ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 Score = 654 bits (330), Expect = 0.0 Identities = 361/374 (96%) Strand = Plus / Plus Query: 115 gcccggatcgcgatggctgccgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 98 gcccggatcgcgatggccgccgccgccgtcgccgccgactccaagatcgacggcctccgc 157 Query: 175 gacgccntcgccnagctcggcgagatcagcgagaacgagaaggccgggttcatcagcctc 234 |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 158 gacgccgtcgccaagctcggcgagatcagcgaaaacgagaaggccgggttcatcagcctc 217 Query: 235 gtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaagatccagaccccc 294 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 218 gtctcgcgctacctcagcggcgaggcggagcagatcgagtggagcaagatccagaccccc 277 Query: 295 accgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagatctcgacgcc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 accgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagatctcgacgcc 337 Query: 355 ntgaaggccctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccacc 414 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 338 atgaaggccctgctcgacaagctcgtggtgctcaagctcaacggaggcctcggcaccacc 397 Query: 415 atgggctgcaccggccccnagtctgtcattgaagttcgcantgggtttgcatttcttgac 474 |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 398 atgggctgcaccggccccaagtctgtcattgaagttcgcaatgggtttacatttcttgac 457 Query: 475 cttattgtgattca 488 |||||||||||||| Sbjct: 458 cttattgtgattca 471 Score = 44.1 bits (22), Expect = 0.42 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ttccagtcatctgacatctccnccc 68 ||||||||||||||||||||| ||| Sbjct: 27 ttccagtcatctgacatctcctccc 51
>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA sequence Length = 1814 Score = 646 bits (326), Expect = 0.0 Identities = 360/374 (96%) Strand = Plus / Plus Query: 115 gcccggatcgcgatggctgccgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 93 gcccggatcgcgatggccgccgccgccgtcgccgccgactccaagatcgacggcctccgc 152 Query: 175 gacgccntcgccnagctcggcgagatcagcgagaacgagaaggccgggttcatcagcctc 234 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gacgccgtcgccaagctcggcgagatcagcgagaacgagaaggccgggttcatcagcctc 212 Query: 235 gtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaagatccagaccccc 294 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 213 gtctcgcgctacctcagcggcgaggcggagcagatcgagtggagcaagatccagaccccc 272 Query: 295 accgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagatctcgacgcc 354 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 accgatgaggtggtggtgccctacgacaccctcgcgccccctcccgaagatctcgacgcc 332 Query: 355 ntgaaggccctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccacc 414 ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 333 atgaaggcgctgctcgacaagctcgtggtgctcaagctcaacggaggcctcggcaccacc 392 Query: 415 atgggctgcaccggccccnagtctgtcattgaagttcgcantgggtttgcatttcttgac 474 |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 393 atgggctgcaccggccccaagtctgtcattgaagttcgcaatgggtttacatttcttgac 452 Query: 475 cttattgtgattca 488 |||||||||||||| Sbjct: 453 cttattgtgattca 466
>gb|AY178448.1| Bambusa oldhamii UDP-glucose pyrophosphorylase (UGP) mRNA, complete cds Length = 1731 Score = 367 bits (185), Expect = 2e-98 Identities = 286/322 (88%) Strand = Plus / Plus Query: 169 ctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccgggttcatc 228 |||||||||||| | ||| |||||| | |||||||||||||||||||||||||||||| | Sbjct: 145 ctccgcgacgccgttgcccagctcgaccagatcagcgagaacgagaaggccgggttcacc 204 Query: 229 agcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaagatccag 288 |||||||| || ||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 205 agcctcgtgtcccgctacctcagtggggaggcggagcagatcgagtggagtaagatccag 264 Query: 289 acccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagatctc 348 ||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 265 accccgaccgatgaggtggtggtgccgtacgacaccctcgcgccggctcccgaagatctc 324 Query: 349 gacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggaggcctcggc 408 ||||| |||| ||||||||| | ||||||||||||| |||||||||||| ||||| Sbjct: 325 gacgcgacgaagaagctgctcgacaaactcgtggtgctcaagctcaacggagggctcggg 384 Query: 409 accaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggtttgcattt 468 || |||||||||||||| || ||| ||||||||||||||||||||| ||||||| ||||| Sbjct: 385 acaaccatgggctgcactggtcccaagtctgtcattgaagttcgcaatgggtttacattt 444 Query: 469 cttgaccttattgtgattcaaa 490 |||||||| || |||||||||| Sbjct: 445 cttgacctaatcgtgattcaaa 466
>gb|AY103595.1| Zea mays PCO108378 mRNA sequence Length = 1960 Score = 315 bits (159), Expect = 7e-83 Identities = 259/294 (88%) Strand = Plus / Plus Query: 197 agatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggcg 256 |||||||||||||||||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 214 agatcagcgagaacgagaaggccgggttcatcagcctcgtgtcacgctacctcagtgggg 273 Query: 257 aggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgtggtgccct 316 |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 274 aggcggagcagatcgagtggagcaagatccagaccccgaccgatgaggtagtggtgccgt 333 Query: 317 acgacaccctcgcgccccctcccgaagatctcgacgccntgaaggccctgctcgacnagc 376 |||| |||||| || | ||||| ||||||||||| | |||| ||||| ||| ||| Sbjct: 334 acgataccctcacgtcgcctcctgaagatctcgaggagacgaagaagctgctggacaagc 393 Query: 377 tcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccnagt 436 |||| ||||||| |||||||||||| ||||| || ||||||||||||||||| ||| ||| Sbjct: 394 tcgttgtgctcaagctcaacggagggctcgggacgaccatgggctgcaccggacccaagt 453 Query: 437 ctgtcattgaagttcgcantgggtttgcatttcttgaccttattgtgattcaaa 490 ||||||||||||| |||| |||||| |||| |||||||||||||||||||||| Sbjct: 454 ctgtcattgaagtccgcaatgggttcacattccttgaccttattgtgattcaaa 507
>dbj|AK119232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E10, full insert sequence Length = 1696 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 114 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 173 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 174 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 233 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 234 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 293 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 294 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 353 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 354 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 413 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 414 ttacgtttctagaccttattgtgattcaaa 443
>dbj|AK119197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C12, full insert sequence Length = 1727 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 114 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 173 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 174 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 233 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 234 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 293 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 294 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 353 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 354 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 413 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 414 ttacgtttctagaccttattgtgattcaaa 443
>dbj|AK104344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B12, full insert sequence Length = 1695 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 112 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 171 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 172 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 231 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 232 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 291 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 292 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 351 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 352 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 411 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 412 ttacgtttctagaccttattgtgattcaaa 441
>dbj|AK103930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E03, full insert sequence Length = 1694 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 106 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 165 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 166 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 225 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 226 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 285 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 286 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 345 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 346 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 405 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 406 ttacgtttctagaccttattgtgattcaaa 435
>dbj|AK065780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M01, full insert sequence Length = 1750 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 113 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 172 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 173 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 232 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 233 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 292 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 293 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 352 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 353 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 412 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 413 ttacgtttctagaccttattgtgattcaaa 442
