Clone Name | bart06e12 |
---|---|
Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 42.4 bits (98), Expect = 5e-04 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 9/119 (7%) Frame = +1 Query: 112 VLAPVTKDAATSLYKIPFHDGTNLV-----LDVAGPLVWSTCDGGQPPPAADIT-CSSPT 273 ++ PV DA+T L+ T L+ +D+ G +W C+ C S Sbjct: 41 LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQ 100 Query: 274 CLLANAYPAAGCPA---PSCGSDRHDKPCTAYPSNPVTGACAAGSLFRARLVANTTDGN 441 C AN + CPA P C H C +NP+T G L + L + T G+ Sbjct: 101 CSRANTHQCLSCPAASRPGC----HKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGS 155
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 41.6 bits (96), Expect = 9e-04 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 9/119 (7%) Frame = +1 Query: 112 VLAPVTKDAATSLYKIPFHDGTNLV-----LDVAGPLVWSTCDGGQPPPAADIT-CSSPT 273 V+ PV D +T L+ T L+ +D+ G +W C+ C S Sbjct: 34 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93 Query: 274 CLLANAYPAAGCPA---PSCGSDRHDKPCTAYPSNPVTGACAAGSLFRARLVANTTDGN 441 C AN + CPA P C H C +NP+T G L L + T G+ Sbjct: 94 CSRANTHQCLSCPAASRPGC----HKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGS 148
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 33.1 bits (74), Expect = 0.31 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = +1 Query: 97 SKALPVLAPVTKDAATSLYKIPFHDGTNLVLDVAGPLVWSTCDGGQPPPAADITCSSPTC 276 S P+LAP++ A + P H + G LV S G +PPP A ++ +P Sbjct: 80 SSPRPILAPLS--TAGEQKRPPPHRSSKPAPTSVGQLVVSAAAGPKPPPVASVSILAPKS 137 Query: 277 LLANAYPAAGCPAPS 321 L A+ P P+ Sbjct: 138 LGQLVISASAMPRPT 152
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 32.7 bits (73), Expect = 0.41 Identities = 23/75 (30%), Positives = 32/75 (42%) Frame = +1 Query: 97 SKALPVLAPVTKDAATSLYKIPFHDGTNLVLDVAGPLVWSTCDGGQPPPAADITCSSPTC 276 S PVLAP++ A + P +N G LV S +PPP A ++ +P Sbjct: 80 SSPRPVLAPLS--IAGEQKRPPPPHSSNRAAKSVGQLVVSAAAASKPPPVASVSILAPKS 137 Query: 277 LLANAYPAAGCPAPS 321 L A+ P PS Sbjct: 138 LGQLVISASAMPRPS 152
>TRI2_STRCO (Q9RKB9) Putative tricorn protease homolog 2 (EC 3.4.21.-)| Length = 1171 Score = 32.0 bits (71), Expect = 0.70 Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 21/114 (18%) Frame = +1 Query: 124 VTKDAATSLYKIPFHDGTNLVLDVAGP-----LVWSTCDGGQPPPAADITCSSPTCLLAN 288 + D A + HDG L+LDVA P L D G PP A D + T A+ Sbjct: 393 LVSDPAGDRLAVASHDGRLLILDVAEPDTEVTLALEAVDAGYPPDAGDEDAAG-TAARAD 451 Query: 289 AYPAAGCPAPSCGSDRHDKPC----------------TAYPSNPVTGACAAGSL 402 + P AP+ +D D T P +P T A A G + Sbjct: 452 SAP----DAPAEDTDARDIAAGTGTGDIADADAAAGGTVTPGSPGTPATAGGQV 501
>GALP_ECOLI (P0AEP1) Galactose-proton symporter (Galactose transporter)| Length = 464 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +1 Query: 196 AGPLVWSTCDGGQPPPAAD--ITCSSPTCLLAN 288 AGPL+W C QP D ITCS+ T +AN Sbjct: 366 AGPLIWVLCSEIQPLKGRDFGITCSTATNWIAN 398
