ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phos... 167 1e-38
2emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putati... 167 1e-38
3gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome... 137 1e-29
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 137 1e-29
5dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 2e-22
6dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
7dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
8dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-15
9gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 0.51
10gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.51
11gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.51
12ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predic... 40 2.0
13emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 40 2.0
14emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 2.0
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
16dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
17dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
18dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
19dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
20dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
21dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
22dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
23emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chr... 40 2.0
24gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC... 40 2.0
25gb|AY456993.1| Homo sapiens Nance-Horan syndrome protein isoform... 38 8.0
26gb|AY456992.1| Homo sapiens Nance-Horan syndrome protein isoform... 38 8.0
27ref|XM_514933.1| PREDICTED: Pan troglodytes transmembrane protei... 38 8.0
28ref|XM_531620.1| PREDICTED: Pan troglodytes LOC474130 (LOC474130... 38 8.0
29ref|XM_367440.1| Magnaporthe grisea 70-15 hypothetical protein (... 38 8.0
30emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 38 8.0
31gb|AY436752.1| Homo sapiens Nance-Horan syndrome protein (NHS) m... 38 8.0
32emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 o... 38 8.0
33gb|AC115286.3| Homo sapiens chromosome 1 clone RP4-657M3, comple... 38 8.0
34emb|CR749300.1| Homo sapiens mRNA; cDNA DKFZp781F2016 (from clon... 38 8.0
35gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, com... 38 8.0
36emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 38 8.0
37emb|CR936788.1| Homo sapiens mRNA; cDNA DKFZp781L0254 (from clon... 38 8.0
38emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 m... 38 8.0
39gb|AE011682.1| Xanthomonas axonopodis pv. citri str. 306, secti... 38 8.0
40ref|NM_198270.2| Homo sapiens Nance-Horan syndrome (congenital c... 38 8.0
41gb|AY036109.1| Xanthomonas campestris pv. vesicatoria outer prot... 38 8.0
42gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 8.0
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 8.0
45gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Can... 38 8.0
46dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
47dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
48dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.0
49dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
50dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
51dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
52ref|NM_207803.1| Eremothecium gossypii AAL092Cp (AAL092C), mRNA 38 8.0
53dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.0
54gb|AY106317.1| Zea mays PCO101473 mRNA sequence 38 8.0
55gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 8.0
56gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 38 8.0
57gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosom... 38 8.0
58emb|AL928698.3| Mouse DNA sequence from clone RP23-183D18 on chr... 38 8.0
59gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.0 
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase
          Length = 2748

 Score =  167 bits (84), Expect = 1e-38
 Identities = 136/154 (88%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
            |||||||||| ||||||  |||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 1974 tggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaagacgg 2033

                                                                        
Query: 66   tgcccgcgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgcg 125
            |||| || | ||||||||||||| | || |||||||||||||||| ||| ||||| ||||
Sbjct: 2034 tgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccggcgcg 2093

                                              
Query: 126  actccnaggtcgtcatcgaccaggccctcgccta 159
            ||| | |||||||||||||||||||| |||||||
Sbjct: 2094 actgcaaggtcgtcatcgaccaggccatcgccta 2127
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>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3
           gene)
          Length = 1152

 Score =  167 bits (84), Expect = 1e-38
 Identities = 136/154 (88%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
           |||||||||| ||||||  |||||| ||||||||| |||||||||||| |||||||||||
Sbjct: 378 tggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactggaagacgg 437

                                                                       
Query: 66  tgcccgcgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgcg 125
           |||| || | ||||||||||||| | || |||||||||||||||| ||| ||||| ||||
Sbjct: 438 tgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttccggcgcg 497

                                             
Query: 126 actccnaggtcgtcatcgaccaggccctcgccta 159
           ||| | |||||||||||||||||||| |||||||
Sbjct: 498 actgcaaggtcgtcatcgaccaggccatcgccta 531
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>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01,
             complete sequence
          Length = 135184