>dbj|AB062606.1| Oryza sativa (japonica cultivar-group) UGP mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1700 Score = 311 bits (157), Expect = 1e-81 Identities = 285/330 (86%) Strand = Plus / Plus Query: 161 tcgacggcctccgcgacgccntcgccnagctcggcgagatcagcgagaacgagaaggccg 220 |||| |||||||||| |||| || | |||||| | |||||||||||||||||||| ||| Sbjct: 93 tcgagggcctccgcgccgccaccgacaagctcgaccagatcagcgagaacgagaagtccg 152 Query: 221 ggttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagca 280 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 153 ggttcatcagcctcgtttcgcgctacctcagcggcgaggcggagcagatcgagtggagta 212 Query: 281 agatccagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccg 340 ||||||||||||| ||||| ||||| ||||| ||||||||||| ||| || | |||||| Sbjct: 213 agatccagaccccgaccgacgaggtggtggttccctacgacacgctctcggctgctcccg 272 Query: 341 aagatctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggag 400 |||||||| ||| |||| ||||||||| | ||||| ||||||| |||||| |||| Sbjct: 273 aagatctcaacgagacgaagaagctgctcgacaaactcgtcgtgctcaagctcaatggag 332 Query: 401 gcctcggcaccaccatgggctgcaccggccccnagtctgtcattgaagttcgcantgggt 460 ||||||| || |||||||||||||| || ||| |||||||||||||||| |||| ||| | Sbjct: 333 gcctcgggacgaccatgggctgcactggtcccaagtctgtcattgaagtccgcaatggct 392 Query: 461 ttgcatttcttgaccttattgtgattcaaa 490 || | ||||| ||||||||||||||||||| Sbjct: 393 ttacgtttctagaccttattgtgattcaaa 422
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 249 cagcggcgaggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgt 308 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 72959 cagcggcgaggcggagcagatcgagtggagtaagatccagaccccgaccgacgaggtggt 73018 Query: 309 ggtgccctacgacac 323 ||| ||||||||||| Sbjct: 73019 ggttccctacgacac 73033 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 201 cagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 |||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 72828 cagcgagaacgagaagtccgggttcatcagcctcgtttcgcgctacctcag 72878 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/62 (88%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 ||||||||| | ||||| ||||||| |||||| ||||||||||| || |||||||||||| Sbjct: 73201 ctgctcgacaaactcgtcgtgctcaagctcaatggaggcctcgggacgaccatgggctgc 73260 Query: 424 ac 425 || Sbjct: 73261 ac 73262 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 435 gtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgtgattcaaa 490 ||||||||||||||| |||| ||| ||| | ||||| ||||||||||||||||||| Sbjct: 74286 gtctgtcattgaagtccgcaatggctttacgtttctagaccttattgtgattcaaa 74341
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 249 cagcggcgaggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgt 308 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 21616333 cagcggcgaggcggagcagatcgagtggagtaagatccagaccccgaccgacgaggtggt 21616392 Query: 309 ggtgccctacgacac 323 ||| ||||||||||| Sbjct: 21616393 ggttccctacgacac 21616407 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 201 cagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 |||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 21616202 cagcgagaacgagaagtccgggttcatcagcctcgtttcgcgctacctcag 21616252 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/62 (88%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 ||||||||| | ||||| ||||||| |||||| ||||||||||| || |||||||||||| Sbjct: 21616575 ctgctcgacaaactcgtcgtgctcaagctcaatggaggcctcgggacgaccatgggctgc 21616634 Query: 424 ac 425 || Sbjct: 21616635 ac 21616636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 435 gtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgtgattcaaa 490 ||||||||||||||| |||| ||| ||| | ||||| ||||||||||||||||||| Sbjct: 21617660 gtctgtcattgaagtccgcaatggctttacgtttctagaccttattgtgattcaaa 21617715 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacaccg 29 ||||||||||||||||||||||||| Sbjct: 15441082 cacacacccacaccacaccacaccg 15441058 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 120 gatcgcgatggctgccgccgccgtcgccgcca 151 |||||||||||| ||||| |||| |||||||| Sbjct: 21967345 gatcgcgatggccgccgcggccgccgccgcca 21967314
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 249 cagcggcgaggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgt 308 |||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct: 24657 cagcggcgaggcggagcagatcgagtggagtaagatccagaccccgaccgacgaggtggt 24716 Query: 309 ggtgccctacgacac 323 ||| ||||||||||| Sbjct: 24717 ggttccctacgacac 24731 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 201 cagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 |||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 24526 cagcgagaacgagaagtccgggttcatcagcctcgtttcgcgctacctcag 24576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/62 (88%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 ||||||||| | ||||| ||||||| |||||| ||||||||||| || |||||||||||| Sbjct: 24899 ctgctcgacaaactcgtcgtgctcaagctcaatggaggcctcgggacgaccatgggctgc 24958 Query: 424 ac 425 || Sbjct: 24959 ac 24960 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 435 gtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgtgattcaaa 490 ||||||||||||||| |||| ||| ||| | ||||| ||||||||||||||||||| Sbjct: 25984 gtctgtcattgaagtccgcaatggctttacgtttctagaccttattgtgattcaaa 26039
>ref|XM_463887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1769 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 197 agatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggcg 256 ||||||| || ||||||||| |||||||||||||||||||| | ||||||||||| |||| Sbjct: 116 agatcagtgacaacgagaagtccgggttcatcagcctcgtcgcccgctacctcagtggcg 175 Query: 257 aggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgtggtgccct 316 ||| |||||| | || ||| |||||||| || || || || ||||| |||||||| | Sbjct: 176 aggaggagcatgtggaatgggcaaagatccacacgccgacggacgaggtggtggtgccgt 235 Query: 317 acgacaccct 326 |||||||||| Sbjct: 236 acgacaccct 245 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 283 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 342 Query: 424 accgg 428 ||||| Sbjct: 343 accgg 347
>gb|AF249880.1|AF249880 Oryza sativa subsp. indica UDP-glucose pyrophosphorylase (UDPGase) mRNA, complete cds Length = 1746 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 197 agatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggcg 256 ||||||| || ||||||||| |||||||||||||||||||| | ||||||||||| |||| Sbjct: 103 agatcagtgacaacgagaagtccgggttcatcagcctcgtcgcccgctacctcagtggcg 162 Query: 257 aggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgtggtgccct 316 ||| |||||| | || ||| |||||||| || || || || ||||| |||||||| | Sbjct: 163 aggaggagcatgtggaatgggcaaagatccacacgccgacggacgaggtggtggtgccgt 222 Query: 317 acgacaccct 326 |||||||||| Sbjct: 223 acgacaccct 232 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 270 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 329 Query: 424 accgg 428 ||||| Sbjct: 330 accgg 334
>dbj|AK071248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D10, full insert sequence Length = 1769 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 197 agatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggcg 256 ||||||| || ||||||||| |||||||||||||||||||| | ||||||||||| |||| Sbjct: 116 agatcagtgacaacgagaagtccgggttcatcagcctcgtcgcccgctacctcagtggcg 175 Query: 257 aggcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgtggtgccct 316 ||| |||||| | || ||| |||||||| || || || || ||||| |||||||| | Sbjct: 176 aggaggagcatgtggaatgggcaaagatccacacgccgacggacgaggtggtggtgccgt 235 Query: 317 acgacaccct 326 |||||||||| Sbjct: 236 acgacaccct 245 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Plus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 283 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 342 Query: 424 accgg 428 ||||| Sbjct: 343 accgg 347
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Minus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 929424 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 929365 Query: 424 accgg 428 ||||| Sbjct: 929364 accgg 929360 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 208 aacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 ||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 929699 aacgagaagtccgggttcatcagcctcgtcgcccgctacctcag 929656
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Minus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 138632 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 138573 Query: 424 accgg 428 ||||| Sbjct: 138572 accgg 138568 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 208 aacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 ||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 138907 aacgagaagtccgggttcatcagcctcgtcgcccgctacctcag 138864
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 77.8 bits (39), Expect = 3e-11 Identities = 58/65 (89%) Strand = Plus / Minus Query: 364 ctgctcgacnagctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgc 423 |||||| || |||||| ||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 843 ctgctcaacaagctcgccgtgctcaagctcaacggcggcctcggcaccaccatgggatgc 784 Query: 424 accgg 428 ||||| Sbjct: 783 accgg 779 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 208 aacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 ||||||||| |||||||||||||||||||| | ||||||||||| Sbjct: 1118 aacgagaagtccgggttcatcagcctcgtcgcccgctacctcag 1075
>gb|AF435969.1|AF435969 Amorpha fruticosa UDP-glucose pyrophosphorylase (ugp) mRNA, complete cds Length = 1831 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 199 atcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggcgag 258 ||||||||||| |||||| || ||||||| ||||||||| ||||||||||| ||||| Sbjct: 208 atcagcgagaatgagaagaaaggattcatcaacctcgtctctcgctacctcagtggcgaa 267 Query: 259 gcggagcaaatcgagtggagcaagatccagacccccaccgatgaggtcgtggtgccctac 318 ||| | || | || ||||||||||||||||| || |||||||| || || ||||| ||| Sbjct: 268 gcgcaacatgtggaatggagcaagatccagacgcctaccgatgaagtggttgtgccttac 327 Query: 319 ga 320 || Sbjct: 328 ga 329 Score = 48.1 bits (24), Expect = 0.027 Identities = 87/109 (79%) Strand = Plus / Plus Query: 374 agctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccn 433 |||| |||||| | | |||||| |||||| | || || || ||||| ||||| || || Sbjct: 383 agcttgtggtgttgaagctcaatggaggcttggggacaactatgggttgcactggtccaa 442 Query: 434 agtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgt 482 ||||||||||||||||||| |||||| |||||||||| || ||||| Sbjct: 443 agtctgtcattgaagttcgtgatgggttgacatttcttgatctgattgt 491
