Clone Name | bart07a03 |
---|---|
Clone Library Name | barley_pub |
>emb|AL032637.1|CEY43F8C Caenorhabditis elegans YAC Y43F8C, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 1.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ctctgcgtctctctctctat 84 |||||||||||||||||||| Sbjct: 75766 ctctgcgtctctctctctat 75785
>ref|XM_953865.1| Neurospora crassa OR74A hypothetical protein (NCU09719.1) partial mRNA Length = 846 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 acctctgcgtctctctctc 81 ||||||||||||||||||| Sbjct: 242 acctctgcgtctctctctc 260
>ref|XM_330368.1| Neurospora crassa OR74A hypothetical protein (NCU09719.1) partial mRNA Length = 846 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 acctctgcgtctctctctc 81 ||||||||||||||||||| Sbjct: 242 acctctgcgtctctctctc 260
>gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, complete sequence Length = 187065 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 66224 cctctgcgtctctctctct 66206
>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence Length = 233685 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 159762 cctctgcgtctctctctct 159744
>gb|AC098745.4| Mus musculus BAC clone RP23-122P16 from 18, complete sequence Length = 213331 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 92542 cctctgcgtctctctctct 92560
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 4924543 cctctgcgtctctctctct 4924561
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 13879 cctctgcgtctctctctct 13861
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 4924525 cctctgcgtctctctctct 4924543
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 cctctgcgtctctctctct 82 ||||||||||||||||||| Sbjct: 35416 cctctgcgtctctctctct 35398 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,059,883 Number of Sequences: 3902068 Number of extensions: 5059883 Number of successful extensions: 76031 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75930 Number of HSP's gapped (non-prelim): 101 length of query: 94 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 73 effective length of database: 17,151,101,840 effective search space: 1252030434320 effective search space used: 1252030434320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)