 Score =  137 bits (69), Expect = 1e-29
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                         
Query: 6     tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
             |||||||||||||||||  ||||| |||||||||||||||||||    | ||||||||||
Sbjct: 92224 tggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtggaagacgg 92165

                                                                         
Query: 66    tgcccgcgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgcg 125
             |||| || ||||||||||||||| |||||||||||||||||||| |||| | ||||||||
Sbjct: 92164 tgccggccagctgcgagggctacgtcggccactacatgctcggcggccactaccgccgcg 92105

                 
Query: 126   actc 129
             ||||
Sbjct: 92104 actc 92101



 Score =  113 bits (57), Expect = 2e-22
 Identities = 131/155 (84%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                          
Query: 6      tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
              |||||||||||||||||  ||| || |||||||| |||||||||   || ||||||||||
Sbjct: 105846 tggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtggaagacgg 105787

                                                                          
Query: 66     tgcccgcgagctgcgagggctacntcggccactacatgctc-ggcagccatttccgccgc 124
              |||| || || |||||||||||| ||||||||||||||||| ||  |||| | |||||| 
Sbjct: 105786 tgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccactaccgccgt 105727

                                                 
Query: 125    gactccnaggtcgtcatcgaccaggccctcgccta 159
              ||||||   |||||||||||| ||||| |||||||
Sbjct: 105726 gactccgccgtcgtcatcgacgaggccatcgccta 105692



 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 129/155 (83%), Gaps = 2/155 (1%)
 Strand = Plus / Minus

                                                                         
Query: 6     tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
             |||| ||||||||||||  |||||| ||||||||||||||||||   | ||||| |||||
Sbjct: 83948 tggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactggaggacgg 83889

                                                                         
Query: 66    tgcccg-cgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgc 124
             |||| | |||| |||||||||||| |||||||||||||||| |||   || | |||||||
Sbjct: 83888 tgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacactaccgccgc 83830

                                                
Query: 125   gactccnaggtcgtcatcgaccaggccctcgccta 159
             |||| |   |||||| ||||| ||||| |||||||
Sbjct: 83829 gacttcgccgtcgtcgtcgacgaggccgtcgccta 83795



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                   
Query: 31   ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
            |||||||||||||||| |    |||||||||||||||||
Sbjct: 6002 ggtggaggcgcacaacatcatcggctggaagacggtgcc 5964
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  137 bits (69), Expect = 1e-29
 Identities = 110/124 (88%)
 Strand = Plus / Minus

                                                                           
Query: 6       tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
               |||||||||||||||||  ||||| |||||||||||||||||||    | ||||||||||
Sbjct: 5559015 tggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtggaagacgg 5558956

                                                                           
Query: 66      tgcccgcgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgcg 125
               |||| || ||||||||||||||| |||||||||||||||||||| |||| | ||||||||
Sbjct: 5558955 tgccggccagctgcgagggctacgtcggccactacatgctcggcggccactaccgccgcg 5558896

                   
Query: 126     actc 129
               ||||
Sbjct: 5558895 actc 5558892



 Score =  113 bits (57), Expect = 2e-22
 Identities = 131/155 (84%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                           
Query: 6       tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
               |||||||||||||||||  ||| || |||||||| |||||||||   || ||||||||||
Sbjct: 5572637 tggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtggaagacgg 5572578

                                                                           
Query: 66      tgcccgcgagctgcgagggctacntcggccactacatgctc-ggcagccatttccgccgc 124
               |||| || || |||||||||||| ||||||||||||||||| ||  |||| | |||||| 
Sbjct: 5572577 tgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccactaccgccgt 5572518

                                                  
Query: 125     gactccnaggtcgtcatcgaccaggccctcgccta 159
               ||||||   |||||||||||| ||||| |||||||
Sbjct: 5572517 gactccgccgtcgtcatcgacgaggccatcgccta 5572483



 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 129/155 (83%), Gaps = 2/155 (1%)
 Strand = Plus / Minus

                                                                           
Query: 6       tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
               |||| ||||||||||||  |||||| ||||||||||||||||||   | ||||| |||||
Sbjct: 5550739 tggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactggaggacgg 5550680