>gb|AF203909.1|AF203909 Musa acuminata UDP-glucose pyrophosphorylase (MWUGPA) mRNA, complete cds Length = 1722 Score = 63.9 bits (32), Expect = 5e-07 Identities = 175/224 (78%) Strand = Plus / Plus Query: 226 atcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaagatc 285 |||||||| || || ||||| || || |||||||| || || ||||||||||| |||||| Sbjct: 156 atcagcctagtgtctcgctatctgagtggcgaggcagaacagatcgagtggagtaagatc 215 Query: 286 cagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagat 345 ||||| || || ||||| || || ||||| || || ||||| | || ||||| |||||| Sbjct: 216 cagactccgactgatgaagtggtcgtgccttatgataccctgtcaccacctccggaagat 275 Query: 346 ctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggaggcctc 405 || || || ||| || |||||| |||| | |||||| | |||||| ||||| || Sbjct: 276 cttgaggcaaccaagaaacttctcgacaagcttgcggtgctaaagctcaatggaggactg 335 Query: 406 ggcaccaccatgggctgcaccggccccnagtctgtcattgaagt 449 || ||||||||||| ||||| || ||| | ||||| |||||||| Sbjct: 336 ggaaccaccatgggatgcacggggcccaaatctgttattgaagt 379
>dbj|AB013353.1| Pyrus pyrifolia mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1699 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 197 agatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcag 251 |||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| Sbjct: 150 agatcagcgagaacgagaagaacggattcatcaacctcgtctctcgctacgtcag 204 Score = 60.0 bits (30), Expect = 7e-06 Identities = 49/56 (87%) Strand = Plus / Plus Query: 415 atgggctgcaccggccccnagtctgtcattgaagttcgcantgggtttgcatttct 470 ||||| ||||| |||||| ||||||||||||||||||| | |||||| ||||||| Sbjct: 371 atgggttgcactggccccaagtctgtcattgaagttcgaaatgggttgacatttct 426
>gb|DQ302093.1| Populus tremula x Populus tremuloides UDP-glucose pyrophosphorylase (UGPase-2) mRNA, complete cds Length = 1758 Score = 60.0 bits (30), Expect = 7e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 434 agtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgt 482 ||||||||||||||||||| | ||| || ||||||||||||||||||| Sbjct: 343 agtctgtcattgaagttcgtaatggattgacatttcttgaccttattgt 391
>gb|AF542010.1| Griffithsia japonica UDP glucose pyrophosphorylase mRNA, partial cds Length = 583 Score = 58.0 bits (29), Expect = 3e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 385 ctcangctcaacggaggcctcggcaccaccatgggctgca 424 |||| ||||||||| |||||||||||| |||||||||||| Sbjct: 350 ctcaagctcaacggcggcctcggcacctccatgggctgca 389
>emb|Z99963.1|MAZ99963 Musa acuminata mRNA for putative UDP glucose pyrophosphorylase (clone pBAN EU24) Length = 798 Score = 56.0 bits (28), Expect = 1e-04 Identities = 175/224 (78%) Strand = Plus / Plus Query: 226 atcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaagatc 285 |||||||| || || ||||| || || |||||||| || || ||||||||||| |||||| Sbjct: 164 atcagcctagtgtctcgctatctgagtggcgaggcagaacagatcgagtggagtaagatc 223 Query: 286 cagacccccaccgatgaggtcgtggtgccctacgacaccctcgcgccccctcccgaagat 345 ||||| || || ||||| || || ||||| || || ||||| | || ||||| |||||| Sbjct: 224 cagactccgactgatgaagtggtcgtgccttatgataccctgtcaccacctccggaagat 283 Query: 346 ctcgacgccntgaaggccctgctcgacnagctcgtggtgctcangctcaacggaggcctc 405 || || || ||| || ||||||||||| | |||||| | |||||| ||||| || Sbjct: 284 cttgaggcaaccaagaaacttctcgacnagcttgcggtgctaaagctcaatggaggactg 343 Query: 406 ggcaccaccatgggctgcaccggccccnagtctgtcattgaagt 449 || ||||||||||| ||||| || || | ||||| |||||||| Sbjct: 344 ggaaccaccatgggatgcacggggcctaaatctgttattgaagt 387
>dbj|AB069659.1| Pyrus pyrifolia ugp-pc mRNA for UGPase PC, complete cds Length = 1807 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 415 atgggctgcaccggccccnagtctgtcattgaagttcg 452 ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 357 atgggttgcaccggtcccaagtctgtcattgaagttcg 394
>dbj|AB069658.1| Pyrus pyrifolia ugp-pa mRNA for UGPase PA, complete cds Length = 1742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 415 atgggctgcaccggccccnagtctgtcattgaagttcg 452 ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 354 atgggttgcaccggtcccaagtctgtcattgaagttcg 391
>ref|NM_111195.2| Arabidopsis thaliana UGP; UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT3G03250 (UGP) mRNA, complete cds Length = 1837 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 230 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 289 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 290 atccagactcctaccgatgaaatcgttgttccctacga 327
>gb|AY260746.1| Populus tremula x Populus tremuloides UDP-glucose pyrophosphorylase mRNA, complete cds Length = 1760 Score = 52.0 bits (26), Expect = 0.002 Identities = 43/49 (87%) Strand = Plus / Plus Query: 434 agtctgtcattgaagttcgcantgggtttgcatttcttgaccttattgt 482 ||||||||||||||||||| | ||| | ||||||||||||||||||| Sbjct: 361 agtctgtcattgaagttcgtaatggactgacatttcttgaccttattgt 409
>ref|XM_499685.1| Yarrowia lipolytica CLIB122, YALI0A02310g predicted mRNA Length = 1491 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/68 (83%) Strand = Plus / Plus Query: 385 ctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccnagtctgtcatt 444 |||| ||| ||||| || ||||| ||| ||||||||||| ||||||| |||| |||||| Sbjct: 310 ctcaagcttaacggtggtctcggtacctccatgggctgcgtcggccccaagtccgtcatt 369 Query: 445 gaagttcg 452 || ||||| Sbjct: 370 gaggttcg 377
>gb|AY059148.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1441 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 85 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 144 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 145 atccagactcctaccgatgaaatcgttgttccctacga 182
>gb|AY035071.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1795 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 171 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 230 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 231 atccagactcctaccgatgaaatcgttgttccctacga 268
>gb|AF361605.1| Arabidopsis thaliana AT3g03250/T17B22_6 mRNA, complete cds Length = 1739 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 156 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 215 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 216 atccagactcctaccgatgaaatcgttgttccctacga 253
>emb|BX825911.1|CNS0A4WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 148 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 207 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 208 atccagactcctaccgatgaaatcgttgttccctacga 245
>emb|BX823422.1|CNS0A4T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 223 ttcatcagcctcgtctcgcgctacctcagcggcgaggcggagcaaatcgagtggagcaag 282 ||||||||||| || || || ||||| ||||| ||||| | || || |||||||| ||| Sbjct: 96 ttcatcagcctggtttcacgttacctgagcggtgaggcacaacacattgagtggagtaag 155 Query: 283 atccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| || |||||||| |||| || |||||||| Sbjct: 156 atccagactcctaccgatgaaatcgttgttccctacga 193
>emb|AL845445.14| Mouse DNA sequence from clone RP23-380B10 on chromosome 2, complete sequence Length = 126636 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 |||||||||||||||||||||||||| Sbjct: 10436 cacacacacccacaccacaccacacc 10461
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/68 (83%) Strand = Plus / Plus Query: 385 ctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccnagtctgtcatt 444 |||| ||| ||||| || ||||| ||| ||||||||||| ||||||| |||| |||||| Sbjct: 291637 ctcaagcttaacggtggtctcggtacctccatgggctgcgtcggccccaagtccgtcatt 291696 Query: 445 gaagttcg 452 || ||||| Sbjct: 291697 gaggttcg 291704
>ref|XM_463427.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 50.1 bits (25), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||||| || ||||||| | ||||||| Sbjct: 501 cgccgccgtcgccgccaacgccgagatcgaggacctccgc 540
>gb|AC164292.4| Mus musculus BAC clone RP24-177C20 from chromosome 3, complete sequence Length = 185822 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||||||||||||||||||| Sbjct: 113962 cacacacacccacaccacaccacac 113938
>ref|XM_959360.1| Neurospora crassa OR74A hypothetical protein (NCU02797.1) partial mRNA Length = 1641 Score = 50.1 bits (25), Expect = 0.007 Identities = 50/59 (84%) Strand = Plus / Plus Query: 385 ctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccnagtctgtcat 443 |||| ||||||||| || ||||| ||| ||||||||||| ||||||| |||| ||||| Sbjct: 451 ctcaagctcaacggtggtctcggtacctccatgggctgcgtcggccccaagtccgtcat 509
>ref|XM_329984.1| Neurospora crassa OR74A hypothetical protein (NCU02797.1) partial mRNA Length = 1641 Score = 50.1 bits (25), Expect = 0.007 Identities = 50/59 (84%) Strand = Plus / Plus Query: 385 ctcangctcaacggaggcctcggcaccaccatgggctgcaccggccccnagtctgtcat 443 |||| ||||||||| || ||||| ||| ||||||||||| ||||||| |||| ||||| Sbjct: 451 ctcaagctcaacggtggtctcggtacctccatgggctgcgtcggccccaagtccgtcat 509
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Minus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||||| || ||||||| | ||||||| Sbjct: 28875616 cgccgccgtcgccgccaacgccgagatcgaggacctccgc 28875577 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcc 150 ||||||||||||||||||||| Sbjct: 31628146 gctgccgccgccgtcgccgcc 31628166 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcc 150 ||||||||||||||||||||| Sbjct: 5506949 gctgccgccgccgtcgccgcc 5506969 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gcaccaccatgggctgcacc 426 |||||||||||||||||||| Sbjct: 35308378 gcaccaccatgggctgcacc 35308359 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 gctgccgccgccgtcgccgccaac 153 ||||||||||||| |||||||||| Sbjct: 33210560 gctgccgccgccgccgccgccaac 33210537 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggctgccgccgccgtcgccg 148 |||||||||||||||||||| Sbjct: 28826426 ggctgccgccgccgtcgccg 28826407
