ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 5e-16
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
3gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 94 5e-16
4dbj|AK108939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
5gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
8gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
10dbj|AK061327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
12gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 44 0.38
13gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10... 44 0.38
14dbj|AB097436.1| Oryza sativa (japonica cultivar-group) transposo... 42 1.5
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17ref|XM_533899.2| PREDICTED: Canis familiaris similar to calretic... 40 5.9
18ref|XM_862227.1| PREDICTED: Canis familiaris similar to calretic... 40 5.9
19ref|XM_862217.1| PREDICTED: Canis familiaris similar to calretic... 40 5.9
20ref|XM_862209.1| PREDICTED: Canis familiaris similar to calretic... 40 5.9
21ref|XM_848300.1| PREDICTED: Canis familiaris similar to calretic... 40 5.9
22ref|XM_387393.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 5.9
23emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.9
24emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.9
25emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 40 5.9
26gb|AC091096.7| Homo sapiens chromosome 8, clone RP11-587H10, com... 40 5.9
27dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.9
28gb|AE011742.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.9
29gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.9
30gb|AC022193.5|AC022193 Homo sapiens, clone RP11-23B3, complete s... 40 5.9
31gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.9
32emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.9
33gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.9
34gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.9

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                           
Query: 187     aacgaggcgctcaagaagggcctgcgcagggccgtcgcggtgtacccgcacctggccgga 246
               ||||||||| ||||| ||||||| | |||||||||||||| |||||| ||||| ||||| 
Sbjct: 4475539 aacgaggcgatcaaggagggcctcctcagggccgtcgcggcgtaccctcacctcgccggc 4475480

                                                                           
Query: 247     cgcttcgccgtcgaccaccggggcaggcgttgcatccacgtcaacaacgagggcgtgctt 306
               ||| |||||||||||||||  ||| | || | | ||||||| ||| || |||||||||| 
Sbjct: 4475479 cgcctcgccgtcgaccaccacggccgccgcttcctccacgtgaacgaccagggcgtgctc 4475420

                                 
Query: 307     gtcgtanaggccgccgtc 324
               |||||  ||||| |||||
Sbjct: 4475419 gtcgtcgaggccaccgtc 4475402



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                           
Query: 187     aacgaggcgctcaagaagggcctgcgcagggccgtcgcggtgtacccgcacctggccgga 246
               ||||||||| ||||| ||||||| | |||||||||||||| |||||| ||||| ||||| 
Sbjct: 4475654 aacgaggcgatcaaggagggcctcctcagggccgtcgcggcgtaccctcacctcgccggc 4475595

                                                                           
Query: 247     cgcttcgccgtcgaccaccggggcaggcgttgcatccacgtcaacaacgagggcgtgctt 306
               ||| |||||||||||||||  ||| | || | | ||||||| ||| || |||||||||| 
Sbjct: 4475594 cgcctcgccgtcgaccaccacggccgccgcttcctccacgtgaacgaccagggcgtgctc 4475535

                                 
Query: 307     gtcgtanaggccgccgtc 324
               |||||  ||||| |||||
Sbjct: 4475534 gtcgtcgaggccaccgtc 4475517



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>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                         
Query: 187   aacgaggcgctcaagaagggcctgcgcagggccgtcgcggtgtacccgcacctggccgga 246
             ||||||||| ||||| ||||||| | |||||||||||||| |||||| ||||| ||||| 
Sbjct: 80831 aacgaggcgatcaaggagggcctcctcagggccgtcgcggcgtaccctcacctcgccggc 80772

                                                                         
Query: 247   cgcttcgccgtcgaccaccggggcaggcgttgcatccacgtcaacaacgagggcgtgctt 306
             ||| |||||||||||||||  ||| | || | | ||||||| ||| || |||||||||| 
Sbjct: 80771 cgcctcgccgtcgaccaccacggccgccgcttcctccacgtgaacgaccagggcgtgctc 80712

                               
Query: 307   gtcgtanaggccgccgtc 324
             |||||  ||||| |||||
Sbjct: 80711 gtcgtcgaggccaccgtc 80694



