ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06h05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477464.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 93.7 bits (47), Expect = 4e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 278 tctcccggcccacccggcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 ||||||||| ||||||||||| ||||||||||||| |||||||||||||| | || ||| Sbjct: 189 tctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggc 248 Query: 338 gttcctgtcccaggcgcgcgcgctcgc 364 ||||||||| | || |||||||||||| Sbjct: 249 gttcctgtcgcgggtgcgcgcgctcgc 275
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 93.7 bits (47), Expect = 4e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 278 tctcccggcccacccggcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 ||||||||| ||||||||||| ||||||||||||| |||||||||||||| | || ||| Sbjct: 10668807 tctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggc 10668866 Query: 338 gttcctgtcccaggcgcgcgcgctcgc 364 ||||||||| | || |||||||||||| Sbjct: 10668867 gttcctgtcgcgggtgcgcgcgctcgc 10668893
>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474B11 Length = 141702 Score = 93.7 bits (47), Expect = 4e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 278 tctcccggcccacccggcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 ||||||||| ||||||||||| ||||||||||||| |||||||||||||| | || ||| Sbjct: 111471 tctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggc 111530 Query: 338 gttcctgtcccaggcgcgcgcgctcgc 364 ||||||||| | || |||||||||||| Sbjct: 111531 gttcctgtcgcgggtgcgcgcgctcgc 111557
>dbj|AK108656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E06, full insert sequence Length = 1740 Score = 93.7 bits (47), Expect = 4e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 278 tctcccggcccacccggcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 ||||||||| ||||||||||| ||||||||||||| |||||||||||||| | || ||| Sbjct: 206 tctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggc 265 Query: 338 gttcctgtcccaggcgcgcgcgctcgc 364 ||||||||| | || |||||||||||| Sbjct: 266 gttcctgtcgcgggtgcgcgcgctcgc 292
>gb|AC101956.5| Mus musculus chromosome 5, clone RP24-166L23, complete sequence Length = 183807 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 56 ctccgcgcctcccacctcctcgctccgcc 84 ||||||||||||||||||||| ||||||| Sbjct: 84566 ctccgcgcctcccacctcctccctccgcc 84538
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 48.1 bits (24), Expect = 0.021 Identities = 24/24 (100%) Strand = Plus / Plus Query: 288 cacccggcgctcctcgacgcggcc 311 |||||||||||||||||||||||| Sbjct: 112579 cacccggcgctcctcgacgcggcc 112602
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 gcgccctcgccgtcgacgtcgacgcc 152 ||||| |||||||||||||||||||| Sbjct: 2565649 gcgccatcgccgtcgacgtcgacgcc 2565674
>ref|XM_616701.2| PREDICTED: Bos taurus growth differentiation factor 7 (GDF7), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 345 tcccaggcgcgcgcgctcgcggccgc 370 ||||||||||||||||||| |||||| Sbjct: 1168 tcccaggcgcgcgcgctcggggccgc 1193
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 gcgctgtcgctgctgccgtcgc 276 |||||||||||||||||||||| Sbjct: 273178 gcgctgtcgctgctgccgtcgc 273157
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 gcgccctcgccgtcgacgtcgacgcc 152 ||||| |||||||||||||||||||| Sbjct: 144964 gcgccatcgccgtcgacgtcgacgcc 144989
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 gcgccctcgccgtcgacgtcgacgcc 152 ||||| |||||||||||||||||||| Sbjct: 36398 gcgccatcgccgtcgacgtcgacgcc 36423
>gb|AY028139.1| Lycium ferocissimum internal transcribed spacer 1, complete sequence Length = 251 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 344 gtcccaggcgcgcgcgctcgcg 365 |||||||||||||||||||||| Sbjct: 99 gtcccaggcgcgcgcgctcgcg 120
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 353 gcgcgcgctcgcggccgccctg 374 |||||||||||||||||||||| Sbjct: 6578553 gcgcgcgctcgcggccgccctg 6578532
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 caggcgcgcgcgctcgcggccg 369 |||||||||||||||||||||| Sbjct: 889319 caggcgcgcgcgctcgcggccg 889340 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 625069 ggcgcgcgcgctcgcggccg 625050