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 50.1 bits (25), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Minus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||||| || ||||||| | ||||||| Sbjct: 93659 cgccgccgtcgccgccaacgccgagatcgaggacctccgc 93620 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggctgccgccgccgtcgccg 148 |||||||||||||||||||| Sbjct: 44469 ggctgccgccgccgtcgccg 44450
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacaccg 29 ||||||||||||||||||||||||| Sbjct: 90374 cacacacccacaccacaccacaccg 90350
>dbj|AK104701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C09, full insert sequence Length = 1361 Score = 50.1 bits (25), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||||| || ||||||| | ||||||| Sbjct: 596 cgccgccgtcgccgccaacgccgagatcgaggacctccgc 635
>dbj|AK067215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098I22, full insert sequence Length = 1441 Score = 50.1 bits (25), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgc 174 ||||||||||||||||||| || ||||||| | ||||||| Sbjct: 597 cgccgccgtcgccgccaacgccgagatcgaggacctccgc 636
>ref|XM_756638.1| Ustilago maydis 521 hypothetical protein (UM05584.1) partial mRNA Length = 1530 Score = 48.1 bits (24), Expect = 0.027 Identities = 41/47 (87%) Strand = Plus / Plus Query: 382 gtgctcangctcaacggaggcctcggcaccaccatgggctgcaccgg 428 ||||||| ||||||||| || || || ||||||||||| |||||||| Sbjct: 352 gtgctcaagctcaacggtggtcttggtaccaccatgggttgcaccgg 398
>emb|CR729310.2|CNS0GPOK Tetraodon nigroviridis full-length cDNA Length = 1196 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 431 tcaagctcaacggcggcctgggcaccagcatgggctgca 469
>emb|CR729039.1|CNS0GPH1 Tetraodon nigroviridis full-length cDNA Length = 1797 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 417 tcaagctcaacggcggcctgggcaccagcatgggctgca 455
>emb|CR727753.1|CNS0GOHB Tetraodon nigroviridis full-length cDNA Length = 1700 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 432 tcaagctcaacggcggcctgggcaccagcatgggctgca 470
>emb|CR727554.2|CNS0GOBS Tetraodon nigroviridis full-length cDNA Length = 1821 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 417 tcaagctcaacggcggcctgggcaccagcatgggctgca 455
>emb|CR705229.2|CNS0G73T Tetraodon nigroviridis full-length cDNA Length = 919 Score = 48.1 bits (24), Expect = 0.027 Identities = 44/51 (86%) Strand = Plus / Plus Query: 374 agctcgtggtgctcangctcaacggaggcctcggcaccaccatgggctgca 424 |||| |||||| | | ||| ||||||||||| ||||||| ||||||||||| Sbjct: 467 agctggtggtggtgaagctgaacggaggcctgggcaccagcatgggctgca 517
>emb|CR692385.2|CNS0FX71 Tetraodon nigroviridis full-length cDNA Length = 1818 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 424 tcaagctcaacggcggcctgggcaccagcatgggctgca 462
>emb|CR680214.2|CNS0FNSY Tetraodon nigroviridis full-length cDNA Length = 1562 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 502 tcaagctcaacggcggcctgggcaccagcatgggctgca 540
>emb|CR676467.2|CNS0FKXB Tetraodon nigroviridis full-length cDNA Length = 1934 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 531 tcaagctcaacggcggcctgggcaccagcatgggctgca 569
>emb|CR668088.2|CNS0FEGU Tetraodon nigroviridis full-length cDNA Length = 1498 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 439 tcaagctcaacggcggcctgggcaccagcatgggctgca 477
>emb|CR663147.2|CNS0FANL Tetraodon nigroviridis full-length cDNA Length = 1955 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 547 tcaagctcaacggcggcctgggcaccagcatgggctgca 585
>emb|CR651069.2|CNS0F1C3 Tetraodon nigroviridis full-length cDNA Length = 1685 Score = 48.1 bits (24), Expect = 0.027 Identities = 35/39 (89%) Strand = Plus / Plus Query: 386 tcangctcaacggaggcctcggcaccaccatgggctgca 424 ||| ||||||||| ||||| ||||||| ||||||||||| Sbjct: 409 tcaagctcaacggcggcctgggcaccagcatgggctgca 447
>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence Length = 316613 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 cacacacccacaccacaccacacc 28 |||||||||||||||||||||||| Sbjct: 49 cacacacccacaccacaccacacc 72 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cacacacacccacaccacacc 23 ||||||||||||||||||||| Sbjct: 269 cacacacacccacaccacacc 289
>emb|AL669825.10| Mouse DNA sequence from clone RP23-327K3 on chromosome 11 Contains a cyclic AMP phosphoprotein (Arpp19) pseudogene, a heat shock protein (Hsp) pseudogene and a ribosomal protein S6 (Rps6) pseudogene, complete sequence Length = 199649 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1 atcacacacacccacaccacaccacacc 28 ||||||||||| |||||||||||||||| Sbjct: 74026 atcacacacacacacaccacaccacacc 73999 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 74093 cacacacacacacaccacaccacacc 74068
>gb|AF371410.1|AF371410 Saccharomyces cerevisiae clone pktel170 telomeric sequence Length = 185 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacacc 28 |||||||||||||||||||||||| Sbjct: 150 cacacacccacaccacaccacacc 127
>gb|M12922.1|YSCARSX Yeast (S.cerevisiae) chromosome III L terminal region DNA Length = 1546 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 cacacacccacaccacaccacacc 28 |||||||||||||||||||||||| Sbjct: 49 cacacacccacaccacaccacacc 72 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cacacacacccacaccacacc 23 ||||||||||||||||||||| Sbjct: 269 cacacacacccacaccacacc 289
>ref|NM_121737.2| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.2 mRNA, complete cds Length = 1798 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 196 gagatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggc 255 ||||| |||||||| |||||| || ||||||| |||||| || || |||||||| || Sbjct: 138 gagatgagcgagaatgagaagagtggattcatcaacctcgtttcacgttacctcagtggt 197 Query: 256 gaggcggagcaaatcgagtggagcaagatccagac 290 || || |||| || || ||||||||||||||||| Sbjct: 198 gaagcccagcacattgaatggagcaagatccagac 232
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 cacacacccacaccacaccacac 27 ||||||||||||||||||||||| Sbjct: 118797 cacacacccacaccacaccacac 118819
>gb|AC125457.3| Mus musculus BAC clone RP24-195A4 from chromosome X, complete sequence Length = 127812 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 tcacacacacccacaccacaccacacc 28 |||||||||| |||||||||||||||| Sbjct: 99305 tcacacacacacacaccacaccacacc 99331
>gb|AC124525.3| Mus musculus BAC clone RP23-406I17 from chromosome 2, complete sequence Length = 173181 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacaccg 29 ||||||||| ||||||||||||||||| Sbjct: 127634 cacacacacacacaccacaccacaccg 127660
>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence Length = 157928 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||| ||||| Sbjct: 42411 cacacacacacacaccacaccacacagcaac 42441
>emb|AL133466.22| Human DNA sequence from clone RP5-831C21 on chromosome 20 Contains the GGTLA4 gene for gamma-glutamyltransferase-like activity 4, the 5' end of a novel protein similar to gamma-glutamyl transpeptidase-related protein (GGT-Rel) and the POM121L3 gene for POM121 membrane glycoprotein-like 3 (rat), complete sequence Length = 117890 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 tcacacacacccacaccacaccacacc 28 |||||||||| |||||||||||||||| Sbjct: 3962 tcacacacacacacaccacaccacacc 3936
>emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G3 on chromosome 1q42.11-42.3 Contains STSs and GSSs, complete sequence Length = 127639 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 atcacacacacccacaccacaccacac 27 |||||||||||| |||||||||||||| Sbjct: 29808 atcacacacacctacaccacaccacac 29782
>gb|AY040042.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1413 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 196 gagatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggc 255 ||||| |||||||| |||||| || ||||||| |||||| || || |||||||| || Sbjct: 61 gagatgagcgagaatgagaagagtggattcatcaacctcgtttcacgttacctcagtggt 120 Query: 256 gaggcggagcaaatcgagtggagcaagatccagac 290 || || |||| || || ||||||||||||||||| Sbjct: 121 gaagcccagcacattgaatggagcaagatccagac 155
>gb|AF360244.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1628 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 196 gagatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggc 255 ||||| |||||||| |||||| || ||||||| |||||| || || |||||||| || Sbjct: 138 gagatgagcgagaatgagaagagtggattcatcaacctcgtttcacgttacctcagtggt 197 Query: 256 gaggcggagcaaatcgagtggagcaagatccagac 290 || || |||| || || ||||||||||||||||| Sbjct: 198 gaagcccagcacattgaatggagcaagatccagac 232
>gb|AF361816.1| Arabidopsis thaliana AT5g17310/MKP11_16 mRNA, complete cds Length = 1800 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 196 gagatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggc 255 ||||| |||||||| |||||| || ||||||| |||||| || || |||||||| || Sbjct: 139 gagatgagcgagaatgagaagagtggattcatcaacctcgtttcacgttacctcagtggt 198 Query: 256 gaggcggagcaaatcgagtggagcaagatccagac 290 || || |||| || || ||||||||||||||||| Sbjct: 199 gaagcccagcacattgaatggagcaagatccagac 233
>gb|AF371397.1|AF371397 Saccharomyces cerevisiae clone pktel63 telomeric sequence Length = 211 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacac 27 ||||||||||||||||||||||| Sbjct: 29 cacacacccacaccacaccacac 7
>emb|BX831255.1|CNS0A26Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1571 Score = 46.1 bits (23), Expect = 0.11 Identities = 77/95 (81%) Strand = Plus / Plus Query: 196 gagatcagcgagaacgagaaggccgggttcatcagcctcgtctcgcgctacctcagcggc 255 ||||| |||||||| |||||| || ||||||| |||||| || || |||||||| || Sbjct: 118 gagatgagcgagaatgagaagagtggattcatcaacctcgtttcacgttacctcagtggt 177 Query: 256 gaggcggagcaaatcgagtggagcaagatccagac 290 || || |||| || || ||||||||||||||||| Sbjct: 178 gaagcccagcacattgaatggagcaagatccagac 212
>gb|AC140402.2| Mus musculus BAC clone RP24-90D2 from 10, complete sequence Length = 237935 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||| ||||| Sbjct: 136558 cacacacacacacaccacaccacacagcaac 136588
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete sequence Length = 186645 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 tcacacacacccacaccacaccacacc 28 |||||||||| |||||||||||||||| Sbjct: 13458 tcacacacacacacaccacaccacacc 13484