                                                                           
Query: 66      tgcccg-cgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgc 124
               |||| | |||| |||||||||||| |||||||||||||||| |||   || | |||||||
Sbjct: 5550679 tgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacactaccgccgc 5550621

                                                  
Query: 125     gactccnaggtcgtcatcgaccaggccctcgccta 159
               |||| |   |||||| ||||| ||||| |||||||
Sbjct: 5550620 gacttcgccgtcgtcgtcgacgaggccgtcgccta 5550586



 Score = 42.1 bits (21), Expect = 0.51
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 53      ggctggaagacggtgcccgcgagctgcgagggctacntcg 92
               ||||||||||||||||| |||| |||||  |||||| |||
Sbjct: 5464426 ggctggaagacggtgccggcgaactgcgctggctacgtcg 5464387



 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                      
Query: 31      ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
               |||||||||||||||| |    |||||||||||||||||
Sbjct: 5472793 ggtggaggcgcacaacatcatcggctggaagacggtgcc 5472755
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>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full
           insert sequence
          Length = 1131

 Score =  113 bits (57), Expect = 2e-22
 Identities = 131/155 (84%), Gaps = 1/155 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
           |||||||||||||||||  ||| || |||||||| |||||||||   || ||||||||||
Sbjct: 225 tggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtggaagacgg 284

                                                                       
Query: 66  tgcccgcgagctgcgagggctacntcggccactacatgctc-ggcagccatttccgccgc 124
           |||| || || |||||||||||| ||||||||||||||||| ||  |||| | |||||| 
Sbjct: 285 tgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccactaccgccgt 344

                                              
Query: 125 gactccnaggtcgtcatcgaccaggccctcgccta 159
           ||||||   |||||||||||| ||||| |||||||
Sbjct: 345 gactccgccgtcgtcatcgacgaggccatcgccta 379
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>dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F12, full
           insert sequence
          Length = 953

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 129/155 (83%), Gaps = 2/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
           |||| ||||||||||||  |||||| ||||||||||||||||||   | ||||| |||||
Sbjct: 252 tggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactggaggacgg 311

                                                                       
Query: 66  tgcccg-cgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgc 124
           |||| | |||| |||||||||||| |||||||||||||||| |||   || | |||||||
Sbjct: 312 tgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacactaccgccgc 370

                                              
Query: 125 gactccnaggtcgtcatcgaccaggccctcgccta 159
           |||| |   |||||| ||||| ||||| |||||||
Sbjct: 371 gacttcgccgtcgtcgtcgacgaggccgtcgccta 405
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>dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082K18, full
           insert sequence
          Length = 2143

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 129/155 (83%), Gaps = 2/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
           |||| ||||||||||||  |||||| ||||||||||||||||||   | ||||| |||||
Sbjct: 250 tggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactggaggacgg 309

                                                                       
Query: 66  tgcccg-cgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgc 124
           |||| | |||| |||||||||||| |||||||||||||||| |||   || | |||||||
Sbjct: 310 tgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacactaccgccgc 368

                                              
Query: 125 gactccnaggtcgtcatcgaccaggccctcgccta 159
           |||| |   |||||| ||||| ||||| |||||||
Sbjct: 369 gacttcgccgtcgtcgtcgacgaggccgtcgccta 403
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>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full
           insert sequence
          Length = 1076

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 129/155 (83%), Gaps = 2/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcggggctggaagacgg 65
           |||| ||||||||||||  |||||| ||||||||||||||||||   | ||||| |||||
Sbjct: 252 tggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactggaggacgg 311

                                                                       
Query: 66  tgcccg-cgagctgcgagggctacntcggccactacatgctcggcagccatttccgccgc 124
           |||| | |||| |||||||||||| |||||||||||||||| |||   || | |||||||
Sbjct: 312 tgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacactaccgccgc 370

