct 329 |||||||||||||||||||| Sbjct: 6929565 cttcctcgccggcctcggct 6929546 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 ccccgacgccgtcctcgccttcctcgcc 319 |||| |||||||| |||||||||||||| Sbjct: 712819 cccccacgccgtcatcgccttcctcgcc 712792
>gb|AC007040.2|AC007040 Homo sapiens BAC clone RP11-298H3 from 2, complete sequence Length = 181671 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gtctccacctgcggcctcac 234 |||||||||||||||||||| Sbjct: 45402 gtctccacctgcggcctcac 45383
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 96270 ccgacgccgtcctcgtcttcctcg 96247
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcgacgccgtgctccggct 84 |||||||||||||||||||| Sbjct: 537 cgcgacgccgtgctccggct 518
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cgcgacgccgtgctccggct 84 |||||||||||||||||||| Sbjct: 87187 cgcgacgccgtgctccggct 87168
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 17708 ccgacgccgtcctcgtcttcctcg 17685
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 503 gcgccgacatcgtcgcgctcgccgccagggac 534
>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full insert sequence Length = 1351 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 492 gcgccgacatcgtcgccgtcgccgccagggac 523
>gb|U09118.1|GMU09118 Glycine max Century 84 p24 oleosin isoform A gene, complete cds Length = 1798 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gtcctcgccttcctcgccggcctc 325 ||||||||| |||||||||||||| Sbjct: 770 gtcctcgccgtcctcgccggcctc 793
>dbj|AK107139.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-D01, full insert sequence Length = 2023 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgtcctcgccttcctcgccg 320 |||||||||||||||||||| Sbjct: 1846 cgtcctcgccttcctcgccg 1827
>dbj|AK068886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A12, full insert sequence Length = 2200 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 655 ccgacgccgtcctcgtcttcctcg 678
>dbj|AK060698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F05, full insert sequence Length = 1814 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ccgacgccgtcctcgccttcctcg 317 ||||||||||||||| |||||||| Sbjct: 466 ccgacgccgtcctcgtcttcctcg 489
>gb|AY105520.1| Zea mays PCO080795 mRNA sequence Length = 1346 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 486 gcgccgacatcgtcgccgtcgccgccagggac 517
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 491 gcgccgacatcgtcgcgctcgccgccagggac 522
>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for class III peroxidase 54 precursor, exon 1 Length = 1038 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 410 gcgccgacatcgtcgccgtcgccgccagggac 441
>gb|AC117808.8| Mus musculus chromosome 1, clone RP24-570C24, complete sequence Length = 189713 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 cttcctcgccggcctcggcttctc 333 |||| ||||||||||||||||||| Sbjct: 186614 cttcatcgccggcctcggcttctc 186637
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 20861042 gcgccgacatcgtcgcgctcgccgccagggac 20861011
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| ||| |||| |||||||||| Sbjct: 9177 gcgccgacatcgtcgccgtcgccgccagggac 9208
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 20318 gcgccgacatcgtcgcgctcgccgccagggac 20287
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 336 gcgccgacatcgccgcggtcgtcgccagggac 367 |||||||||||| |||| ||| |||||||||| Sbjct: 24161 gcgccgacatcgtcgcgctcgccgccagggac 24192
>gb|AC150744.2| Mus musculus BAC clone RP24-98O8 from 7, complete sequence Length = 191727 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gtcaaggcctcccccaggat 267 |||||||||||||||||||| Sbjct: 163072 gtcaaggcctcccccaggat 163091
>emb|X00503.1|BTHOR02 Bovine prepro arginine vasopressin-neurophysin II gene Length = 2427 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ctccctccgtctcccctctccacc 140 |||||| ||||||||||||||||| Sbjct: 2387 ctcccttcgtctcccctctccacc 2364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,809,866 Number of Sequences: 3902068 Number of extensions: 2809866 Number of successful extensions: 71997 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68841 Number of HSP's gapped (non-prelim): 3155 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