>emb|AL844569.4| Mouse DNA sequence from clone RP23-230H3 on chromosome 2, complete sequence Length = 198872 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacaccg 29 ||||||||| ||||||||||||||||| Sbjct: 128644 cacacacacacacaccacaccacaccg 128618
>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence Length = 174365 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 52075 cacacacacacacaccacaccacacc 52050
>gb|AC116136.9| Mus musculus chromosome 5, clone RP23-116G17, complete sequence Length = 212184 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 44423 cacacacacacacaccacaccacacc 44448
>gb|AY693425.1| Drosophila pseudoobscura isolate BP_159_160_C distal Arrowhead inversion breakpoint region Length = 20941 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 acccacaccacaccacaccgca 31 |||||||||||||||||||||| Sbjct: 14704 acccacaccacaccacaccgca 14683
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 147689 cacacacacacacaccacaccacacc 147664
>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence Length = 182073 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 131352 cacacacacacacaccacaccacacc 131377 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccaca 26 ||||||||| |||||||||||||| Sbjct: 145014 cacacacacacacaccacaccaca 144991
>gb|AC161810.10| Mus musculus chromosome 3, clone RP24-363L5, complete sequence Length = 151433 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 50150 cacacacacacacaccacaccacacc 50175 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 50072 cacacacacacacaccacaccacacc 50097
>gb|AC163210.4| Mus musculus chromosome 7, clone RP24-362L9, complete sequence Length = 161672 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 cacacacacccacaccacacca 24 |||||||||||||||||||||| Sbjct: 44159 cacacacacccacaccacacca 44138
>gb|AC131975.28| Mus musculus chromosome 17, clone RP24-146B4, complete sequence Length = 175318 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 155019 cacacacacacacaccacaccacacc 154994
>gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, complete sequence Length = 167656 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 79056 cacacacacacacaccacaccacacc 79031 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 78983 cacacacacacacaccacaccacac 78959
>gb|AC161597.7| Mus musculus BAC clone RP23-387P23 from chromosome 6, complete sequence Length = 218586 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 164229 cacacacacacacaccacaccacacc 164204
>gb|AC125407.4| Mus musculus BAC clone RP23-94F17 from chromosome 5, complete sequence Length = 233082 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 86552 cacacacacacacaccacaccacacc 86527
>gb|AC166097.5| Mus musculus BAC clone RP24-447P10 from chromosome 9, complete sequence Length = 196951 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 169254 cacacacacacacaccacaccacacc 169279 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 169165 cacacacacacacaccacaccacac 169189 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 169091 cacacacacacacaccacaccacac 169115
>gb|AC169501.2| Mus musculus BAC clone RP24-445O18 from chromosome 17, complete sequence Length = 202078 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 122650 cacacacacacacaccacaccacacc 122625
>ref|XM_469802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1005 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 135 ggctgccgccgccgtcgccgcc 156
>ref|XM_469801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 135 ggctgccgccgccgtcgccgcc 156
>gb|AC161807.12| Mus musculus chromosome 1, clone RP24-229G16, complete sequence Length = 144324 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 54773 cacacacacacacaccacaccacacc 54798
>gb|AC119874.12| Mus musculus chromosome 8, clone RP24-289B21, complete sequence Length = 170702 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 15295 cacacacacacacaccacaccacacc 15320
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence Length = 199827 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 122081 cacacacacacacaccacaccacacc 122056
>gb|AC161181.3| Mus musculus chromosome 3, clone RP23-10I23, complete sequence Length = 218083 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 162637 cacacacacacacaccacaccacacc 162662
>gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, complete sequence Length = 191438 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 57632 cacacacacacacaccacaccacacc 57657
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 41773 cacacacacacacaccacaccacacc 41798
>gb|AC154144.9| Mus musculus chromosome 1, clone RP24-289K8, complete sequence Length = 158556 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 64537 cacacacacacacaccacaccacacc 64562
>gb|AC160334.2| Mus musculus BAC clone RP23-37D14 from chromosome 9, complete sequence Length = 180527 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 150189 cacacacacacacaccacaccacacc 150214 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 149969 cacacacacacacaccacaccacac 149993
>gb|AC159313.3| Mus musculus BAC clone RP23-99D11 from chromosome 9, complete sequence Length = 228299 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 223974 cacacacacacacaccacaccacacc 223949
>gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence Length = 145113 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 48907 cacacacacacacaccacaccacacc 48932 Score = 40.1 bits (20), Expect = 6.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 3 cacacacac-ccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||||| |||| Sbjct: 48911 cacacacacaccacaccacaccacaccacaac 48942
>gb|AC159614.7| Mus musculus chromosome 1, clone RP24-305O23, complete sequence Length = 156924 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 92620 cacacacacacacaccacaccacacc 92645
>gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, complete sequence Length = 180965 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 5954 cacacacacacacaccacaccacacc 5979 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccaca 26 ||||||||| |||||||||||||| Sbjct: 19616 cacacacacacacaccacaccaca 19593
>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence Length = 171125 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 46759 cacacacacacacaccacaccacacc 46784
>gb|AC122253.5| Mus musculus BAC clone RP23-171K3 from chromosome 17, complete sequence Length = 197161 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 63983 cacacacacacacaccacaccacacc 64008
>gb|AC133507.4| Mus musculus BAC clone RP24-112C17 from chromosome 13, complete sequence Length = 187080 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 91317 cacacacacacacaccacaccacacc 91342
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence Length = 195506 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 52226 cacacacacacacaccacaccacacc 52251
>gb|BC019212.1| Mus musculus serum amyloid A 4, mRNA (cDNA clone MGC:29122 IMAGE:5053373), complete cds Length = 2103 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 1528 cacacacacacacaccacaccacacc 1553
>gb|AC100212.8| Mus musculus chromosome 18, clone RP23-60D22, complete sequence Length = 225698 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 35756 cacacacacacacaccacaccacacc 35731 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacacc 28 ||||||| |||||||||||||||| Sbjct: 35808 cacacacacacaccacaccacacc 35785
>gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, complete sequence Length = 214580 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 197302 cacacacacacacaccacaccacacc 197277
>gb|AC069541.5| Homo sapiens chromosome 10 clone RP11-389O2, complete sequence Length = 158568 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 34290 cacacacacacacaccacaccacacc 34315
>gb|AC132134.2| Mus musculus BAC clone RP23-267P6 from chromosome 5, complete sequence Length = 227078 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 197099 cacacacacacacaccacaccacacc 197074
>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence Length = 181004 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 46440 cacacacacacacaccacaccacacc 46465
>ref|NM_011316.2| Mus musculus serum amyloid A 4 (Saa4), mRNA Length = 2103 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 1528 cacacacacacacaccacaccacacc 1553
>gb|AC161800.8| Mus musculus chromosome 7, clone RP23-340E19, complete sequence Length = 201173 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 cacacacacccacaccacacca 24 |||||||||||||||||||||| Sbjct: 183853 cacacacacccacaccacacca 183832
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 305450 cacacacacacacaccacaccacacc 305475 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 305412 cacacacacacacaccacaccacacc 305387
>gb|AC022699.11| Mus musculus chromosome 10, clone RP23-107I8, complete sequence Length = 225763 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 93553 cacacacacacacaccacaccacacc 93578
>gb|AY544042.1| Salmo salar clone Rsa459 microsatellite sequence Length = 476 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 407 cacacacacacacaccacaccacacc 382
>gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196622 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 190325 cacacacacacacaccacaccacacc 190350
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 30830760 ggctgccgccgccgtcgccgcc 30830781 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 27580703 cacacacacacacaccacaccacacc 27580678 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggctgccgccgccgtcgccg 148 |||||||||||||||||||| Sbjct: 23280412 ggctgccgccgccgtcgccg 23280393
>gb|AC163393.6| Mus musculus chromosome 15, clone RP24-224P8, complete sequence Length = 167152 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 162017 cacacacacacacaccacaccacacc 161992
