>dbj|AK120982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042C18, full
           insert sequence
          Length = 1296

 Score =  327 bits (165), Expect = 1e-86
 Identities = 228/249 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccgaggctggagggcgccagcgaggagctgagggccgcggcggcgcagagcctcgactg 145
           |||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 148 gccgaggctggagggcgcgagcgaggagctgagggccgccgcggcgcagtgcctcgactg 207

                                                                       
Query: 146 ggcgccggcgcgccggcgcgtgagcgcggccttcgcgcccgtgctccccacgctcgacca 205
           ||| || |||||||| |||||| |||  ||||||||||| ||||||||||| ||||||||
Sbjct: 208 ggcccccgcgcgccgccgcgtgcgcggcgccttcgcgcctgtgctccccaccctcgacca 267

                                                                       
Query: 206 ctggctgttcaagatggcgcccaagggaatccagatggaagagaattttgagaccaactc 265
           ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 268 ctgcctgttcaagatggctcccaagggaatccagatggaagagaattttgaaaccaattc 327

                                                                       
Query: 266 acagggagttgaaatattctggaagagttggctgcctagggagggcactcccaccaaggc 325
           | |||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 328 aaagggggttgagattttctggaagagttggctgcctagggagggcactgccaccaaggc 387

                    
Query: 326 agcgctttt 334
           ||| |||||
Sbjct: 388 agcactttt 396

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  168 bits (85), Expect = 7e-39
 Identities = 121/133 (90%)
 Strand = Plus / Minus

                                                                            
Query: 86       gccgaggctggagggcgccagcgaggagctgagggccgcggcggcgcagagcctcgactg 145
                |||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 28380270 gccgaggctggagggcgcgagcgaggagctgagggccgccgcggcgcagtgcctcgactg 28380211

                                                                            
Query: 146      ggcgccggcgcgccggcgcgtgagcgcggccttcgcgcccgtgctccccacgctcgacca 205
                ||| || |||||||| |||||| |||  ||||||||||| ||||||||||| ||||||||
Sbjct: 28380210 ggcccccgcgcgccgccgcgtgcgcggcgccttcgcgcctgtgctccccaccctcgacca 28380151

                             
Query: 206      ctggctgttcaag 218
                ||| |||||||||
Sbjct: 28380150 ctgcctgttcaag 28380138



 Score =  111 bits (56), Expect = 1e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                            
Query: 247      agaattttgagaccaactcacagggagttgaaatattctggaagagttggctgcctaggg 306
                |||||||||| ||||| ||| |||| ||||| || |||||||||||||||||||||||||
Sbjct: 28379295 agaattttgaaaccaattcaaagggggttgagattttctggaagagttggctgcctaggg 28379236

                                            
Query: 307      agggcactcccaccaaggcagcgctttt 334
                |||||||| ||||||||||||| |||||
Sbjct: 28379235 agggcactgccaccaaggcagcactttt 28379208



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 217      agatggcgcccaagggaatccagatggaagag 248
                ||||||| ||||||||||||||||||||||||
Sbjct: 28379656 agatggctcccaagggaatccagatggaagag 28379625

>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0519D04
          Length = 193068

 Score =  168 bits (85), Expect = 7e-39
 Identities = 121/133 (90%)
 Strand = Plus / Minus

                                                                         
Query: 86    gccgaggctggagggcgccagcgaggagctgagggccgcggcggcgcagagcctcgactg 145
             |||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 95370 gccgaggctggagggcgcgagcgaggagctgagggccgccgcggcgcagtgcctcgactg 95311

                                                                         
Query: 146   ggcgccggcgcgccggcgcgtgagcgcggccttcgcgcccgtgctccccacgctcgacca 205
             ||| || |||||||| |||||| |||  ||||||||||| ||||||||||| ||||||||
Sbjct: 95310 ggcccccgcgcgccgccgcgtgcgcggcgccttcgcgcctgtgctccccaccctcgacca 95251

                          
Query: 206   ctggctgttcaag 218
             ||| |||||||||
Sbjct: 95250 ctgcctgttcaag 95238



 Score =  111 bits (56), Expect = 1e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 247   agaattttgagaccaactcacagggagttgaaatattctggaagagttggctgcctaggg 306
             |||||||||| ||||| ||| |||| ||||| || |||||||||||||||||||||||||
Sbjct: 94395 agaattttgaaaccaattcaaagggggttgagattttctggaagagttggctgcctaggg 94336

                                         
Query: 307   agggcactcccaccaaggcagcgctttt 334
             |||||||| ||||||||||||| |||||
Sbjct: 94335 agggcactgccaccaaggcagcactttt 94308



 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 217   agatggcgcccaagggaatccagatggaagag 248
             ||||||| ||||||||||||||||||||||||
Sbjct: 94756 agatggctcccaagggaatccagatggaagag 94725

>ref|NM_192110.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 885

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 217 agatggcgcccaagggaatccagatggaagag 248
           ||||||| ||||||||||||||||||||||||
Sbjct: 330 agatggctcccaagggaatccagatggaagag 361