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>dbj|AK108939.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B05, full
           insert sequence
          Length = 1965

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 115/138 (83%)
 Strand = Plus / Plus

                                                                       
Query: 187 aacgaggcgctcaagaagggcctgcgcagggccgtcgcggtgtacccgcacctggccgga 246
           ||||||||| ||||| ||||||| | |||||||||||||| |||||| ||||| ||||| 
Sbjct: 182 aacgaggcgatcaaggagggcctcctcagggccgtcgcggcgtaccctcacctcgccggc 241

                                                                       
Query: 247 cgcttcgccgtcgaccaccggggcaggcgttgcatccacgtcaacaacgagggcgtgctt 306
           ||| |||||||||||||||  ||| | || | | ||||||| ||| || |||||||||| 
Sbjct: 242 cgcctcgccgtcgaccaccacggccgccgcttcctccacgtgaacgaccagggcgtgctc 301

                             
Query: 307 gtcgtanaggccgccgtc 324
           |||||  ||||| |||||
Sbjct: 302 gtcgtcgaggccaccgtc 319



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>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06,
              complete sequence
          Length = 135774

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 96     cggcgagatggtcccgctgaccctcttcgaccgcgcc 132
              |||||||||||||||||| ||| ||||||||||||||
Sbjct: 121215 cggcgagatggtcccgctcaccgtcttcgaccgcgcc 121179



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 96       cggcgagatggtcccgctgaccctcttcgaccgcgcc 132
                |||||||||||||||||| ||| ||||||||||||||
Sbjct: 11667280 cggcgagatggtcccgctcaccgtcttcgaccgcgcc 11667244



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                     
Query: 96       cggcgagatggtcccgctgaccctcttcgaccgcgcc 132
                |||||||||||||||||| ||| ||||||||||||||
Sbjct: 11673720 cggcgagatggtcccgctcaccgtcttcgaccgcgcc 11673684



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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                          
Query: 79     acgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttg 138
              |||||||| ||  |||||||||||| ||| || || |||  ||| ||||||||  |||| 
Sbjct: 122859 acgccgcacccgctcgccggcgagaaggttcccctcaccgcctttgaccgcgcggccttc 122918

                                                                          
Query: 139    gacatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctc 198
              ||| |||||||||||||  |  ||| ||||  ||||||| | ||| ||| ||||||| ||
Sbjct: 122919 gacgtcttcgtccccatggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtc 122978

                                                 
Query: 199    aagaagggcctgcgcagggccgtcgcggtgtaccc 233
              ||| | ||||| || | ||||||||| | ||||||
Sbjct: 122979 aaggaaggcctccggatggccgtcgccgcgtaccc 123013



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 92     tcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttggacatcttcgtcc 151
              |||||||||||| |||||| || ||   |||| |||||||  |||| |||||||||||||
Sbjct: 125168 tcgccggcgagaaggtccccctcactgccttcaaccgcgcggccttcgacatcttcgtcc 125109

                  
Query: 152    ccat 155
              ||||
Sbjct: 125108 ccat 125105



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 283   cacgtcaacaacgagggcgtgct 305
             |||||||||||||||||||||||
Sbjct: 89019 cacgtcaacaacgagggcgtgct 88997



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 141/182 (77%)
 Strand = Plus / Minus

                                                                         
Query: 80    cgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttgg 139
             ||||||| ||  |||||||||||| ||| || ||  ||  ||||||||||||  |||| |
Sbjct: 89234 cgccgcacccgctcgccggcgagaaggttcccctctccgccttcgaccgcgcggccttcg 89175

                                                                         
Query: 140   acatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctca 199
             || ||||||||||| |  |  ||| ||||  ||||||| | ||| ||| ||||||| |||
Sbjct: 89174 acgtcttcgtccccttggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtca 89115

                                                                         
Query: 200   agaagggcctgcgcagggccgtcgcggtgtacccgcacctggccggacgcttcgccgtcg 259
             || ||||||| ||   ||||||||| | |||||| | | || | || ||| |||||||||
Sbjct: 89114 aggagggcctccgggtggccgtcgccgcgtaccctctcgtgtctggccgcatcgccgtcg 89055

