Clone Name | bart06e08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II) | 30 | 3.2 |
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>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)| Length = 518 Score = 30.0 bits (66), Expect = 3.2 Identities = 19/60 (31%), Positives = 21/60 (35%) Frame = +2 Query: 251 AVPPASHAAPTADSAVXXXXXXXXXXXXXXXXXXXXXXXXXSAKPAVRATNATASAVRAT 430 AVPPA AAP A+ A +A PA A A A A AT Sbjct: 433 AVPPADGAAPPAEGAAPAAEGAAPPADGAAPPAEAAAAPADAAAPAAEAAPAEAPAAEAT 492 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,549,156 Number of Sequences: 219361 Number of extensions: 230857 Number of successful extensions: 899 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 858 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 898 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)