>gb|AC153007.4| Mus musculus BAC clone RP24-266E2 from chromosome 8, complete sequence Length = 174101 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 173698 cacacacacacacaccacaccacacc 173723
>gb|AC166995.2| Mus musculus BAC clone RP23-255N15 from chromosome 16, complete sequence Length = 170106 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 137676 cacacacacacacaccacaccacacc 137701
>gb|AC133910.6| Mus musculus chromosome 14, clone RP24-484F23, complete sequence Length = 235453 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 68591 cacacacacacacaccacaccacacc 68566
>gb|AC137742.3| Mus musculus BAC clone RP24-345F6 from chromosome 16, complete sequence Length = 170248 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 66278 cacacacacacacaccacaccacacc 66253
>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence Length = 213163 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 128818 cacacacacacacaccacaccacacc 128843
>gb|AC103355.9| Mus musculus chromosome 14, clone RP24-482C10, complete sequence Length = 192348 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 17765 cacacacacacacaccacaccacacc 17740 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacacc 28 ||||||| |||||||||||||||| Sbjct: 17645 cacacacacacaccacaccacacc 17622
>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete sequence Length = 174558 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 124078 cacacacacacacaccacaccacacc 124053
>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence Length = 184869 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 85675 cacacacacacacaccacaccacacc 85650 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 acacacacccacaccacaccacac 27 |||||||| ||||||||||||||| Sbjct: 20722 acacacacacacaccacaccacac 20745
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 198774 cacacacacacacaccacaccacacc 198799
>emb|CT010581.10| Mouse DNA sequence from clone RP23-104J14 on chromosome 16, complete sequence Length = 218225 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 184048 cacacacacacacaccacaccacacc 184073
>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete sequence Length = 229220 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 52296 cacacacacacacaccacaccacacc 52271
>gb|AC113470.14| Mus musculus chromosome 9, clone RP23-262N17, complete sequence Length = 202838 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 112389 cacacacacacacaccacaccacacc 112364
>emb|CR847534.13| Zebrafish DNA sequence from clone DKEY-27E20 in linkage group 3, complete sequence Length = 211145 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 tcacacacacccacaccacaccacac 27 |||||||||| ||||||||||||||| Sbjct: 23140 tcacacacacacacaccacaccacac 23115
>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence Length = 205900 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 10320 cacacacacacacaccacaccacacc 10295
>gb|AC127561.4| Mus musculus BAC clone RP24-273G7 from chromosome 5, complete sequence Length = 202290 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 130940 cacacacacacacaccacaccacacc 130965
>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence Length = 186858 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 77086 cacacacacacacaccacaccacacc 77061
>gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome 16, complete sequence Length = 172980 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 45178 cacacacacacacaccacaccacacc 45203
>emb|AJ251050.1|AFA251050 Avena fatua mRNA for VIP1 protein (vip1 gene) Length = 1061 Score = 44.1 bits (22), Expect = 0.42 Identities = 36/41 (87%) Strand = Plus / Plus Query: 135 cgccgccgtcgccgccaactccnagatcgacggcctccgcg 175 |||| |||||||||||||| || ||||||| | |||||||| Sbjct: 171 cgccaccgtcgccgccaacgccgagatcgaggacctccgcg 211
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 197526 cacacacacacacaccacaccacacc 197551 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 197768 cacacacacacacaccacaccacac 197792 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 197603 cacacacacacacaccacaccacac 197627 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 197563 cacacacacacacaccacaccacac 197587
>gb|AC122199.4| Mus musculus BAC clone RP23-57C9 from chromosome 8, complete sequence Length = 202975 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 190627 cacacacacacacaccacaccacacc 190652
>gb|AC115293.5| Mus musculus BAC clone RP23-92N2 from chromosome 5, complete sequence Length = 239951 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 210850 cacacacacacacaccacaccacacc 210875 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 210777 cacacacacacacaccacaccacacc 210802 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 210741 cacacacacacacaccacaccacac 210765 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 210687 cacacacacacacaccacaccacac 210711
>gb|AC140436.3| Mus musculus BAC clone RP23-85O2 from chromosome 9, complete sequence Length = 142560 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 135761 cacacacacacacaccacaccacacc 135736
>gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosome 17, complete sequence Length = 198838 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 35543 cacacacacacacaccacaccacacc 35518
>gb|AC109247.14| Mus musculus chromosome 9, clone RP23-462C14, complete sequence Length = 225020 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 94613 cacacacacacacaccacaccacacc 94588
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 44.1 bits (22), Expect = 0.42 Identities = 43/50 (86%) Strand = Plus / Plus Query: 271 gagtggagcaagatccagacccccaccgatgaggtcgtggtgccctacga 320 |||||||| ||||||||||| || |||||||| |||| || |||||||| Sbjct: 27279 gagtggagtaagatccagactcctaccgatgaaatcgttgttccctacga 27328
>gb|AC123033.4| Mus musculus BAC clone RP24-482F14 from chromosome 5, complete sequence Length = 180745 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 57342 cacacacacacacaccacaccacacc 57317
>gb|AC124352.2| Mus musculus BAC clone RP24-477C23 from chromosome 9, complete sequence Length = 177886 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 171380 cacacacacacacaccacaccacacc 171355
>gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome 12, complete sequence Length = 175788 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 38507 cacacacacacacaccacaccacacc 38482 Score = 40.1 bits (20), Expect = 6.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 3 cacacacac-ccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||||| |||| Sbjct: 38503 cacacacacaccacaccacaccacaccacaac 38472
>gb|AC125518.3| Mus musculus BAC clone RP24-267E6 from chromosome 1, complete sequence Length = 174190 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 54484 cacacacacacacaccacaccacacc 54509
>gb|AC124485.3| Mus musculus BAC clone RP23-450J12 from chromosome 8, complete sequence Length = 198254 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 155666 cacacacacacacaccacaccacacc 155691
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 62294 cacacacacacacaccacaccacacc 62319
>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence Length = 165496 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 44686 cacacacacacacaccacaccacacc 44711
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence Length = 207475 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 176781 cacacacacacacaccacaccacacc 176756
>gb|AC127282.3| Mus musculus BAC clone RP23-318O24 from chromosome 5, complete sequence Length = 222651 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 21528 cacacacacacacaccacaccacacc 21553
>gb|AC122865.3| Mus musculus BAC clone RP23-143B2 from 8, complete sequence Length = 201139 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 173013 cacacacacacacaccacaccacacc 172988
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 58203 cacacacacacacaccacaccacacc 58178
>gb|AC124199.3| Mus musculus BAC clone RP23-312B17 from 8, complete sequence Length = 157393 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 57589 cacacacacacacaccacaccacacc 57564
>gb|AC103606.16| Mus musculus chromosome 18, clone RP23-336E5, complete sequence Length = 200267 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 121161 cacacacacacacaccacaccacacc 121136
>gb|AC122857.2| Mus musculus BAC clone RP23-125A8 from 2, complete sequence Length = 221951 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 75701 cacacacacacacaccacaccacacc 75726
>gb|AC115304.3| Mus musculus BAC clone RP24-156K1 from 15, complete sequence Length = 144026 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 tcacacacacccacaccacaccacac 27 |||||||||| ||||||||||||||| Sbjct: 35209 tcacacacacacacaccacaccacac 35184 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 35075 cacacacacacacaccacaccacac 35051
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 203121 cacacacacacacaccacaccacacc 203096
>gb|AC098735.4| Mus musculus BAC clone RP23-121P5 from 16, complete sequence Length = 189844 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 127081 cacacacacacacaccacaccacacc 127106
>gb|BC059025.1| Mus musculus RIKEN cDNA 2810011L19 gene, mRNA (cDNA clone IMAGE:6810678), partial cds Length = 3306 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 2989 cacacacacacacaccacaccacacc 3014 Score = 40.1 bits (20), Expect = 6.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 3 cacacacac-ccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||||| |||| Sbjct: 2993 cacacacacaccacaccacaccacaccacaac 3024
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 112330 ggctgccgccgccgtcgccgcc 112309
>gb|AC004941.2| Homo sapiens PAC clone RP5-979P20 from 7, complete sequence Length = 122759 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 80651 cacacacacacacaccacaccacacc 80676
