ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06e11 |
|---|---|
| Clone Library Name | barley_pub |
>XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 633 Score = 33.9 bits (76), Expect = 0.20 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +1 Query: 19 KIPKSKPRKLSPARPNNPPIPAESRRP-----PALSLGFGSPASRGRGAD 153 K P P +LSP+ P P +PA +R P PA + G + RG G + Sbjct: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTE 305
>PIV6_ADE40 (P48309) Minor capsid protein 6 precursor (Minor capsid protein VI)| [Contains: Protease cofactor] Length = 267 Score = 33.9 bits (76), Expect = 0.20 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 7/50 (14%) Frame = +1 Query: 28 KSKP--RKLSPARPNNPPIPAES-----RRPPALSLGFGSPASRGRGADW 156 +SKP +L P P PP+PA + RP A ++ +PA R RGA+W Sbjct: 197 ESKPVTLELPPPVPTVPPMPAPTLGTAVSRPTAPTVAVATPARRPRGANW 246
>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4| (WASP-family protein member 4) Length = 625 Score = 33.1 bits (74), Expect = 0.33 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPAS 135 P SKP P P PP P PP +GFGSP + Sbjct: 438 PSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGT 474
>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)| Length = 1157 Score = 33.1 bits (74), Expect = 0.33 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 16 PKIPKSKPRKLSPARPNNPPIPAESRRPPALS 111 P +P + P +P+ P PP+P S PPALS Sbjct: 713 PPVPPAPPALSAPSVPPVPPVPPVSSAPPALS 744
>GAR1_ASHGO (Q757V8) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein| GAR1) Length = 212 Score = 32.3 bits (72), Expect = 0.57 Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = -3 Query: 146 PRPRLAGEPKP-RERAGGRRLSAGMGGLFGRAG 51 P+P++AG PKP R+RA G + G GG GR G Sbjct: 125 PKPKVAGPPKPKRKRAAGG--APGRGGFGGRGG 155
>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] Length = 425 Score = 32.3 bits (72), Expect = 0.57 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +1 Query: 1 TASFLPKIPKSKPRK--LSPARPNNPPIPAESRRPPALSLGFGSPASRGR 144 T+S P +PKS P K + P P++P I + PP G G P S R Sbjct: 200 TSSLYPVLPKSDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGPR 249
>VG48_ICHV1 (Q00112) Hypothetical gene 48 protein| Length = 278 Score = 32.0 bits (71), Expect = 0.74 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPAL---SLGFGSPASRGRGADW 156 P +PR +SP P P P + ++ PAL +L F +PA RG DW Sbjct: 43 PAEQPRAISP-EPVTPKKPKQPKKRPALKQPTLPFAAPAK--RGMDW 86
>DPOL_ADE40 (P48311) DNA polymerase (EC 2.7.7.7)| Length = 1188 Score = 32.0 bits (71), Expect = 0.74 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +1 Query: 1 TASFLPKIPKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASRGRG 147 TA P ++ R+ + A P PP S RPPA + +P SR RG Sbjct: 32 TAGAAPTATRAPRRRAATASPGEPPSTTASGRPPAANNVSLTPNSRLRG 80
>NIFZ_FRAAL (P46040) Protein nifZ| Length = 192 Score = 31.6 bits (70), Expect = 0.97 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +1 Query: 13 LPKIPKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 +P P + +PA+P P PA +P ++G G+P ++ Sbjct: 147 VPSTPAEPAKAATPAKPATPAKPAPPAKPAGKTVGAGTPGAK 188
>GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 536 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 1 TASFLPKIPKSKPRK--LSPARPNNPPIPAESRRPPALSLGFGSPAS 135 T+S P +PK+ P K + P P++P I + PP G G P S Sbjct: 200 TSSLYPVLPKTNPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPS 246
>ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finger protein ATL2)| Length = 304 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = -2 Query: 177 SIAGDPIPIRPAASASGRTET*GESGRAAALGGDGGVVRPCGREFPRLRFGDFGKEAXR 1 ++ DP+ + +S+SG T+ SG + L D G +P E PR F +F E R Sbjct: 184 AVDSDPVLVIEPSSSSGLTDEPHGSGSSQMLREDSG-RKPAAIEVPRRTFSEFEDELTR 241
>GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein| GAR1) Length = 222 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = -3 Query: 146 PRPRLAGEPKPRERAGGRRLSAGMGGL---FGRAGESFLGF 33 P+P++AG PKP+ + AG GG FG G S GF Sbjct: 125 PKPKVAGPPKPKNKKKRSGAPAGRGGARGGFGGRGGSRGGF 165
