>Y5621_ARATH (O81488) PHD finger protein At5g26210|
          Length = 255

 Score =  135 bits (339), Expect = 9e-32
 Identities = 65/95 (68%), Positives = 72/95 (75%)
 Frame = +2

Query: 230 AGAPYASRTAEEVFRDFRGRRAGMIKALTQEVDKFYQLCDPEKENLCLYGYPNETWEVTL 409
           AG  Y  RT EEVFRDF+GRRAGMIKALT +V +F++LCDPEKENLCLYG+PNE WEV L
Sbjct: 3   AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62

Query: 410 XXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVH 514
                        LGINFARDGM EKDWL+LVAVH
Sbjct: 63  PAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVH 97

>UBP28_HUMAN (Q96RU2) Ubiquitin carboxyl-terminal hydrolase 28 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 28)
           (Ubiquitin-specific-processing protease 28)
           (Deubiquitinating enzyme 28)
          Length = 1077

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = +2

Query: 233 GAPYASRTAEEVFRDFRGRRAGMIKALTQEVDKFYQLC--------DPEKENLCLYGYPN 388
           G   A   A + F D  G  AG+IKA  +E  + YQL         DP  +++ +Y + N
Sbjct: 777 GVILAIAKARQTF-DRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYFFQN 835

Query: 389 E 391
           E
Sbjct: 836 E 836


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,891,007
Number of Sequences: 219361
Number of extensions: 980488
Number of successful extensions: 3168
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3165
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)