ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
2dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
3emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 50 0.005
4gb|AY498874.1| Streptomyces lavendulae linear plasmid pSLV45 SLV... 44 0.29
5emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chr... 42 1.1
6gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.1
7gb|U43083.1|HSU43083 Human G alpha-q (Gaq) mRNA, complete cds 42 1.1
8ref|XM_525528.1| PREDICTED: Pan troglodytes similar to positive ... 40 4.5
9gb|U80745.1|HSU80745 Homo sapiens CTG7a mRNA, partial cds 40 4.5
10gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 4.5
11ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alph... 40 4.5
12ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alph... 40 4.5
13gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosom... 40 4.5
14ref|XM_788370.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.5
15ref|NM_015889.3| Homo sapiens PC2 (positive cofactor 2, multipro... 40 4.5
16ref|NM_001003891.1| Homo sapiens PC2 (positive cofactor 2, multi... 40 4.5
17emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 40 4.5
18emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 4.5
19emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4,... 40 4.5
20gb|BC013985.2| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 4.5
21gb|BC003078.1| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 4.5
22gb|BC017110.1| Homo sapiens PC2 (positive cofactor 2, multiprote... 40 4.5
23emb|CR860021.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0325 (from cl... 40 4.5
24dbj|AK126208.1| Homo sapiens cDNA FLJ44220 fis, clone THYMU30048... 40 4.5
25emb|CR611888.1| full-length cDNA clone CS0DI081YK14 of Placenta ... 40 4.5
26gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence 40 4.5
27gb|AF328769.1|AF328769 Homo sapiens PC2-glutamine-rich-associate... 40 4.5
28gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 40 4.5
29gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 i... 40 4.5
30gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11... 40 4.5
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
32gb|AY826923.1| Heterocapsa triquetra clone HTVPP1 vacuolar H+ py... 40 4.5
33gb|AF056191.1|AF056191 Homo sapiens TPA inducible protein mRNA, ... 40 4.5
34emb|AJ514427.1|ECA514427 Equus caballus mRNA for aquaporin 5 (aq... 40 4.5
35dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
36dbj|AK108999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
37emb|CR456537.1| Homo sapiens PCQAP full length open reading fram... 40 4.5
38gb|AY610211.1| Sus scrofa clone Clu_9762.scr.msk.p1.Contig1, mRN... 40 4.5
39gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome... 40 4.5
40dbj|AK090465.1| Homo sapiens mRNA for FLJ00386 protein 40 4.5 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 44       aaatggcgctcctcccgctgctcctcgcgggcctcatcgtctcctgctccgctcagcagc 103
                |||||||||||||||||||| ||||||||  |||| ||| ||||  | |||| |||||||
Sbjct: 26355420 aaatggcgctcctcccgctggtcctcgcgctcctcgtcgcctccgccgccgcgcagcagc 26355479

                                                     
Query: 104      caccgatgcagccgccgccaacacccaacgcgccgcc 140
                |||||| |||| |||||||  | ||||||||||||||
Sbjct: 26355480 caccgacgcagtcgccgccggctcccaacgcgccgcc 26355516



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 317      ccacccctcctccggctcccac 338
                ||||||||||||||||||||||
Sbjct: 26355582 ccacccctcctccggctcccac 26355603
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                         
Query: 44    aaatggcgctcctcccgctgctcctcgcgggcctcatcgtctcctgctccgctcagcagc 103
             |||||||||||||||||||| ||||||||  |||| ||| ||||  | |||| |||||||
Sbjct: 87772 aaatggcgctcctcccgctggtcctcgcgctcctcgtcgcctccgccgccgcgcagcagc 87831

                                                  
Query: 104   caccgatgcagccgccgccaacacccaacgcgccgcc 140
             |||||| |||| |||||||  | ||||||||||||||
Sbjct: 87832 caccgacgcagtcgccgccggctcccaacgcgccgcc 87868



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 317   ccacccctcctccggctcccac 338
             ||||||||||||||||||||||
Sbjct: 87934 ccacccctcctccggctcccac 87955
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 44    aaatggcgctcctcccgctgctcctcgcg 72
             |||||||||||||||||||| ||||||||
Sbjct: 78564 aaatggcgctcctcccgctggtcctcgcg 78592
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>gb|AY498874.1| Streptomyces lavendulae linear plasmid pSLV45 SLV.1 (SLV.1), SLV.1B
             (SLV.1B), SLV.2 (SLV.2), SLV.3 (SLV.3), SLV.4 (SLV.4),
             SLV.5 (SLV.5), SLV.6 (SLV.6), SLV.7, SLV.8, SLV.9 (SLV.9),
             SLV.10 (SLV.10), SLV.11 (SLV.11), SLV.12 (SLV.12), SLV.13
             (SLV.13), SLV.14 (SLV.14), SLV.15 (SLV.15), SLV.16
             (SLV.16), SLV.17 (SLV.17), SLV.18 (SLV.18), RegA (regA),
             TraSLVA (traSLVA), SLV.21 (SLV.21), ParSLV (parSLV),
             SLV.23 (SLV.23), SLV.24 (SLV.24), TpgSLV (tpgSLV), SLV.26
             (SLV.26), SLV.27 (SLV.27), TraSLVB (traSLVB), SLV.29
             (SLV.29), SLV.30 (SLV.30), TraSLR, SLV.32 (SLV.32), SLV.33
             (SLV.33), SLV.34 (SLV.34), SLV.35 (SLV.35), SLV.36
             (SLV.36), and SLV.37 (SLV.37) genes, complete cds
          Length = 41987

