Clone Name | bart06h05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GLYA2_PSEF5 (Q4K4P6) Serine hydroxymethyltransferase 2 (EC 2.1.2... | 27 | 9.1 |
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>GLYA2_PSEF5 (Q4K4P6) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine| methylase 2) (SHMT 2) Length = 417 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 84 LTHDPRVSRSTKMSSALAVDVDARTG 161 LTH +VS S K+ +A+ +D RTG Sbjct: 127 LTHGAKVSSSGKLYNAVQYGIDTRTG 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,162,841 Number of Sequences: 219361 Number of extensions: 255010 Number of successful extensions: 651 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 646 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 651 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)