Clone Name | bart06e06 |
---|---|
Clone Library Name | barley_pub |
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = +2 Query: 11 CDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGSHFRRDSXVVIDQALAY 160 C SW L VEAHN+ G++T+P C Y+ G +R DS V QA Y Sbjct: 42 CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFY 91
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 48.5 bits (114), Expect = 5e-06 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = +2 Query: 11 CDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGSHFRRDSXVVIDQALAY 160 C SW L VEAHN+ G++T+P C Y+ G +R DS V QA Y Sbjct: 39 CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFY 88
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 47.8 bits (112), Expect = 8e-06 Identities = 23/50 (46%), Positives = 28/50 (56%) Frame = +2 Query: 11 CDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGSHFRRDSXVVIDQALAY 160 C S+ L VEAHN+R +KT+P C Y+ G FR DS V QA Y Sbjct: 43 CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFY 92
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +2 Query: 5 MACDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGSHFRRDSXVVIDQALAY 160 + C +W VE +N+ WKT+P C Y YM+G ++ + V D+A Y Sbjct: 41 LKCTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEY 92
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +2 Query: 11 CDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGS-HFRRDSXVVIDQALAY 160 C SW LGVE N+ + TVPA+C+ Y Y++ S ++ DS V +A Y Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFY 102
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 42.7 bits (99), Expect = 3e-04 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +2 Query: 11 CDSWVLGVEAHNVRGWKTVPASCEGYXGHYMLGS-HFRRDSXVVIDQALAY 160 C SW LGVE N+ + TVPA+C+ Y Y++ S ++ DS V +A Y Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFY 107
>NIFD_METBA (P55170) Nitrogenase molybdenum-iron protein alpha chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 532 Score = 28.1 bits (61), Expect = 6.8 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +2 Query: 35 EAHNVRGWKTVPASCEGYXGHYMLGSH 115 EA G K +PA CEGY G H Sbjct: 168 EAEKEHGIKVIPARCEGYRGVSQSAGH 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.142 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,473,961 Number of Sequences: 219361 Number of extensions: 181014 Number of successful extensions: 427 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 426 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 427 length of database: 80,573,946 effective HSP length: 30 effective length of database: 73,993,116 effective search space used: 1775834784 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)