                                              
Query: 125 gactccnaggtcgtcatcgaccaggccctcgccta 159
           |||| |   |||||| ||||| ||||| |||||||
Sbjct: 371 gacttcgccgtcgtcgtcgacgaggccgtcgccta 405
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      ccgaatggcgtgcgacagctg 21
              |||||||||||||||||||||
Sbjct: 240336 ccgaatggcgtgcgacagctg 240356
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>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
              complete sequence
          Length = 153366

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 53     ggctggaagacggtgcccgcgagctgcgagggctacntcg 92
              ||||||||||||||||| |||| |||||  |||||| |||
Sbjct: 151100 ggctggaagacggtgccggcgaactgcgctggctacgtcg 151061
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>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNOa0076M01, complete sequence
          Length = 36050

 Score = 42.1 bits (21), Expect = 0.51
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 53    ggctggaagacggtgcccgcgagctgcgagggctacntcg 92
             ||||||||||||||||| |||| |||||  |||||| |||
Sbjct: 18757 ggctggaagacggtgccggcgaactgcgctggctacgtcg 18718
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>ref|NM_189664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 196 gtggaggcgaacaacgtgcgggggtgga 223
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>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cggcagccatttccgccgcg 125
             ||||||||||||||||||||
Sbjct: 13266 cggcagccatttccgccgcg 13285
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 134    gtcgtcatcgaccaggccctcgcc 157
              |||||||||||| |||||||||||
Sbjct: 195232 gtcgtcatcgacaaggccctcgcc 195255
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 32      gtggaggcgcacaacgtgcggggctgga 59
               ||||||||| ||||||||||||| ||||
Sbjct: 4872376 gtggaggcgaacaacgtgcgggggtgga 4872349
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>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 32     gtggaggcgcacaacgtgcggggctgga 59
              ||||||||| ||||||||||||| ||||
Sbjct: 117025 gtggaggcgaacaacgtgcgggggtgga 116998
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>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 219 gtggaggcgaacaacgtgcgggggtgga 246
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>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full
           insert sequence
          Length = 1094

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 218 gtggaggcgaacaacgtgcgggggtgga 245
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>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 219 gtggaggcgaacaacgtgcgggggtgga 246
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>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full
           insert sequence
          Length = 1308

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 432 gtggaggcgaacaacgtgcgggggtgga 459
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>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 219 gtggaggcgaacaacgtgcgggggtgga 246
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>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full
           insert sequence
          Length = 1114

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  gtggaggcgcacaacgtgcggggctgga 59
           ||||||||| ||||||||||||| ||||
Sbjct: 219 gtggaggcgaacaacgtgcgggggtgga 246
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>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
             sequence
          Length = 209214

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    cagctgggtgctgggggtgg 35
             ||||||||||||||||||||
Sbjct: 36203 cagctgggtgctgggggtgg 36184
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>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and
            pglZ) genes, complete cds's
          Length = 9461

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 134  gtcgtcatcgaccaggccctcgcc 157
            |||||||||||| |||||||||||
Sbjct: 2919 gtcgtcatcgacaaggccctcgcc 2942
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>gb|AY456993.1| Homo sapiens Nance-Horan syndrome protein isoform 2 (NHS) mRNA,
            complete cds, alternatively spliced
          Length = 8868

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 7350 tgggtgctgggggtggagg 7368
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>gb|AY456992.1| Homo sapiens Nance-Horan syndrome protein isoform 1 (NHS) mRNA,
            complete cds, alternatively spliced
          Length = 8213

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 6695 tgggtgctgggggtggagg 6713
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>ref|XM_514933.1| PREDICTED: Pan troglodytes transmembrane protein 1 (LOC458596),
           mRNA
          Length = 7458

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   tggcgtgcgacagctgggtgctggggg 32
           ||||||| |||||||||||||| ||||
Sbjct: 314 tggcgtgggacagctgggtgcttgggg 340
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>ref|XM_531620.1| PREDICTED: Pan troglodytes LOC474130 (LOC474130), mRNA
          Length = 618