>ref|XM_480436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3078 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 gccgccacctccgcgcctcccacctcctc 76 |||||||||||| |||||||| ||||||| Sbjct: 265 gccgccacctccccgcctcccccctcctc 237
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ccacccggcgctcctcgacgc 307 ||||||||||||||||||||| Sbjct: 57468 ccacccggcgctcctcgacgc 57448
>emb|Z94044.2|HS154P24 Human DNA sequence from clone RP1-154P24 on chromosome Xp11.1-11.23 Contains the 5' end of the gene for upstream regulatory element binding protein 1 (UREB1) and three CpG islands, complete sequence Length = 110870 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ggccgccacctccgcgcctcc 67 ||||||||||||||||||||| Sbjct: 67638 ggccgccacctccgcgcctcc 67658
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 ccacccggcgctcctcgacgc 307 ||||||||||||||||||||| Sbjct: 36524 ccacccggcgctcctcgacgc 36544
>ref|NM_167387.1| Drosophila melanogaster CG32611-RB (CG32611), mRNA Length = 3313 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctgtcgctgctgccgtcgcc 277 ||||||||||||||||||||| Sbjct: 458 gctgtcgctgctgccgtcgcc 438
>gb|BT022126.1| Drosophila melanogaster IP08939 full insert cDNA Length = 3001 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctgtcgctgctgccgtcgcc 277 ||||||||||||||||||||| Sbjct: 947 gctgtcgctgctgccgtcgcc 927
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cccacctcctcgctccgcctc 86 ||||||||||||||||||||| Sbjct: 24149481 cccacctcctcgctccgcctc 24149501
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 gccgccacctccgcgcctcccacctcctc 76 |||||||||||| |||||||| ||||||| Sbjct: 5121516 gccgccacctccccgcctcccccctcctc 5121544
>gb|AC010705.15|AC010705 Drosophila melanogaster, chromosome X, region 12D-12E, BAC clone BACR28F21, complete sequence Length = 163958 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctgtcgctgctgccgtcgcc 277 ||||||||||||||||||||| Sbjct: 57857 gctgtcgctgctgccgtcgcc 57877
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 gcgcgcgcgctcgcggccgcc 371 ||||||||||||||||||||| Sbjct: 1007001 gcgcgcgcgctcgcggccgcc 1007021 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 caggcgcgcgcgctcgcggccgcc 371 ||||||||||||||||||| |||| Sbjct: 4580465 caggcgcgcgcgctcgcggacgcc 4580442 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 2835525 ggcgcgcgcgctcgcggccg 2835506
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 gccgccacctccgcgcctcccacctcctc 76 |||||||||||| |||||||| ||||||| Sbjct: 71280 gccgccacctccccgcctcccccctcctc 71308
>dbj|AK099689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B17, full insert sequence Length = 3320 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 gccgccacctccgcgcctcccacctcctc 76 |||||||||||| |||||||| ||||||| Sbjct: 265 gccgccacctccccgcctcccccctcctc 237
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctgtcgctgctgccgtcgcc 277 ||||||||||||||||||||| Sbjct: 22045 gctgtcgctgctgccgtcgcc 22065
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 288 cacccggcgctcctcgacgcggcca 312 ||||||||||| ||||||||||||| Sbjct: 1968968 cacccggcgctgctcgacgcggcca 1968944
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cccacctcctcgctccgcctc 86 ||||||||||||||||||||| Sbjct: 24077687 cccacctcctcgctccgcctc 24077707
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cccacctcctcgctccgcctc 86 ||||||||||||||||||||| Sbjct: 34172 cccacctcctcgctccgcctc 34192
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 ccacccggcgctcctcgacgc 307 ||||||||||||||||||||| Sbjct: 80095 ccacccggcgctcctcgacgc 80115
>gb|DQ185599.1| Drosophila paralutea Iris-B gene, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tgtccattgccgcagccttccttg 25 ||||||||||||||| |||||||| Sbjct: 1211 tgtccattgccgcagacttccttg 1188
>ref|XM_465652.1| Oryza sativa (japonica cultivar-group), mRNA Length = 834 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cctccgcgcctcccacctcctcgc 78 ||||||||||||||||||| |||| Sbjct: 310 cctccgcgcctcccacctcttcgc 287
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ccaggcgcgcgcgctcgcgg 366 |||||||||||||||||||| Sbjct: 1494625 ccaggcgcgcgcgctcgcgg 1494644