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPAS 135 P KP P P PP P S PP S+GFGSP + Sbjct: 310 PGPKPGFAPPPAP--PPPPPMSVPPPLPSMGFGSPGT 344
>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 580 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +1 Query: 1 TASFLPKIPKSKPRK--LSPARPNNPPIPAESRRPPALSLGFGSPASRGR 144 T+S P +PK P K + P P++P I + PP G G P S R Sbjct: 197 TSSLYPVVPKPDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGPR 246
>GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] Length = 371 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +1 Query: 1 TASFLPKIPKSKPRK--LSPARPNNPPIPAESRRPPALSLGFGSPASRGR 144 T+S P +PK P K + P P++P I + PP G G P S R Sbjct: 197 TSSLYPVVPKPDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGPR 246
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALS 111 P S P+KL P +P P PA PPA S Sbjct: 295 PTSTPQKLIPPQPTGRPSPAPPAVPPAAS 323
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 30.0 bits (66), Expect = 2.8 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 13 LPKIPKSKPRKLSPARPNNPPIPAESRRP 99 LPK+ S+P PA P P+PA S P Sbjct: 904 LPKLGPSQPVSKPPATPQKQPVPAVSHSP 932
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 P+ PR+ SP R PP P R PP + SP R Sbjct: 243 PRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 P+ PR+ SP R PP P R PP + SP R Sbjct: 243 PRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 P+ PR+ SP R PP P R PP + SP R Sbjct: 243 PRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1| Length = 305 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 P+ PR+ SP R PP P R PP + SP R Sbjct: 243 PRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related| protein LDC2) Length = 305 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 P+ PR+ SP R PP P R PP + SP R Sbjct: 243 PRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRR 280
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPAS 135 P KP P P PP P PP +GFGSP + Sbjct: 310 PGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGT 346
>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC| 2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) Length = 1490 Score = 29.6 bits (65), Expect = 3.7 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 Query: 4 ASFLPKIPKSKPRKLSPARPNNPPIPAESRRPP 102 AS P +P + P +P P PPIPA ++PP Sbjct: 533 ASPPPPLPTTTPPPQTPPLPPLPPIPALPQQPP 565
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +1 Query: 28 KSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASRGRGA 150 K+ PRK +PA+P P PA++ RP A PA+ R A Sbjct: 57 KAAPRKAAPAKP-GAPSPAQAARPAAPRPPAPKPAAAERPA 96
>HEMH_CHICK (O42479) Ferrochelatase, mitochondrial precursor (EC 4.99.1.1)| (Protoheme ferro-lyase) (Heme synthetase) Length = 402 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +2 Query: 131 LAEAAGRIGIGSPAMDWSAVTAEDLVAALREVDWSTPP 244 + E RIG GSP W+AV E +V L + T P Sbjct: 98 IQEQYSRIGGGSPIKKWTAVQGEGMVKLLDSMSPQTAP 135
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 1 TASFLPKIPKSKPRKLSPARPNNPPIPAESRRPPALSLGFGS 126 +A P +P P SPA P PP RPP L+ +GS Sbjct: 649 SALISPPMPAPSP---SPASPLTPPFSPTFSRPPRLASPYGS 687
>CABL2_HUMAN (Q9BTV7) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)| (Ik3-2) Length = 478 Score = 29.3 bits (64), Expect = 4.8 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 Query: 34 KPRKLSPARPNNPPIPAESRRPPA 105 +P L P PP PAE+R PPA Sbjct: 60 RPPSLGPGGEKPPPPPAEAREPPA 83
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 28.9 bits (63), Expect = 6.3 Identities = 16/41 (39%), Positives = 17/41 (41%) Frame = +1 Query: 13 LPKIPKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPAS 135 LP P P P P PP P PP GFG PA+ Sbjct: 699 LPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAA 739
>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)| Length = 383 Score = 28.9 bits (63), Expect = 6.3 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +1 Query: 52 PARPNNPPIPAESRRPPALSLGFGSPASRGRG 147 P P PP P PP +SL GS A G G Sbjct: 172 PPPPPGPPPPPGPPPPPGVSLSGGSAAGHGAG 203