>GALP_ECOL6 (P0AEP2) Galactose-proton symporter (Galactose transporter)| Length = 464 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +1 Query: 196 AGPLVWSTCDGGQPPPAAD--ITCSSPTCLLAN 288 AGPL+W C QP D ITCS+ T +AN Sbjct: 366 AGPLIWVLCSEIQPLKGRDFGITCSTATNWIAN 398
>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein| 1.8) (Keratin-associated protein 1.9) Length = 177 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/45 (28%), Positives = 18/45 (40%) Frame = +1 Query: 238 PPAADITCSSPTCLLANAYPAAGCPAPSCGSDRHDKPCTAYPSNP 372 PP ++C+ PTC + A+ C CG C Y P Sbjct: 131 PPCCVVSCTPPTCCQLHHAEASCCRPSYCGQSCCRPVCCCYSCEP 175
>KRA11_HUMAN (Q07627) Keratin-associated protein 1-1 (Keratin-associated protein| 1.1) (High sulfur keratin-associated protein 1.1) (Keratin-associated protein 1.6) (Keratin-associated protein 1.7) Length = 177 Score = 29.6 bits (65), Expect = 3.5 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = +1 Query: 238 PPAADITCSSPTCLLANAYPAAGCPAPSCGSDRHDKPCTAYPSNP 372 PP ++C+ P+C + A+ C CG C Y S P Sbjct: 131 PPCCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCCCYCSEP 175
>KRB2C_SHEEP (P02440) Keratin, high-sulfur matrix protein, B2C| Length = 151 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +1 Query: 223 DGGQPPPAADITCSSPTCLLANAYPAAGCPAPS-CGSDRHDKPCTAYPS 366 +G PP ++C+SP+C Y A C PS CG C P+ Sbjct: 89 EGTSLPPCCVVSCTSPSCCQL-YYAQASCCRPSYCGQSCCRPACCCQPT 136
>KRB2B_SHEEP (P02439) Keratin, high-sulfur matrix protein, B2B| Length = 156 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +1 Query: 223 DGGQPPPAADITCSSPTCLLANAYPAAGCPAPS-CGSDRHDKPCTAYPS 366 +G PP ++C+SP+C Y A C PS CG C P+ Sbjct: 99 EGTSLPPCCVVSCTSPSCCQL-YYAQASCCRPSYCGQSCCRPACCCQPT 146
>KRB2D_SHEEP (P08131) Keratin, high-sulfur matrix protein, B2D| Length = 181 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +1 Query: 223 DGGQPPPAADITCSSPTCLLANAYPAAGCPAPS-CGSDRHDKPCTAYPS 366 +G PP ++C+SP+C Y A C PS CG C P+ Sbjct: 119 EGTSLPPCCVVSCTSPSCCQL-YYAQASCCRPSYCGQSCCRPACCCQPT 166
>ZPBP2_RAT (Q6X782) Zona pellucida-binding protein 2 precursor| Length = 326 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +1 Query: 220 CDGGQPPPAADITCSSPTCLLANAYPAAGCP 312 C G P D+TC TC+ A+ Y A CP Sbjct: 298 CSPGTFSPDMDVTCQ--TCVSAHVYGAKACP 326
>SP3_MOUSE (O70494) Transcription factor Sp3| Length = 783 Score = 28.9 bits (63), Expect = 5.9 Identities = 22/63 (34%), Positives = 25/63 (39%) Frame = +1 Query: 229 GQPPPAADITCSSPTCLLANAYPAAGCPAPSCGSDRHDKPCTAYPSNPVTGACAAGSLFR 408 G AA T SP LLA G P+P G D + A P A A G L Sbjct: 44 GAAAAAAQDTQPSPLALLAATCSKIGPPSP--GDDDEEAAVAAAAGVPAAAAGATGDLAS 101 Query: 409 ARL 417 A+L Sbjct: 102 AQL 104
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 28.9 bits (63), Expect = 5.9 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 11/96 (11%) Frame = +1 Query: 109 PVLAPVTKDAATSLYKIPFHDGTNLVLDVAGPLVWSTCDGGQPPPAADITCSSPTCLLAN 288 P+ P + AT+ H ++L G LV S G +PPPA + +PT L Sbjct: 88 PLCTPEGQKTATA------HRSSSLAPTSVGQLVMSASAGPKPPPATTGSVLAPTS-LGL 140 Query: 289 AYPAAGCP-----------APSCGSDRHDKPCTAYP 363 PA+ P AP+ + + P + P Sbjct: 141 VMPASAGPRSPPVTLGPNLAPTSRDQKQEPPASVGP 176