>ref|NM_190316.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1740 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 |||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 229 gcgctcgtcgacgccgccacgggtattgccgtctcctacccggc 272
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 299 cctcgacgcggccacgggcgaggccgtc 326 |||||||| |||||||||||| |||||| Sbjct: 133337 cctcgacgaggccacgggcgatgccgtc 133310
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 35333 ggcgcgcgcgctcgcggccg 35314
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 1200018 ggcgcgcgcgctcgcggccg 1200037
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 839178 ggcgcgcgcgctcgcggccg 839159
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gttcctgtcccaggcgcgcg 357 |||||||||||||||||||| Sbjct: 484003 gttcctgtcccaggcgcgcg 484022
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 ccacccggcgctcctcgacgcggc 310 |||||||||||| ||||||||||| Sbjct: 45175 ccacccggcgctgctcgacgcggc 45198
>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis gene cluster, partial sequence Length = 103450 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cacccggcgctcctcgacgc 307 |||||||||||||||||||| Sbjct: 20706 cacccggcgctcctcgacgc 20725
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cacccggcgctcctcgacgc 307 |||||||||||||||||||| Sbjct: 1308506 cacccggcgctcctcgacgc 1308525
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 2515955 ggcgcgcgcgctcgcggccg 2515974
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 681594 ggcgcgcgcgctcgcggccg 681575
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgccctcgccgtcgacgtcg 147 |||||||||||||||||||| Sbjct: 106741 cgccctcgccgtcgacgtcg 106722
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 ccacccggcgctcctcgacgcggc 310 |||||||||||| ||||||||||| Sbjct: 28770 ccacccggcgctgctcgacgcggc 28793
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 |||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 53200 gcgctcgtcgacgccgccacgggtattgccgtctcctacccggc 53243
>gb|AF318063.2|AF318063S1 Pseudomonas fluorescens NCIMB 10586 mupirocin biosynthetic gene cluster Length = 75138 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gcgccctcgccgtcgacgtc 146 |||||||||||||||||||| Sbjct: 5019 gcgccctcgccgtcgacgtc 5000
>dbj|AK056016.1| Homo sapiens cDNA FLJ31454 fis, clone NT2NE2001142, moderately similar to NUCLEOLAR AUTOANTIGEN NO55 Length = 1865 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 gccttccttgtcagtcgcagacat 39 ||||||||||||||| |||||||| Sbjct: 369 gccttccttgtcagtggcagacat 392
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 tcgacgcggccacgggcgaggccg 324 ||||||||||||||| |||||||| Sbjct: 632563 tcgacgcggccacggccgaggccg 632586
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 246979 ggcgcgcgcgctcgcggccg 246960
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cctccgcgcctcccacctcctcgc 78 ||||||||||||||||||| |||| Sbjct: 16601847 cctccgcgcctcccacctcttcgc 16601824
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 |||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 39251494 gcgctcgtcgacgccgccacgggtattgccgtctcctacccggc 39251537
>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence Length = 181720 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gtcccaggcgcgcgcgctcg 363 |||||||||||||||||||| Sbjct: 99019 gtcccaggcgcgcgcgctcg 99000
>dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes for type I polyketide synthase, type I polyketide synthase, type I polyketide synthase, complete and partial cds Length = 45102 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 287 ccacccggcgctcctcgacgcggc 310 ||||||||| |||||||||||||| Sbjct: 21703 ccacccggccctcctcgacgcggc 21726
>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide mycinamicin, partial and comeplete cds Length = 58343 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gcccacccggcgctcctcgacgcg 308 |||||||||||||| ||||||||| Sbjct: 23043 gcccacccggcgctgctcgacgcg 23066