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 6   tggcgtgcgacagctgggtgctggggg 32
           ||||||| |||||||||||||| ||||
Sbjct: 278 tggcgtgggacagctgggtgcttgggg 304
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>ref|XM_367440.1| Magnaporthe grisea 70-15 hypothetical protein (MG07365.4) partial
           mRNA
          Length = 1173

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 136 cgtcatcgaccaggccctcgcct 158
           ||||||||||| |||||||||||
Sbjct: 504 cgtcatcgacccggccctcgcct 526
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    catcgaccaggccctcgcc 157
              |||||||||||||||||||
Sbjct: 653571 catcgaccaggccctcgcc 653553
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>gb|AY436752.1| Homo sapiens Nance-Horan syndrome protein (NHS) mRNA, complete cds
          Length = 8758

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 7227 tgggtgctgggggtggagg 7245
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>emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 on chromosome Xp22.11-22.2
              Contains a calcium binding protein P22 (CHP)pseudogene, a
              novel gene, the 3' end of the NHS gene for Nance-Horan
              syndrome (congenital cataracts and dental anomalies), the
              SCML1 gene for sex comb on midleg-like 1 (Drosophila), a
              novel pseudogene and the RAI2 gene for retinoic acid
              induced 2, complete sequence
          Length = 208609

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     tgggtgctgggggtggagg 38
              |||||||||||||||||||
Sbjct: 108349 tgggtgctgggggtggagg 108331
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>gb|AC115286.3| Homo sapiens chromosome 1 clone RP4-657M3, complete sequence
          Length = 125032

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 24   tgctgggggtggaggcgca 42
            |||||||||||||||||||
Sbjct: 4042 tgctgggggtggaggcgca 4060
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>emb|CR749300.1| Homo sapiens mRNA; cDNA DKFZp781F2016 (from clone DKFZp781F2016)
          Length = 5615

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 4065 tgggtgctgggggtggagg 4083
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>gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, complete sequence
          Length = 246033

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     gacagctgggtgctggggg 32
              |||||||||||||||||||
Sbjct: 167789 gacagctgggtgctggggg 167771
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 52    gggctggaagacggtgcccgcga 74
             |||||||||||||| ||||||||
Sbjct: 98469 gggctggaagacggcgcccgcga 98447
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>emb|CR936788.1| Homo sapiens mRNA; cDNA DKFZp781L0254 (from clone DKFZp781L0254)
          Length = 7952

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 6401 tgggtgctgggggtggagg 6419
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>emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 map 22q22.3, complete
             sequence
          Length = 176622

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 6     tggcgtgcgacagctgggtgctggggg 32
             ||||||| |||||||||||||| ||||
Sbjct: 38297 tggcgtgggacagctgggtgcttgggg 38323
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>gb|AE011682.1| Xanthomonas axonopodis pv. citri str. 306,  section 60 of 469 of the
            complete genome
          Length = 10607

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 139  catcgaccaggccctcgcc 157
            |||||||||||||||||||
Sbjct: 1476 catcgaccaggccctcgcc 1458
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>ref|NM_198270.2| Homo sapiens Nance-Horan syndrome (congenital cataracts and dental
            anomalies) (NHS), mRNA
          Length = 8776

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   tgggtgctgggggtggagg 38
            |||||||||||||||||||
Sbjct: 7227 tgggtgctgggggtggagg 7245
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>gb|AY036109.1| Xanthomonas campestris pv. vesicatoria outer protein B gene, complete
             cds
          Length = 23471

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   catcgaccaggccctcgcc 157
             |||||||||||||||||||
Sbjct: 17963 catcgaccaggccctcgcc 17981
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 15     acagctgggtgctgggggtggag 37
              ||||||||||||||| |||||||
Sbjct: 180017 acagctgggtgctggaggtggag 180039
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 75      gctgcgagggctacntcggcca 96
               |||||||||||||| |||||||
Sbjct: 6045323 gctgcgagggctacatcggcca 6045344
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 54      gctggaagacggtgcccgc 72
               |||||||||||||||||||
Sbjct: 4890659 gctggaagacggtgcccgc 4890641
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>gb|AC006205.9| Homo sapiens 12 PAC RP5-1154L15 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 120084