               
Query: 260   ac 261
             ||
Sbjct: 89054 ac 89053



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                            
Query: 79       acgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttg 138
                |||||||| ||  |||||||||||| ||| || || |||  ||| ||||||||  |||| 
Sbjct: 24645957 acgccgcacccgctcgccggcgagaaggttcccctcaccgcctttgaccgcgcggccttc 24646016

                                                                            
Query: 139      gacatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctc 198
                ||| |||||||||||||  |  ||| ||||  ||||||| | ||| ||| ||||||| ||
Sbjct: 24646017 gacgtcttcgtccccatggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtc 24646076

                                                   
Query: 199      aagaagggcctgcgcagggccgtcgcggtgtaccc 233
                ||| | ||||| || | ||||||||| | ||||||
Sbjct: 24646077 aaggaaggcctccggatggccgtcgccgcgtaccc 24646111



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 92       tcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttggacatcttcgtcc 151
                |||||||||||| |||||| || ||   |||| |||||||  |||| |||||||||||||
Sbjct: 24648266 tcgccggcgagaaggtccccctcactgccttcaaccgcgcggccttcgacatcttcgtcc 24648207

                    
Query: 152      ccat 155
                ||||
Sbjct: 24648206 ccat 24648203



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 283      cacgtcaacaacgagggcgtgct 305
                |||||||||||||||||||||||
Sbjct: 24612117 cacgtcaacaacgagggcgtgct 24612095



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 141/182 (77%)
 Strand = Plus / Minus

                                                                            
Query: 80       cgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttgg 139
                ||||||| ||  |||||||||||| ||| || ||  ||  ||||||||||||  |||| |
Sbjct: 24612332 cgccgcacccgctcgccggcgagaaggttcccctctccgccttcgaccgcgcggccttcg 24612273

                                                                            
Query: 140      acatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctca 199
                || ||||||||||| |  |  ||| ||||  ||||||| | ||| ||| ||||||| |||
Sbjct: 24612272 acgtcttcgtccccttggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtca 24612213

                                                                            
Query: 200      agaagggcctgcgcagggccgtcgcggtgtacccgcacctggccggacgcttcgccgtcg 259
                || ||||||| ||   ||||||||| | |||||| | | || | || ||| |||||||||
Sbjct: 24612212 aggagggcctccgggtggccgtcgccgcgtaccctctcgtgtctggccgcatcgccgtcg 24612153

                  
Query: 260      ac 261
                ||
Sbjct: 24612152 ac 24612151



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>dbj|AK061327.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H12, full
           insert sequence
          Length = 1584

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                       
Query: 79  acgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttg 138
           |||||||| ||  |||||||||||| ||| || || |||  ||| ||||||||  |||| 
Sbjct: 85  acgccgcacccgctcgccggcgagaaggttcccctcaccgcctttgaccgcgcggccttc 144

                                                                       
Query: 139 gacatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctc 198
           ||| |||||||||||||  |  ||| ||||  ||||||| | ||| ||| ||||||| ||
Sbjct: 145 gacgtcttcgtccccatggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtc 204

                                              
Query: 199 aagaagggcctgcgcagggccgtcgcggtgtaccc 233
           ||| | ||||| || | ||||||||| | ||||||
Sbjct: 205 aaggaaggcctccggatggccgtcgccgcgtaccc 239



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 122/155 (78%)
 Strand = Plus / Plus

                                                                            
Query: 79       acgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttg 138
                |||||||| ||  |||||||||||| ||| || || |||  ||| ||||||||  |||| 
Sbjct: 24957627 acgccgcacccgctcgccggcgagaaggttcccctcaccgcctttgaccgcgcggccttc 24957686

                                                                            
Query: 139      gacatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctc 198
                ||| |||||||||||||  |  ||| ||||  ||||||| | ||| ||| ||||||| ||
Sbjct: 24957687 gacgtcttcgtccccatggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtc 24957746