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 cgccctcgccgtcgacgtcgacgc 151 ||||||||||| |||||||||||| Sbjct: 6155679 cgccctcgccgacgacgtcgacgc 6155656 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ccggcgctcctcgacgcggccacg 314 ||||||||||||||||||| |||| Sbjct: 4903058 ccggcgctcctcgacgcggtcacg 4903081 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cacccggcgctcctcgacgcggcc 311 |||||||||||| ||||||||||| Sbjct: 3589957 cacccggcgctcttcgacgcggcc 3589934
>gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177820 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcgccgtcgacgtcgacgcc 152 |||||||||||||||||||| Sbjct: 34209 tcgccgtcgacgtcgacgcc 34190
>gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 137639 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcgccgtcgacgtcgacgcc 152 |||||||||||||||||||| Sbjct: 130448 tcgccgtcgacgtcgacgcc 130429
>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence Length = 178345 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 gccttccttgtcagtcgcagacat 39 ||||||||||||||| |||||||| Sbjct: 24356 gccttccttgtcagtggcagacat 24333
>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene cluster, partial sequence Length = 77534 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacccggcgctcctcgacgcggcc 311 ||||||||||| |||||||||||| Sbjct: 65731 cacccggcgctgctcgacgcggcc 65754
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 |||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 127254 gcgctcgtcgacgccgccacgggtattgccgtctcctacccggc 127297
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 294 gcgctcctcgacgcggccacgggcgaggccgtctcctacccggc 337 |||||| ||||||| |||||||| ||||||||||||||||| Sbjct: 32740 gcgctcgtcgacgccgccacgggtattgccgtctcctacccggc 32783
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tcgacgcggccacgggcgag 320 |||||||||||||||||||| Sbjct: 283166 tcgacgcggccacgggcgag 283147
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cctccgcgcctcccacctcctcgc 78 ||||||||||||||||||| |||| Sbjct: 175262 cctccgcgcctcccacctcttcgc 175239
>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519B12 Length = 147542 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cctccgcgcctcccacctcctcgc 78 ||||||||||||||||||| |||| Sbjct: 43814 cctccgcgcctcccacctcttcgc 43791
>dbj|AB109208.1| Burkholderia glumae flgF, flgG, flgH, flgI, flgE genes for flagellar basal-body rod protein, flagellar basal-body rod protein, flagellar L-ring protein, flagellar P-ring protein, flagellar hook protein, partial and complete cds Length = 3967 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ggcgcgcgcgctcgcggccg 369 |||||||||||||||||||| Sbjct: 2550 ggcgcgcgcgctcgcggccg 2531
>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete sequence Length = 318665 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 tcgccgtcgacgtcgacgcc 152 |||||||||||||||||||| Sbjct: 271091 tcgccgtcgacgtcgacgcc 271072
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 gacgcggccacgggcgaggccgtc 326 ||||||||||||| |||||||||| Sbjct: 584985 gacgcggccacggtcgaggccgtc 585008
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 gcgcgcgctcgcggccgccctgcg 376 ||||||||||| |||||||||||| Sbjct: 85162 gcgcgcgctcgaggccgccctgcg 85139
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 cacccggcgctcctcgacgcggcc 311 |||||||||||| ||||||||||| Sbjct: 47848 cacccggcgctcttcgacgcggcc 47871
>dbj|AB017641.1| Micromonospora griseorubida gene for polyketide synthase, complete cds Length = 17101 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gcccacccggcgctcctcgacgcg 308 |||||||||||||| ||||||||| Sbjct: 16630 gcccacccggcgctgctcgacgcg 16653 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,915,223 Number of Sequences: 3902068 Number of extensions: 1915223 Number of successful extensions: 52713 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 48293 Number of HSP's gapped (non-prelim): 4425 length of query: 383 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 361 effective length of database: 17,147,199,772 effective search space: 6190139117692 effective search space used: 6190139117692 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