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 57    cccgctgctcctcgcgggcctc 78
             ||||||||||||||||||||||
Sbjct: 28389 cccgctgctcctcgcgggcctc 28410
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>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the 5'
              end of the GNAQ gene for guanine nucleotide binding protein
              (G protein) q polypeptide and a CpG island, complete
              sequence
          Length = 215399

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    gctcccaccgcgcccccggcc 216
              |||||||||||||||||||||
Sbjct: 167503 gctcccaccgcgcccccggcc 167483
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    tccggcgccgcaggctcccgc 317
              |||||||||||||||||||||
Sbjct: 288275 tccggcgccgcaggctcccgc 288255
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>gb|U43083.1|HSU43083 Human G alpha-q (Gaq) mRNA, complete cds
          Length = 1700

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 196 gctcccaccgcgcccccggcc 216
           |||||||||||||||||||||
Sbjct: 19  gctcccaccgcgcccccggcc 39
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>ref|XM_525528.1| PREDICTED: Pan troglodytes similar to positive cofactor 2,
            glutamine/Q-rich-associated protein isoform b;
            PC2-glutamine-rich-associated protein; TPA inducible
            gene-1; trinucleotide repeat containing 7; TPA inducible
            protein; activator-recruited cofactor, 105-kD; CTG repeat
            p... (LOC470144), mRNA
          Length = 4350

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   tcagcagccaccgatgcagc 115
            ||||||||||||||||||||
Sbjct: 2202 tcagcagccaccgatgcagc 2221
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>gb|U80745.1|HSU80745 Homo sapiens CTG7a mRNA, partial cds
          Length = 1048

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 258 tcagcagccaccgatgcagc 277
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      tcctcgcgggcctcatcgtc 84
               ||||||||||||||||||||
Sbjct: 1832230 tcctcgcgggcctcatcgtc 1832211
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>ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
           containing 1 (LOC671345), mRNA
          Length = 1720

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 187 ccgcctccagctcccaccgcgcccccggccgc 218
           ||||| ||||| ||| ||||||||||||||||
Sbjct: 154 ccgccaccagcgcccgccgcgcccccggccgc 185
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>ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
           containing 1 (LOC666704), mRNA
          Length = 2071

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 187 ccgcctccagctcccaccgcgcccccggccgc 218
           ||||| ||||| ||| ||||||||||||||||
Sbjct: 505 ccgccaccagcgcccgccgcgcccccggccgc 536
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>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence
          Length = 170182

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cctcctccggctcccacaag 341
             ||||||||||||||||||||
Sbjct: 33991 cctcctccggctcccacaag 33972
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>ref|XM_788370.1| PREDICTED: Strongylocentrotus purpuratus similar to lysyl-tRNA
            synthetase (LOC588700), mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   gggcctcatcgtctcctgct 91
            ||||||||||||||||||||
Sbjct: 1597 gggcctcatcgtctcctgct 1578
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>ref|NM_015889.3| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein (PCQAP), transcript
           variant 2, mRNA
          Length = 3264

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 890 tcagcagccaccgatgcagc 909
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>ref|NM_001003891.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein (PCQAP), transcript
           variant 1, mRNA
          Length = 3384

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 890 tcagcagccaccgatgcagc 909
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>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     tcctcgcgggcctcatcgtc 84
              ||||||||||||||||||||
Sbjct: 110066 tcctcgcgggcctcatcgtc 110047
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>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14
          Length = 300050

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     tcctcgcgggcctcatcgtc 84
              ||||||||||||||||||||
Sbjct: 212689 tcctcgcgggcctcatcgtc 212670
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>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08,
              complete sequence
          Length = 145670

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ctcctcccgctgctcctcgc 71
              ||||||||||||||||||||
Sbjct: 106847 ctcctcccgctgctcctcgc 106828
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>gb|BC013985.2| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, transcript variant
           2, mRNA (cDNA clone MGC:20267 IMAGE:3506327), complete
           cds
          Length = 3227

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 850 tcagcagccaccgatgcagc 869
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>gb|BC003078.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, mRNA (cDNA clone
           IMAGE:3504608), partial cds
          Length = 3240