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 19    ctgggtgctgggggtggaggcgc 41
             ||||| |||||||||||||||||
Sbjct: 54054 ctgggagctgggggtggaggcgc 54032
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>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1014_H11
          Length = 122464

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 75    gctgcgagggctacntcggcca 96
             |||||||||||||| |||||||
Sbjct: 96135 gctgcgagggctacatcggcca 96156
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>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full
           insert sequence
          Length = 1168

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 31  ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
           |||||||||||||||| |    |||||||||||||||||
Sbjct: 226 ggtggaggcgcacaacatcatcggctggaagacggtgcc 264
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>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0486F07
          Length = 154926

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 75   gctgcgagggctacntcggcca 96
            |||||||||||||| |||||||
Sbjct: 1340 gctgcgagggctacatcggcca 1361
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>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full
           insert sequence
          Length = 1081

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 31  ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
           |||||||||||||||| |    |||||||||||||||||
Sbjct: 226 ggtggaggcgcacaacatcatcggctggaagacggtgcc 264
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>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full
           insert sequence
          Length = 1081

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 31  ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
           |||||||||||||||| |    |||||||||||||||||
Sbjct: 226 ggtggaggcgcacaacatcatcggctggaagacggtgcc 264
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>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full
           insert sequence
          Length = 1081

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 31  ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
           |||||||||||||||| |    |||||||||||||||||
Sbjct: 226 ggtggaggcgcacaacatcatcggctggaagacggtgcc 264
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>ref|NM_207803.1| Eremothecium gossypii AAL092Cp (AAL092C), mRNA
          Length = 603

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 15  acagctgggtgctgggggtggag 37
           ||||||||||||||| |||||||
Sbjct: 391 acagctgggtgctggaggtggag 369
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>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full
           insert sequence
          Length = 1096

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 31  ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
           |||||||||||||||| |    |||||||||||||||||
Sbjct: 226 ggtggaggcgcacaacatcatcggctggaagacggtgcc 264
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>gb|AY106317.1| Zea mays PCO101473 mRNA sequence
          Length = 827

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                     
Query: 118 ccgccgcgactccnaggtcgtcatcgaccaggccctcgccta 159
           |||||| ||||||   |||||||||||| ||||| |||||||
Sbjct: 11  ccgccgggactcccgcgtcgtcatcgacgaggccatcgccta 52
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 62     acggtgcccgcgagctgcg 80
              |||||||||||||||||||
Sbjct: 603276 acggtgcccgcgagctgcg 603294
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    gctggaagacggtgcccgc 72
             |||||||||||||||||||
Sbjct: 97600 gctggaagacggtgcccgc 97582
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>gb|AC140934.1| Gallus gallus BAC clone TAM31-90J8 from chromosome ul, complete
             sequence
          Length = 97842

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    cagctgggtgctgggggtg 34
             |||||||||||||||||||
Sbjct: 24122 cagctgggtgctgggggtg 24104
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>emb|AL928698.3| Mouse DNA sequence from clone RP23-183D18 on chromosome 4, complete
              sequence
          Length = 151262

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     tgctgggggtggaggcgca 42
              |||||||||||||||||||
Sbjct: 126983 tgctgggggtggaggcgca 126965
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>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNOa0023G10, complete sequence
          Length = 36253

 Score = 38.2 bits (19), Expect = 8.0
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                    
Query: 31    ggtggaggcgcacaacgtgcggggctggaagacggtgcc 69
             |||||||||||||||| |    |||||||||||||||||
Sbjct: 26233 ggtggaggcgcacaacatcatcggctggaagacggtgcc 26195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 802,584
Number of Sequences: 3902068
Number of extensions: 802584
Number of successful extensions: 59753
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 59082
Number of HSP's gapped (non-prelim): 655
length of query: 165
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 143
effective length of database: 17,147,199,772
effective search space: 2452049567396
effective search space used: 2452049567396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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