ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 39 0.009
2HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 33 0.62
3Y438_BRUSU (Q8G290) Hypothetical RNA methyltransferase BR0438 (E... 30 3.1
4HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 30 3.1
5FSYA_DROME (P25028) Mitosis initiation protein fs(1)Ya 30 5.3
6COAT_TGMV (P03560) Coat protein (CP) 29 6.9
7SYC2_PHOPR (Q6LHY2) Putative cysteinyl-tRNA synthetase 2 (EC 6.1... 29 9.0
8COX1_CHOCR (P48866) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) ... 29 9.0
94CL2_SOLTU (P31685) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL... 29 9.0

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +1

Query: 256 PNHDRSLFLRPRDPPSYDASXDGMFTPWHHEHEVNTLTAXENLVERLYYVHGRDIERLRQ 435
           P HDR L LRPR+PP    S    F P+        L    N  + L+ +    I  L+Q
Sbjct: 192 PVHDRYLHLRPRNPPQIKYS-HSQFEPFVPSLPNELLDGKTNKSQTLFILSREQINTLKQ 250

Query: 436 M--ASRGGQRSSRVQALSAYIWKVVA 507
               S    R S  + ++A++W+ V+
Sbjct: 251 KLDLSNNTTRLSTYEVVAAHVWRSVS 276



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = +1

Query: 256 PNHDRSLFLRPRDPPSYDASXDGMFTPWHHEHEVNTLTAXENLVERLYYVHGRDIERLRQ 435
           P HDR L LR R+PP    +    F P+        L    N  + L+ +    I  L+Q
Sbjct: 192 PVHDRYLHLRLRNPPQIKYT-HSQFEPFVPSLPNELLDGKTNKSQTLFKLSREQINTLKQ 250

Query: 436 ---MASRGGQRSSRVQALSAYIWKVVA 507
              ++S    R S  + ++ ++W+ V+
Sbjct: 251 KLDLSSNTTTRLSTYEVVAGHVWRSVS 277



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>Y438_BRUSU (Q8G290) Hypothetical RNA methyltransferase BR0438 (EC 2.1.1.-)|
          Length = 415

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +1

Query: 268 RSLFLRPRDPPSYDASXDGMFTPWHHEHEVNTLTAXENLVERLYYVHGRDIERLRQMA-- 441
           R LF RP  P         +F P     E   L   ++ VE++  +    +   R +A  
Sbjct: 323 RDLFRRPLMPKELLPYNAVVFDPPRAGAEEQALELAKSKVEKVVAISCNPVTLARDLAIL 382

Query: 442 SRGGQRSSRVQALSAYIWKVVAGVVA 519
            +GG R  RV  +  ++W      VA
Sbjct: 383 QKGGYRIERVTPIDQFLWSAHVEAVA 408



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +1

Query: 256 PNHDRSLFLRPRDPPSYDASXDGMFTPWHHEHEVNTLTAXENLVERLYYVHGRDIERLRQ 435
           P HDR L L PR+PP    +    F P+        L    +  + L+ +    I  L+Q
Sbjct: 192 PVHDRYLHLCPRNPPQIKYT-HSQFEPFVPSLPKELLDGKTSKSQTLFKLSREQINTLKQ 250

Query: 436 MA--SRGGQRSSRVQALSAYIWKVVA 507
               S    R S  + ++ ++W+ V+
Sbjct: 251 KLDWSNTTTRLSTYEVVAGHVWRSVS 276



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>FSYA_DROME (P25028) Mitosis initiation protein fs(1)Ya|
          Length = 696

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 238 VGTIAVPNHDRSLFLRPRDPPSYDASXDGMFTPWHHE 348
           + + + P H  S+F +P++P +++AS  G  +  +HE
Sbjct: 222 IRSTSTPLHVESVFAKPKEPITFNASTGGHVSSIYHE 258



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>COAT_TGMV (P03560) Coat protein (CP)|
          Length = 247

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
 Frame = +1

Query: 247 IAVPNHDRS-LFLRPRDPPSYDASXDGMFTPWHHEHEVNTLTAXENLVERLYYVHGRDIE 423
           I + NH  S +F   RD   Y    D        ++E +T T   +L +R   +H     
Sbjct: 117 IKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVIH----- 171

Query: 424 RLRQMASRGGQRSSRVQALSAYIWKVVAGVV 516
           R     + GGQ +S  QAL    WKV   VV
Sbjct: 172 RFHAKVT-GGQYASNEQALVRRFWKVNNNVV 201



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>SYC2_PHOPR (Q6LHY2) Putative cysteinyl-tRNA synthetase 2 (EC 6.1.1.16)|
           (Cysteine--tRNA ligase 2) (CysRS 2)
          Length = 457

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 334 PWHHEHEVNTLTAXENLVERLYYVHGRDIERLRQMASRGGQRSSRVQALSA 486
           P HH +E+    A    V+  Y++HG  ++  ++  S+ G  S R+ AL A
Sbjct: 246 PVHHTNEIAQCQAKNGHVQANYWLHGYFLQLKKEKISKSG-TSLRLDALVA 295



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>COX1_CHOCR (P48866) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 532

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
 Frame = +1

Query: 73  VLAVSXLDLIHRSTQSSVACIYRKPASGDFSAVTAAFH--------AELPASM-LVRMWS 225
           VLA S LD+    T   VA  +   + G   A+ A F+         + P ++  +  WS
Sbjct: 364 VLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFWS 423

Query: 226 EFLCVGTIAVPNHDRSLFLRPRDPPSYDASXDG 324
            F+ V    +P H   L   PR  P Y  +  G
Sbjct: 424 TFIGVNLTFMPMHFLGLAGMPRRIPDYPDAYAG 456



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>4CL2_SOLTU (P31685) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)|
           (4-coumaroyl-CoA synthase 2)
          Length = 545

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 19  IXVVSRHVVKASPCVEPYVLAVSXLDLIHRSTQSSVACI 135
           + ++ +H V   P V P VLA++   L+H    SSV  +
Sbjct: 270 LELIPKHKVTIGPFVPPIVLAIAKSPLVHNYDLSSVRTV 308


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,932,250
Number of Sequences: 219361
Number of extensions: 1264159
Number of successful extensions: 3913
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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