                                                   
Query: 199      aagaagggcctgcgcagggccgtcgcggtgtaccc 233
                ||| | ||||| || | ||||||||| | ||||||
Sbjct: 24957747 aaggaaggcctccggatggccgtcgccgcgtaccc 24957781



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 92       tcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttggacatcttcgtcc 151
                |||||||||||| |||||| || ||   |||| |||||||  |||| |||||||||||||
Sbjct: 24959936 tcgccggcgagaaggtccccctcactgccttcaaccgcgcggccttcgacatcttcgtcc 24959877

                    
Query: 152      ccat 155
                ||||
Sbjct: 24959876 ccat 24959873



 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 283      cacgtcaacaacgagggcgtgct 305
                |||||||||||||||||||||||
Sbjct: 24923787 cacgtcaacaacgagggcgtgct 24923765



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 141/182 (77%)
 Strand = Plus / Minus

                                                                            
Query: 80       cgccgcancctgtcgccggcgagatggtcccgctgaccctcttcgaccgcgccaccttgg 139
                ||||||| ||  |||||||||||| ||| || ||  ||  ||||||||||||  |||| |
Sbjct: 24924002 cgccgcacccgctcgccggcgagaaggttcccctctccgccttcgaccgcgcggccttcg 24923943

                                                                            
Query: 140      acatcttcgtccccatcatcctcgtctacgccgcgccgacnccgcccaacgaggcgctca 199
                || ||||||||||| |  |  ||| ||||  ||||||| | ||| ||| ||||||| |||
Sbjct: 24923942 acgtcttcgtccccttggtgttcgcctaccgcgcgccggcgccgtccagcgaggcggtca 24923883

                                                                            
Query: 200      agaagggcctgcgcagggccgtcgcggtgtacccgcacctggccggacgcttcgccgtcg 259
                || ||||||| ||   ||||||||| | |||||| | | || | || ||| |||||||||
Sbjct: 24923882 aggagggcctccgggtggccgtcgccgcgtaccctctcgtgtctggccgcatcgccgtcg 24923823

                  
Query: 260      ac 261
                ||
Sbjct: 24923822 ac 24923821



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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 287     tcaacaacgagggcgtgcttgt 308
               ||||||||||||||||||||||
Sbjct: 1131766 tcaacaacgagggcgtgcttgt 1131787



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 287     tcaacaacgagggcgtgcttgt 308
               ||||||||||||||||||||||
Sbjct: 1128231 tcaacaacgagggcgtgcttgt 1128210



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>gb|AC159450.1| Trypanosoma brucei chromosome 7 clone RPCI93-5F10, complete sequence
          Length = 154291

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 287   tcaacaacgagggcgtgcttgt 308
             ||||||||||||||||||||||
Sbjct: 42259 tcaacaacgagggcgtgcttgt 42280



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 287   tcaacaacgagggcgtgcttgt 308
             ||||||||||||||||||||||
Sbjct: 38724 tcaacaacgagggcgtgcttgt 38703



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>dbj|AB097436.1| Oryza sativa (japonica cultivar-group) transposon AnacA9 DNA,
            complete sequence
          Length = 1758

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 336  ggcgagcgtggtgaccgacgg 356
            |||||||||||||||||||||
Sbjct: 1256 ggcgagcgtggtgaccgacgg 1236



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 336      ggcgagcgtggtgaccgacgg 356
                |||||||||||||||||||||
Sbjct: 39755584 ggcgagcgtggtgaccgacgg 39755564



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>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0470A12
          Length = 185095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 336    ggcgagcgtggtgaccgacgg 356
              |||||||||||||||||||||
Sbjct: 106483 ggcgagcgtggtgaccgacgg 106463



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>ref|XM_533899.2| PREDICTED: Canis familiaris similar to calreticulin, transcript
           variant 1 (LOC476694), mRNA
          Length = 1896

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 389 ctgcagtgccgccgccggaggaga 412
           |||||| |||||||||||||||||
Sbjct: 9   ctgcagagccgccgccggaggaga 32