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 868 tcagcagccaccgatgcagc 887
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>gb|BC017110.1| Homo sapiens PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein, mRNA (cDNA clone
           IMAGE:3604453)
          Length = 3067

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 575 tcagcagccaccgatgcagc 594
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>emb|CR860021.1| Pongo pygmaeus mRNA; cDNA DKFZp459O0325 (from clone DKFZp459O0325)
          Length = 3256

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 887 tcagcagccaccgatgcagc 906
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>dbj|AK126208.1| Homo sapiens cDNA FLJ44220 fis, clone THYMU3004866, moderately
            similar to Homo sapiens PC2 (positive cofactor 2,
            multiprotein complex) glutamine/Q-rich-associated protein
            (PCQAP)
          Length = 3622

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   tcagcagccaccgatgcagc 115
            ||||||||||||||||||||
Sbjct: 1272 tcagcagccaccgatgcagc 1291
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>emb|CR611888.1| full-length cDNA clone CS0DI081YK14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2700

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 362 tcagcagccaccgatgcagc 381
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>gb|AC128639.13| Papio anubis clone rp41-2d18, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    tcagcagccaccgatgcagc 115
             ||||||||||||||||||||
Sbjct: 62736 tcagcagccaccgatgcagc 62717
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>gb|AF328769.1|AF328769 Homo sapiens PC2-glutamine-rich-associated protein (PCQAP) mRNA,
           complete cds
          Length = 3170

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 804 tcagcagccaccgatgcagc 823
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
              complete sequence
          Length = 145356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     tcagcagccaccgatgcagc 115
              ||||||||||||||||||||
Sbjct: 103902 tcagcagccaccgatgcagc 103921
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>gb|AC006946.20| Homo sapiens Chromosome 22q11 Pac Clone p109l3 in CES region, complete
              sequence
          Length = 193159

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gcgctcctcccgctgctcct 68
              ||||||||||||||||||||
Sbjct: 104289 gcgctcctcccgctgctcct 104270
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>gb|AC007050.25| Homo sapiens chromosome 22 clone bac32 map 22q11, complete sequence
          Length = 163908

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    tcagcagccaccgatgcagc 115
             ||||||||||||||||||||
Sbjct: 14680 tcagcagccaccgatgcagc 14699
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 52       ctcctcccgctgctcctcgc 71
                ||||||||||||||||||||
Sbjct: 19325015 ctcctcccgctgctcctcgc 19324996
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>gb|AY826923.1| Heterocapsa triquetra clone HTVPP1 vacuolar H+ pyrophosphatase
           mRNA, partial cds
          Length = 396

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  ccgctgctcctcgcgggcctcatc 81
           |||||||||||||| |||||||||
Sbjct: 123 ccgctgctcctcgctggcctcatc 146
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>gb|AF056191.1|AF056191 Homo sapiens TPA inducible protein mRNA, complete cds
          Length = 3334

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 896 tcagcagccaccgatgcagc 915
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>emb|AJ514427.1|ECA514427 Equus caballus mRNA for aquaporin 5 (aqp5 gene)
          Length = 727

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  cgctcctcccgctgctcctc 69
           ||||||||||||||||||||
Sbjct: 219 cgctcctcccgctgctcctc 200
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>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full
           insert sequence
          Length = 3464

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 cctccggccggcaacccgcc 191
           ||||||||||||||||||||
Sbjct: 881 cctccggccggcaacccgcc 900
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>dbj|AK108999.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G09, full
           insert sequence
          Length = 1206

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 196 gctcccaccgcgcccccggccgcc 219
           ||||| ||||||||||||||||||
Sbjct: 324 gctccgaccgcgcccccggccgcc 347
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>emb|CR456537.1| Homo sapiens PCQAP full length open reading frame (ORF) cDNA clone
           (cDNA clone C22ORF:pGEM.PCQAP.V2)
          Length = 2226

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 626 tcagcagccaccgatgcagc 645
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>gb|AY610211.1| Sus scrofa clone Clu_9762.scr.msk.p1.Contig1, mRNA sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cgctcctcccgctgctcctc 69
            ||||||||||||||||||||
Sbjct: 2038 cgctcctcccgctgctcctc 2057
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>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 187    ccgcctccagctcccaccgcgcccccggccgc 218
              ||||| ||||| ||| ||||||||||||||||
Sbjct: 164887 ccgccaccagcgcccgccgcgcccccggccgc 164918
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>dbj|AK090465.1| Homo sapiens mRNA for FLJ00386 protein
          Length = 3349

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  tcagcagccaccgatgcagc 115
           ||||||||||||||||||||
Sbjct: 879 tcagcagccaccgatgcagc 898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,393,951
Number of Sequences: 3902068
Number of extensions: 2393951
Number of successful extensions: 58436
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58189
Number of HSP's gapped (non-prelim): 247
length of query: 341
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 319
effective length of database: 17,147,199,772
effective search space: 5469956727268
effective search space used: 5469956727268
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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