>GAR1_YEAST (P28007) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein| GAR1) Length = 205 Score = 28.9 bits (63), Expect = 6.3 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 12/49 (24%) Frame = -3 Query: 146 PRPRLAGEPKPRER-----AGGRRLSAGMG-----GLF--GRAGESFLG 36 P+P++ G PKP+ + A G R A MG G F GR G SF G Sbjct: 124 PKPKVVGPPKPKNKKKRSGAPGGRGGASMGRGGSRGGFRGGRGGSSFRG 172
>104K_THEAN (Q4U9M9) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 893 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +1 Query: 16 PKIPKSKPRKLSPARPNNPPIPAESRRPPALSLGF 120 PK P S R +SP RP +P P + P + + F Sbjct: 629 PKRPVSPQRPVSPRRPESPKSPKSPKSPKSPKVPF 663 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 13 LPKIPKSKPRKLSPARPNNPPIPAESRRP 99 +PK PK SP RP +P P RRP Sbjct: 616 IPKSPKRPESPKSPKRPVSPQRPVSPRRP 644 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +1 Query: 16 PKIPKSKPRKLSPARPNNPPIPAESRRPPALSL 114 P+ PKS R +SP RP +P P +RP +L + Sbjct: 587 PESPKSPKRPVSPQRPVSPKSP---KRPESLDI 616
>USH_DROME (Q9VPQ6) Zinc-finger protein ush (Protein U-shaped)| Length = 1191 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -3 Query: 143 RPRLAGEPKPRERAGGRRLSAGMGGLFGRAGE 48 RP + P P GG + G+GGL G G+ Sbjct: 1148 RPEASDSPSPNHLGGGVAVGLGIGGLVGGHGQ 1179
>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type| coiled-coil domain protein 1) Length = 970 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +1 Query: 25 PKSKPRKLSPARPNNPPIPAESRRPPAL--SLGFGSPASRGRGA 150 P ++ P RP +PP+PA R P+ SL PAS+ R A Sbjct: 539 PSTEEPVRRPQRPRSPPLPAVIRNAPSRPPSLPTPRPASQPRKA 582
>SH22A_MOUSE (Q9QXK9) SH2 domain protein 2A (Lck-associated adapter protein)| (Lad) (Rlk/Itk-binding protein) (Ribp) Length = 374 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1 Query: 19 KIPKSKPRKLSPARPNNPPIPAESRRPPALSLGFGSPASR 138 K+ S+ + S A PPIPA+ + PP + + SPASR Sbjct: 253 KVWASQQKATSQASRPRPPIPAKPQLPPEV---YTSPASR 289
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 37 PRKLSPARPNNPPIPAESRRPPALSLGFGSPA 132 PR +P RP + P P+ RPP+ GSPA Sbjct: 575 PRAATPTRPPSRP-PSRPSRPPSHPSAHGSPA 605
>CJ006_HUMAN (Q8IX21) Protein C10orf6| Length = 1173 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +1 Query: 40 RKLSPARPNNPPIPAESRRPPALSLGFGSPASRGRG 147 R+ PARP P PA PP L GS A G Sbjct: 3 RRCMPARPGFPSSPAPGSSPPRCHLRPGSTAHAAAG 38
>CJ006_MOUSE (Q6P9P0) Protein C10orf6 homolog| Length = 1278 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +1 Query: 40 RKLSPARPNNPPIPAESRRPPALSLGFGS--PASRGR 144 R+ PARP P PA PP L GS PA+ G+ Sbjct: 3 RRCMPARPGFPSSPAPGSSPPRCHLRPGSTAPAAAGK 39
>FTSK_CORGL (Q8NP53) DNA translocase ftsK| Length = 921 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +1 Query: 22 IPKSKPRKLSPARPNNPPIPAESRRP---PALSL 114 +PK+ PR+ P P P+PA + P PA SL Sbjct: 264 LPKAAPRRTPPLTPPPAPVPAPAPTPARRPAASL 297
>DEMA_PONPY (Q5R4B6) Dematin (Erythrocyte membrane protein band 4.9)| Length = 405 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%) Frame = +1 Query: 19 KIPKSKPRKLSPARPNNPPIP---AESRRPPALS 111 ++P+S+ R LSP + PP P A+SR P +S Sbjct: 77 ELPRSRERSLSPKSTSPPPSPEVWADSRSPGIIS 110
>DEMA_HUMAN (Q08495) Dematin (Erythrocyte membrane protein band 4.9)| Length = 405 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%) Frame = +1 Query: 19 KIPKSKPRKLSPARPNNPPIP---AESRRPPALS 111 ++P+S+ R LSP + PP P A+SR P +S Sbjct: 77 ELPRSRERSLSPKSTSPPPSPEVWADSRSPGIIS 110
>CJ006_PONPY (Q5REF4) Protein C10orf6 homolog| Length = 1174 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +1 Query: 40 RKLSPARPNNPPIPAESRRPPALSLGFGSPASRGRG 147 R+ PARP P PA PP L GS A G Sbjct: 3 RRCMPARPGFPSSPAPGSSPPRCHLRPGSTAHAAAG 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,829,703 Number of Sequences: 219361 Number of extensions: 759230 Number of successful extensions: 4249 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4204 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