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>ref|XM_862227.1| PREDICTED: Canis familiaris similar to calreticulin, transcript
           variant 5 (LOC476694), mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 389 ctgcagtgccgccgccggaggaga 412
           |||||| |||||||||||||||||
Sbjct: 9   ctgcagagccgccgccggaggaga 32



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>ref|XM_862217.1| PREDICTED: Canis familiaris similar to calreticulin, transcript
           variant 4 (LOC476694), mRNA
          Length = 1850

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 389 ctgcagtgccgccgccggaggaga 412
           |||||| |||||||||||||||||
Sbjct: 8   ctgcagagccgccgccggaggaga 31



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>ref|XM_862209.1| PREDICTED: Canis familiaris similar to calreticulin, transcript
           variant 3 (LOC476694), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 389 ctgcagtgccgccgccggaggaga 412
           |||||| |||||||||||||||||
Sbjct: 3   ctgcagagccgccgccggaggaga 26



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>ref|XM_848300.1| PREDICTED: Canis familiaris similar to calreticulin, transcript
           variant 2 (LOC476694), mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 389 ctgcagtgccgccgccggaggaga 412
           |||||| |||||||||||||||||
Sbjct: 9   ctgcagagccgccgccggaggaga 32



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>ref|XM_387393.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07217.1)
            partial mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 183  gcccaacgaggcgctcaagaaggg 206
            |||||||||||| |||||||||||
Sbjct: 1389 gcccaacgaggccctcaagaaggg 1412



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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    ccaacgaggcgctcaagaag 204
              ||||||||||||||||||||
Sbjct: 335546 ccaacgaggcgctcaagaag 335565



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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    ccaacgaggcgctcaagaag 204
              ||||||||||||||||||||
Sbjct: 243380 ccaacgaggcgctcaagaag 243399



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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    ccaacgaggcgctcaagaag 204
              ||||||||||||||||||||
Sbjct: 110656 ccaacgaggcgctcaagaag 110675



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>gb|AC091096.7| Homo sapiens chromosome 8, clone RP11-587H10, complete sequence
          Length = 207630

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 131    ccaccttggacatcttcgtcccca 154
              ||||||||||||||| ||||||||
Sbjct: 161689 ccaccttggacatctacgtcccca 161712



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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tcgatctggcgagcgtggtg 348
              ||||||||||||||||||||
Sbjct: 889346 tcgatctggcgagcgtggtg 889365



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>gb|AE011742.1| Xanthomonas axonopodis pv. citri str. 306,  section 120 of 469 of the
            complete genome
          Length = 12234

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  tcgatctggcgagcgtggtg 348
            ||||||||||||||||||||
Sbjct: 6213 tcgatctggcgagcgtggtg 6232



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 394     gtgccgccgccggaggagat 413
               ||||||||||||||||||||
Sbjct: 4809810 gtgccgccgccggaggagat 4809829



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    gtgccgccgccggaggagat 413
              ||||||||||||||||||||
Sbjct: 244132 gtgccgccgccggaggagat 244113



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>gb|AC022193.5|AC022193 Homo sapiens, clone RP11-23B3, complete sequence
          Length = 184228

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    ccaccttggacatcttcgtcccca 154
              ||||||||||||||| ||||||||
Sbjct: 130356 ccaccttggacatctacgtcccca 130333



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      ggcgagcagcaccatgctga 64
               ||||||||||||||||||||
Sbjct: 4240653 ggcgagcagcaccatgctga 4240634



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 278     gcatccacgtcaacaacgag 297
               ||||||||||||||||||||
Sbjct: 4808786 gcatccacgtcaacaacgag 4808767



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tcgatctggcgagcgtggtg 348
              ||||||||||||||||||||
Sbjct: 920703 tcgatctggcgagcgtggtg 920722



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     gccgccgtccccgtcgatct 335
               ||||||||||||||||||||
Sbjct: 3122503 gccgccgtccccgtcgatct 3122522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,256,430
Number of Sequences: 3902068
Number of extensions: 2256430
Number of successful extensions: 44752
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43782
Number of HSP's gapped (non-prelim): 970
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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