>gb|AC107775.9| Mus musculus chromosome 15, clone RP23-93N2, complete sequence Length = 169604 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 103622 cacacacacacacaccacaccacacc 103647
>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence Length = 227330 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 73747 cacacacacacacaccacaccacacc 73772 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 28589 cacacacacacacaccacaccacac 28613
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 22266 cacacacacacacaccacaccacacc 22291
>gb|AC102040.16| Mus musculus chromosome 18, clone RP23-273B8, complete sequence Length = 250880 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 199379 cacacacacacacaccacaccacacc 199404
>gb|AC111145.7| Mus musculus chromosome 1, clone RP23-373L1, complete sequence Length = 165789 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 109070 cacacacacacacaccacaccacacc 109045
>gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome 16, complete sequence Length = 240181 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 207405 cacacacacacacaccacaccacacc 207380
>gb|AC158235.3| Mus musculus BAC clone RP23-185P17 from chromosome 16, complete sequence Length = 198822 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 111807 cacacacacacacaccacaccacacc 111782
>gb|AC156162.2| Mus musculus BAC clone RP24-342A17 from chromosome 9, complete sequence Length = 141189 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 71796 cacacacacacacaccacaccacacc 71771
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence Length = 191274 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 56161 cacacacacacacaccacaccacacc 56186
>emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 on chromosome 1p35.1-36.12 Contains the 5' end of a novel gene, the gene for a novel protein (KIAA0601), a novel gene and the 5' end of the LUZP1 gene for leucine zipper protein 1, complete sequence Length = 100951 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||||||| |||||||||||| Sbjct: 49177 cacacacacccaccccacaccacacc 49202
>gb|BC014091.2| Homo sapiens family with sequence similarity 109, member A, mRNA (cDNA clone IMAGE:4328993), complete cds Length = 1452 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 80 gctgccgccgccgtcgccgcca 101
>gb|BC034809.1| Homo sapiens family with sequence similarity 109, member A, mRNA (cDNA clone MGC:34643 IMAGE:4943538), complete cds Length = 3054 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 7 gctgccgccgccgtcgccgcca 28
>gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map 7, complete sequence Length = 212485 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 70266 cacacacacacacaccacaccacacc 70291
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 142449 cacacacacacacaccacaccacacc 142474
>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence Length = 185185 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 143631 cacacacacacacaccacaccacacc 143656
>gb|AC091752.2| Rattus norvegicus strain Brown Norway clone RP31-202M22, complete sequence Length = 109982 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 18896 cacacacacacacaccacaccacacc 18871 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cacacacccacaccacaccacacc 28 ||||||| |||||||||||||||| Sbjct: 18745 cacacacacacaccacaccacacc 18722
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 20481 cacacacacacacaccacaccacacc 20506
>gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, complete sequence Length = 161314 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 14293 cacacacacacacaccacaccacacc 14268
>gb|AC160535.3| Mus musculus chromosome 7, clone RP24-298A23, complete sequence Length = 163688 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 27220 cacacacacacacaccacaccacacc 27245
>gb|AC091772.5| Homo sapiens chromosome 10 clone RP11-257L6, complete sequence Length = 158559 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 124279 cacacacacacacaccacaccacacc 124254
>emb|Z46921.1|SC9402 S.cerevisiae chromosome IX cosmid 9402 and left telomere Length = 38990 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cacacccacaccacaccacacc 28 |||||||||||||||||||||| Sbjct: 10 cacacccacaccacaccacacc 31
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 67330 cacacacacacacaccacaccacacc 67305
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 32872 cacacacacacacaccacaccacacc 32897
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence Length = 226160 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 218134 cacacacacacacaccacaccacacc 218159
>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176428 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 32583 cacacacacacacaccacaccacacc 32608
>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence Length = 215002 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 171043 cacacacacacacaccacaccacacc 171018 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 171206 cacacacacacacaccacaccacac 171182 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 171132 cacacacacacacaccacaccacac 171108
>gb|AC154397.8| Mus musculus chromosome 7, clone RP23-53N23, complete sequence Length = 273314 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 227302 cacacacacacacaccacaccacacc 227327
>emb|AL603845.11| Mouse DNA sequence from clone RP23-145C12 on chromosome 11 Contains a ribosomal protein L7a (Rpl7a) pseudogene and the 3' end of the gene for a novel protein similar to Tensin Tns, complete sequence Length = 223491 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 157969 cacacacacacacaccacaccacacc 157994
>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete sequence Length = 167058 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 84384 cacacacacacacaccacaccacacc 84359
>emb|AL954830.7| Mouse DNA sequence from clone RP23-12A10 on chromosome 11 Contains the 3' end of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 109889 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 104771 cacacacacacacaccacaccacacc 104746
>emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chromosome 1 Contains a cytochrome c oxidase subunit Vb (Cox5b) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the 5' end of the Nrp2 gene for neuropilin 2, the 3' end of the gene for an ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and two CpG islands, complete sequence Length = 218427 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 78812 cacacacacacacaccacaccacacc 78837
>emb|AL662875.14| Mouse DNA sequence from clone RP23-67E18 on chromosome 11 Contains the 3' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik), the Ugalt2 gene for UDP-galactose translocator 2, the Spop gene for speckle-type POZ protein, the Nxph3 gene for neurexophilin 3, the Ngfr gene for nerve growth factor receptor (TNFR superfamily, member 16), the 5' end of a novel gene and a CpG island, complete sequence Length = 255199 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 11517 cacacacacacacaccacaccacacc 11492
>emb|AL662841.10| Mouse DNA sequence from clone RP23-31O3 on chromosome 11 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 109589 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 101819 cacacacacacacaccacaccacacc 101794 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccaca 26 ||||||||| |||||||||||||| Sbjct: 101851 cacacacacacacaccacaccaca 101828 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccaca 26 ||||||||| |||||||||||||| Sbjct: 101742 cacacacacacacaccacaccaca 101719
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete sequence Length = 155196 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 49724 cacacacacacacaccacaccacacc 49749
>emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chromosome 2, complete sequence Length = 164324 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 87585 cacacacacacacaccacaccacacc 87610
>gb|AC102287.16| Mus musculus chromosome 8, clone RP24-345M16, complete sequence Length = 179888 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 129655 cacacacacacacaccacaccacacc 129680
>gb|AC163642.3| Mus musculus BAC clone RP24-456N17 from chromosome 5, complete sequence Length = 204856 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 71184 cacacacacacacaccacaccacacc 71159 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 71111 cacacacacacacaccacaccacacc 71086 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 71274 cacacacacacacaccacaccacac 71250 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 71220 cacacacacacacaccacaccacac 71196
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 128 tggctgccgccgccgtcgccgccaac 153 |||||||||||||||||| ||||||| Sbjct: 3228438 tggctgccgccgccgtcggcgccaac 3228463
>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete sequence Length = 172605 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cacacccacaccacaccacacc 28 |||||||||||||||||||||| Sbjct: 94553 cacacccacaccacaccacacc 94574
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 32025 cacacacacacacaccacaccacacc 32050
>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence Length = 219005 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 107889 cacacacacacacaccacaccacacc 107864
>gb|AC120734.5| Rattus norvegicus BAC CH230-220D1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 232990 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 99565 cacacacacacacaccacaccacacc 99590
>gb|AC096630.16| Pan troglodytes clone rp43-71g16, complete sequence Length = 160603 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 29151 cacacacacacacaccacaccacacc 29126
>dbj|AK056918.1| Homo sapiens cDNA FLJ32356 fis, clone PROST2007974, weakly similar to ANTER-SPECIFIC PROLINE-RICH PROTEIN APG Length = 2524 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 42 gctgccgccgccgtcgccgcca 63
