ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart07b03 |
|---|---|
| Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 81.3 bits (199), Expect = 1e-15 Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Frame = +1 Query: 94 LVALAMVASSCFLAVSGQKFNAXYXFGDSXSDTGXLCVNGPPAGLTLTQPPYGETFFGRA 273 +++LA + +C F A + FGDS SDTG G A PPYGETFF R+ Sbjct: 20 MLSLAYASETC-------DFPAIFNFGDSNSDTG-----GKAAAFYPLNPPYGETFFHRS 67 Query: 274 TCRCSNGRLVVDFLAEKFGLPLLKPSKQG-GADFKKGAXMAIIGAT 408 T R S+GRL++DF+AE F LP L P G++FK GA A G+T Sbjct: 68 TGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 65.1 bits (157), Expect = 9e-11 Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Frame = +1 Query: 151 FNAXYXFGDSXSDTGXLCVNGPPAGLTLTQPPYGETFFGRATCRCSNGRLVVDFLAEKFG 330 F A + FGDS SDTG L AG PP+G +FFG R +GRLV+DF+AE G Sbjct: 28 FPAIFNFGDSNSDTGGLSAAFGQAG-----PPHGSSFFGSPAGRYCDGRLVIDFIAESLG 82 Query: 331 LPLLKPSKQG-GADFKKGAXMAIIGA 405 LP L G++F GA A G+ Sbjct: 83 LPYLSAFLDSVGSNFSHGANFATAGS 108
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 38.9 bits (89), Expect = 0.007 Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 1/117 (0%) Frame = +1 Query: 4 PPXLPSVERSLLPLPVLQASXPATMASSPLLVALAMVASSCFLAVSGQKFNAXYXFGDSX 183 PP P+ + P P + S P A SP A S + A + FGDS Sbjct: 75 PPPSPAPKPVPPPSPSPKPSPPKPPAPSPKPSPPKPPAPSP-PKPQNKTIPAVFFFGDSI 133 Query: 184 SDTGXLCVNGPPAGLTLTQPPYGETF-FGRATCRCSNGRLVVDFLAEKFGLPLLKPS 351 DTG N L PYG F G AT R SNGR+ D++++ G+ + P+ Sbjct: 134 FDTGN--NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPA 188
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 36.2 bits (82), Expect = 0.046 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +1 Query: 157 AXYXFGDSXSDTGXLCVNGPPAGLTLTQPPYGETF-FGRATCRCSNGRLVVDFLAEKFGL 333 A + FGDS DTG N + PYG F F AT R SNG + D+LA+ G+ Sbjct: 204 AVFFFGDSVFDTGNN--NNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 334 PLLKPS 351 + P+ Sbjct: 262 KEIVPA 267
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 36.2 bits (82), Expect = 0.046 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 3/119 (2%) Frame = +1 Query: 94 LVALAMVASSCFLAVSGQKFNAXYXFGDSXSDTGXLCVNGPPAGLTLTQPPYGETFFGRA 273 + A M+A S + +N Y FGDS SD G GR Sbjct: 6 IFAPGMLALSISAISNAHAYNNLYVFGDSLSDGGN---------------------NGRY 44 Query: 274 TCRCSNG---RLVVDFLAEKFGLPLLKPSKQGGADFKKGAXMAIIGATTMGSSFFQSLG 441 T NG +L DF+A++ G+ L+ SK+GG ++ G A+ ++ Q +G Sbjct: 45 TVDGINGTESKLYNDFIAQQLGIELVN-SKKGGTNYAAGGATAVADLNNKHNTQDQVMG 102
>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Glycerophospholipid-cholesterol acyltransferase) (GCAT) Length = 335 Score = 31.6 bits (70), Expect = 1.1 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = +1 Query: 103 LAMVASSCFLAVSGQKFNAXYXFGDSXSDTGXLCVNGPPAGLTLTQPPYGETFFGRATCR 282 L +VA + A S F+ FGDS SDTG + G + PPY E R Sbjct: 9 LGLVALTVQAADSRPAFSRIVMFGDSLSDTGKM--YSKMRGYLPSSPPYYEG-------R 59 Query: 283 CSNGRLVVDFLAEKF-GLPLLKPSKQG 360 SNG + ++ L +F GL + ++ G Sbjct: 60 FSNGPVWLEQLTNEFPGLTIANEAEGG 86
>CATE_CAVPO (P25796) Cathepsin E precursor (EC 3.4.23.34)| Length = 391 Score = 29.6 bits (65), Expect = 4.3 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Frame = +1 Query: 187 DTGXLCVNGPPAGLTLTQPPYGETFFGRA-TCRCSNGRLVVDFLAEKFGLP-LLKPSKQG 360 DTG + GPP + Q G T+ + +C+N +++D G+P L P+ Sbjct: 276 DTGTSLITGPPGKIKQLQEALGATYVDEGYSVQCANLNMMLDVTFIINGVPYTLNPTAYT 335 Query: 361 GADFKKGAXMAIIG 402 DF G + G Sbjct: 336 LLDFVDGMQVCSTG 349
>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 76 MASSPLLVALAMVASSCFLAVSGQKFNAXYXFGDSXSDTGXLCVNGPPAGLT 231 MA PL+ A + + S + ++ FGDS SD G PAG T Sbjct: 4 MALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGST 55
>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 76 MASSPLLVALAMVASSCFLAVSGQKFNAXYXFGDSXSDTGXLCVNGPPAGLT 231 MA PL+ A + + S + ++ FGDS SD G PAG T Sbjct: 4 MALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGST 55
>TSP17_CAEEL (Q11098) Tetraspanin-17| Length = 243 Score = 29.3 bits (64), Expect = 5.6 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +2 Query: 38 SHSRCSKLAXXRQWRRP-RCSWRLRWWPRHASW 133 S++RC ++ RQWR CS RL W W Sbjct: 174 SYARCQQIGANRQWRHAVGCSERLMSWFNEQIW 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,682,084 Number of Sequences: 219361 Number of extensions: 783512 Number of successful extensions: 2872 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2867 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
