>ref|XM_477237.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 479 tgtcggcgtacatttggaaggtcgtcgccggcgtcgtggccgcgtc 524
           ||||||||||| | |||||||   |||||||||| |||||||||||
Sbjct: 515 tgtcggcgtacctgtggaaggcgctcgccggcgtggtggccgcgtc 560

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 499     gtcgtcgccggcgtcgtggccg 520
               ||||||||||||||||||||||
Sbjct: 3386194 gtcgtcgccggcgtcgtggccg 3386215

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 479     tgtcggcgtacatttggaaggtcgtcgccggcgtcgtggccgcgtc 524
               ||||||||||| | |||||||   |||||||||| |||||||||||
Sbjct: 8091915 tgtcggcgtacctgtggaaggcgctcgccggcgtggtggccgcgtc 8091960



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 502      gtcgccggcgtcgtggccgc 521
                ||||||||||||||||||||
Sbjct: 23273359 gtcgccggcgtcgtggccgc 23273378

>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 479   tgtcggcgtacatttggaaggtcgtcgccggcgtcgtggccgcgtc 524
             ||||||||||| | |||||||   |||||||||| |||||||||||
Sbjct: 25687 tgtcggcgtacctgtggaaggcgctcgccggcgtggtggccgcgtc 25732

>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence
          Length = 193474

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    tcttccgtggcatgcatctac 138
              |||||||||||||||||||||
Sbjct: 161899 tcttccgtggcatgcatctac 161919

>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete
             sequence
          Length = 217725

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   tcttccgtggcatgcatctac 138
             |||||||||||||||||||||
Sbjct: 22919 tcttccgtggcatgcatctac 22939

>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 502    gtcgccggcgtcgtggccgcg 522
              |||||||||||||||||||||
Sbjct: 147857 gtcgccggcgtcgtggccgcg 147877

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 276     gttcctccggccgcgcgaccc 296
               |||||||||||||||||||||
Sbjct: 3443762 gttcctccggccgcgcgaccc 3443742

>ref|XM_483738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 gtcgccggcgtcgtggccgc 521
           ||||||||||||||||||||
Sbjct: 697 gtcgccggcgtcgtggccgc 678

>ref|XM_483737.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 502  gtcgccggcgtcgtggccgc 521
            ||||||||||||||||||||
Sbjct: 1466 gtcgccggcgtcgtggccgc 1447

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 501    cgtcgccggcgtcgtggccg 520
              ||||||||||||||||||||
Sbjct: 720417 cgtcgccggcgtcgtggccg 720398

>ref|XM_478833.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2030

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 gtcgccggcgtcgtggccgc 521
           ||||||||||||||||||||
Sbjct: 291 gtcgccggcgtcgtggccgc 272

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 501     cgtcgccggcgtcgtggccg 520
               ||||||||||||||||||||
Sbjct: 2796696 cgtcgccggcgtcgtggccg 2796715

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 500     tcgtcgccggcgtcgtggccgcgt 523
               |||||||||||| |||||||||||
Sbjct: 1940621 tcgtcgccggcggcgtggccgcgt 1940598

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 500     tcgtcgccggcgtcgtggcc 519
               ||||||||||||||||||||
Sbjct: 2782127 tcgtcgccggcgtcgtggcc 2782146

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 502      gtcgccggcgtcgtggccgc 521
                ||||||||||||||||||||
Sbjct: 27839251 gtcgccggcgtcgtggccgc 27839232

>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   gtcgccggcgtcgtggccgc 521
             ||||||||||||||||||||
Sbjct: 28617 gtcgccggcgtcgtggccgc 28636

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 499     gtcgtcgccggcgtcgtggccgcg 522
               ||||||||||||||||||| ||||
Sbjct: 2125594 gtcgtcgccggcgtcgtggtcgcg 2125571

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   gtcgccggcgtcgtggccgc 521
             ||||||||||||||||||||
Sbjct: 47329 gtcgccggcgtcgtggccgc 47310

>dbj|AK099715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085B05, full
            insert sequence
          Length = 2606

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 502  gtcgccggcgtcgtggccgc 521
            ||||||||||||||||||||
Sbjct: 1466 gtcgccggcgtcgtggccgc 1447

>dbj|AK106839.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-H03, full
           insert sequence
          Length = 2031

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 gtcgccggcgtcgtggccgc 521
           ||||||||||||||||||||
Sbjct: 292 gtcgccggcgtcgtggccgc 273

>dbj|AK106793.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A11, full
           insert sequence
          Length = 1775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 gtcgccggcgtcgtggccgc 521
           ||||||||||||||||||||
Sbjct: 697 gtcgccggcgtcgtggccgc 678


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,199,557
Number of Sequences: 3902068
Number of extensions: 2199557
Number of successful extensions: 39591
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38775
Number of HSP's gapped (non-prelim): 816
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)