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 8749 ggctgccgccgccgtcgccgcc 8770
>gb|DQ360291.1| Mus musculus strain SJL/J C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 144780 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 142994 cacacacacacacaccacaccacacc 143019
>gb|AF371406.1|AF371406 Saccharomyces cerevisiae clone pktel175 telomeric sequence Length = 243 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 cacacccacaccacaccacacc 28 |||||||||||||||||||||| Sbjct: 184 cacacccacaccacaccacacc 163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cacacccacaccacaccaca 26 |||||||||||||||||||| Sbjct: 55 cacacccacaccacaccaca 36
>gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosome 13, complete sequence Length = 162744 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 92218 cacacacacacacaccacaccacacc 92243
>gb|AC111139.19| Mus musculus chromosome 3, clone RP23-365L12, complete sequence Length = 188633 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 116975 cacacacacacacaccacaccacacc 117000 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 116859 cacacacacacacaccacaccacacc 116884 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 116776 cacacacacacacaccacaccacacc 116801 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 116558 cacacacacacacaccacaccacacc 116583 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 116742 cacacacacacacaccacaccacac 116766 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 116720 cacacacacacacaccacaccacac 116744 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 116585 cacacacacacacaccacaccacac 116609
>ref|NM_008614.2| Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 1, mRNA Length = 3286 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 2806 cacacacacacacaccacaccacacc 2831
>gb|AC154263.2| Mus musculus BAC clone RP24-308C1 from chromosome 14, complete sequence Length = 196901 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 65668 cacacacacacacaccacaccacacc 65643
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence Length = 230889 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 32159 cacacacacacacaccacaccacacc 32184
>gb|BC018996.2| Homo sapiens family with sequence similarity 109, member A, mRNA (cDNA clone IMAGE:4300218) Length = 1452 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 80 gctgccgccgccgtcgccgcca 101
>gb|AC159320.3| Mus musculus BAC clone RP23-51A12 from chromosome 14, complete sequence Length = 255936 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 244259 cacacacacacacaccacaccacacc 244234
>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15, complete sequence Length = 200989 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cacacccacaccacaccacacc 28 |||||||||||||||||||||| Sbjct: 143391 cacacccacaccacaccacacc 143412
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence Length = 180258 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 109028 cacacacacacacaccacaccacacc 109053
>gb|AC121565.4| Mus musculus BAC clone RP23-223J11 from chromosome 6, complete sequence Length = 170000 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 158290 cacacacacacacaccacaccacacc 158315
>gb|AC132390.4| Mus musculus BAC clone RP23-453P1 from chromosome 8, complete sequence Length = 200323 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 158206 cacacacacacacaccacaccacacc 158181
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 210564 cacacacacacacaccacaccacacc 210539
>gb|AC154409.2| Mus musculus BAC clone RP24-259B4 from chromosome 14, complete sequence Length = 196997 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 23049 cacacacacacacaccacaccacacc 23074
>gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190365 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 122692 cacacacacacacaccacaccacacc 122667
>dbj|AK045952.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230326M03 product:unclassifiable, full insert sequence Length = 2878 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 2587 cacacacacacacaccacaccacacc 2612 Score = 40.1 bits (20), Expect = 6.6 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 3 cacacacac-ccacaccacaccacaccgcaac 33 ||||||||| ||||||||||||||||| |||| Sbjct: 2591 cacacacacaccacaccacaccacaccacaac 2622
>dbj|AK028057.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500035N02 product:myelin-associated oligodendrocytic basic protein, full insert sequence Length = 3286 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 2806 cacacacacacacaccacaccacacc 2831
>ref|NM_144671.2| Homo sapiens family with sequence similarity 109, member A (FAM109A), mRNA Length = 3054 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 7 gctgccgccgccgtcgccgcca 28
>gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, complete sequence Length = 127112 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 82025 cacacacacacacaccacaccacacc 82050 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 81934 cacacacacacacaccacaccacac 81958
>emb|BX248388.8| Zebrafish DNA sequence from clone CH211-239E16 in linkage group 16, complete sequence Length = 58638 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 25129 cacacacacacacaccacaccacacc 25154 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 24917 cacacacacacacaccacaccacac 24941
>gb|AC111051.26| Mus musculus chromosome 7, clone RP24-163C20, complete sequence Length = 166456 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 83335 cacacacacacacaccacaccacacc 83360
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 ggctgccgccgccgtcgccgcc 150 |||||||||||||||||||||| Sbjct: 30921283 ggctgccgccgccgtcgccgcc 30921304 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 27672026 cacacacacacacaccacaccacacc 27672001 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggctgccgccgccgtcgccg 148 |||||||||||||||||||| Sbjct: 23273440 ggctgccgccgccgtcgccg 23273421
>gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 113064 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 130 gctgccgccgccgtcgccgcca 151 |||||||||||||||||||||| Sbjct: 62200 gctgccgccgccgtcgccgcca 62179
>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 227508 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 189677 cacacacacacacaccacaccacacc 189702
>gb|AC154831.2| Mus musculus BAC clone RP24-556A11 from chromosome 12, complete sequence Length = 199712 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 68345 cacacacacacacaccacaccacacc 68320
>gb|AC156497.2| Mus musculus BAC clone RP24-351K2 from chromosome 9, complete sequence Length = 174877 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 72307 cacacacacacacaccacaccacacc 72282
>gb|AC151713.4| Mus musculus BAC clone RP24-100K9 from chromosome 8, complete sequence Length = 199295 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 67879 cacacacacacacaccacaccacacc 67854
>gb|AC109219.13| Mus musculus chromosome 1, clone RP23-429I18, complete sequence Length = 204942 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 172698 cacacacacacacaccacaccacacc 172673 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 172621 cacacacacacacaccacaccacacc 172596 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 172759 cacacacacacacaccacaccacac 172735
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 33590 cacacacacacacaccacaccacacc 33565
>gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosome 7, complete sequence Length = 208516 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 77680 cacacacacacacaccacaccacacc 77655
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 22400 cacacacacacacaccacaccacacc 22375
>gb|AC110232.15| Mus musculus chromosome 1, clone RP23-67H24, complete sequence Length = 209668 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 114527 cacacacacacacaccacaccacacc 114552 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 114450 cacacacacacacaccacaccacacc 114475 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 114389 cacacacacacacaccacaccacac 114413
>emb|BX537122.11| Mouse DNA sequence from clone RP24-548L8 on chromosome 4, complete sequence Length = 34689 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 15807 cacacacacacacaccacaccacacc 15782 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 acacacacccacaccacaccacacc 28 |||||||| |||||||||||||||| Sbjct: 15968 acacacacacacaccacaccacacc 15944 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacac 27 ||||||||| ||||||||||||||| Sbjct: 15584 cacacacacacacaccacaccacac 15560
>gb|AF120476.1|AF120475S2 Mus musculus myelin-associated oligodendrocytic basic proteins MOBP73 and MOBP81 (Mobp) gene, exons 6 through 7c and complete cds, alternatively spliced Length = 4865 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 4499 cacacacacacacaccacaccacacc 4524
>emb|AJ536044.1|MMU536044 Mus musculus partial Zfhx1b gene for SIP1 protein and partial ORF1 for hypothetical protein, exons 1-3 Length = 9174 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 7349 cacacacacacacaccacaccacacc 7374
>emb|AL845260.15| Mouse DNA sequence from clone RP23-232J15 on chromosome 2, complete sequence Length = 217328 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 12628 cacacacacacacaccacaccacacc 12603
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 cacacacacccacaccacaccacacc 28 ||||||||| |||||||||||||||| Sbjct: 151142 cacacacacacacaccacaccacacc 151117 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,597,236 Number of Sequences: 3902068 Number of extensions: 2597236 Number of successful extensions: 115078 Number of sequences better than 10.0: 982 Number of HSP's better than 10.0 without gapping: 986 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 108235 Number of HSP's gapped (non-prelim): 6839 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