>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix| nude) Length = 648 Score = 28.9 bits (63), Expect = 5.9 Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 27/81 (33%) Frame = +1 Query: 235 PPPAADITCSSPTCL-------LANAYPAAGCPAP-------SCGSDRHDKPCTAYPSNP 372 PPP +D+T PT L L A G PAP SC S D P PS P Sbjct: 5 PPPQSDVTLPGPTRLEGERQGDLMQAPGLPGSPAPQSKHAGFSCSSFVSDGPPERTPSLP 64 Query: 373 -------------VTGACAAG 396 V G C AG Sbjct: 65 PHSPRIASPGPEQVQGHCPAG 85
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/56 (25%), Positives = 23/56 (41%) Frame = +1 Query: 232 QPPPAADITCSSPTCLLANAYPAAGCPAPSCGSDRHDKPCTAYPSNPVTGACAAGS 399 +PP A C+ CL P + +P C + PC + ++ T +C S Sbjct: 28 EPPCCAPSCCAPAPCLTLVCTPVSCVSSPCCQAACEPSPCQSGCTSSCTPSCCQQS 83
>TMPS9_RAT (P69526) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserine protease 1) (Polyserase-I) [Contains: Serase-1; Serase-2; Serase-3] Length = 1061 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = -2 Query: 224 SHVDQTSGPATSRTRLVPSWKGIL*REVAASLVTGASTGRALDDACAASVAPRTRRST 51 S T+ P TS TRL+PS AA L+ ASTGR V R +T Sbjct: 739 SDPSSTAHPHTSSTRLIPSQPP---TTTAAGLIPEASTGRPATLRATIRVTTRPLNTT 793
>TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-kappa-B p65| subunit) Length = 558 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/80 (23%), Positives = 28/80 (35%) Frame = +1 Query: 109 PVLAPVTKDAATSLYKIPFHDGTNLVLDVAGPLVWSTCDGGQPPPAADITCSSPTCLLAN 288 P +P + A +L ++ F DG G PPP+ T ++ C L Sbjct: 369 PASSPTPEPLAEALLQLQFDDGVG---------------GSGPPPSTTTTTTTTQCALGG 413 Query: 289 AYPAAGCPAPSCGSDRHDKP 348 P G G+ D P Sbjct: 414 GIPDPGGSPLDLGALLGDPP 433
>TECTA_HUMAN (O75443) Alpha-tectorin precursor| Length = 2155 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Frame = +1 Query: 220 CDGGQPPPAADITCSSPTCLLANAYPAAGC-PAPSCGSDRHD 342 C G P C + TC L N GC P G++ HD Sbjct: 1757 CSGVVEDPCVGADCPNRTCELGNGRELCGCIEPPPYGNNSHD 1798
>LPIN1_MOUSE (Q91ZP3) Lipin-1 (Fatty liver dystrophy protein)| Length = 924 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/46 (28%), Positives = 20/46 (43%) Frame = +1 Query: 235 PPPAADITCSSPTCLLANAYPAAGCPAPSCGSDRHDKPCTAYPSNP 372 P P++ + C LA ++ CP SC + P + PS P Sbjct: 238 PSPSSLVDCQRTPPHLAEGVLSSSCPLQSCHFHASESPSGSRPSTP 283
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = +1 Query: 214 STCDGGQPPPAADITCSSPTCLLANAYPAAGCPAPSCGS 330 S C G P A + C P C A + C CGS Sbjct: 26 SGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGS 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,962,120 Number of Sequences: 219361 Number of extensions: 650678 Number of successful extensions: 2651 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2633 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)