>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence
          Length = 157481

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 116    gagggccgcggcggcgcagagcc 138
              |||||||||||||||||||||||
Sbjct: 121039 gagggccgcggcggcgcagagcc 121061

>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence
          Length = 199487

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    gccggggcgccgcgggcgggg 38
             |||||||||||||||||||||
Sbjct: 23192 gccggggcgccgcgggcgggg 23212

>gb|AF083108.2|AF083108 Homo sapiens sirtuin type 3 (SIRT3) mRNA, complete cds
          Length = 1869

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 18 gccggggcgccgcgggcgggg 38
          |||||||||||||||||||||
Sbjct: 35 gccggggcgccgcgggcgggg 55

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 165     gtgagcgcggccttcgcgcccgtgc 189
               |||||| ||||||||||||||||||
Sbjct: 3870669 gtgagcacggccttcgcgcccgtgc 3870693



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 146     ggcgccggcgcgccggcgcgt 166
               |||||||||||||||||||||
Sbjct: 3061685 ggcgccggcgcgccggcgcgt 3061665



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 146     ggcgccggcgcgccggcgcg 165
               ||||||||||||||||||||
Sbjct: 4689971 ggcgccggcgcgccggcgcg 4689990



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    ggcgccggcgcgccggcgcg 165
              ||||||||||||||||||||
Sbjct: 155493 ggcgccggcgcgccggcgcg 155474

>dbj|AP006566.1| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-427I16, complete
           sequence
          Length = 24220

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 18  gccggggcgccgcgggcgggg 38
           |||||||||||||||||||||
Sbjct: 215 gccggggcgccgcgggcgggg 195

>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete
              sequence
          Length = 212874

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    gggcactcccaccaaggcagc 328
              |||||||||||||||||||||
Sbjct: 134951 gggcactcccaccaaggcagc 134971

>emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chromosome 12, complete
            sequence
          Length = 193155

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 244  aagagaattttgagaccaact 264
            |||||||||||||||||||||
Sbjct: 3769 aagagaattttgagaccaact 3749

>gb|AF015416.1|AF015416 Homo sapiens chromosome 11 from 11p15.5 region, complete sequence
          Length = 95038

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    gccggggcgccgcgggcgggg 38
             |||||||||||||||||||||
Sbjct: 20967 gccggggcgccgcgggcgggg 20947

>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
             sequence
          Length = 208848

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 244   aagagaattttgagaccaact 264
             |||||||||||||||||||||
Sbjct: 13147 aagagaattttgagaccaact 13167

>gb|U73637.1|HSU73637 Human chromosome 11 168h3 cosmid, complete sequence
          Length = 35976

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    gccggggcgccgcgggcgggg 38
             |||||||||||||||||||||
Sbjct: 20959 gccggggcgccgcgggcgggg 20939

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cgcgccggcgcgtgagcgcg 173
               ||||||||||||||||||||
Sbjct: 2517843 cgcgccggcgcgtgagcgcg 2517862

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 154     cgcgccggcgcgtgagcgcg 173
               ||||||||||||||||||||
Sbjct: 3666803 cgcgccggcgcgtgagcgcg 3666784

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gcggcggcgcagagcctcga 142
              ||||||||||||||||||||
Sbjct: 660123 gcggcggcgcagagcctcga 660104

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gcggcggcgcagagcctcga 142
              ||||||||||||||||||||
Sbjct: 673903 gcggcggcgcagagcctcga 673884

>ref|XM_844146.1| PREDICTED: Canis familiaris similar to SRY (sex determining region
            Y)-box 1 (LOC607464), mRNA
          Length = 1212

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ggccgcggcggcgcagagcc 138
            ||||||||||||||||||||
Sbjct: 1116 ggccgcggcggcgcagagcc 1135

>gb|AC117200.3| Mus musculus BAC clone RP23-164N7 from 3, complete sequence
          Length = 220758

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   atggaagagaattttgagac 259
             ||||||||||||||||||||
Sbjct: 13806 atggaagagaattttgagac 13825

>emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on chromosome 10 Contains part
              of the gene for VPS10 domain receptor protein SORCS 3
              (SORCS3), complete sequence
          Length = 149248

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     cgttgccgaggctggagggc 101
              ||||||||||||||||||||
Sbjct: 106499 cgttgccgaggctggagggc 106480

>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     gtgagcgcggccttcgcgcc 184
               ||||||||||||||||||||
Sbjct: 1192313 gtgagcgcggccttcgcgcc 1192332

>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    ggcgccggcgcgccggcgcg 165
              ||||||||||||||||||||
Sbjct: 188291 ggcgccggcgcgccggcgcg 188272

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 154     cgcgccggcgcgtgagcgcg 173
               ||||||||||||||||||||
Sbjct: 3407914 cgcgccggcgcgtgagcgcg 3407895

>dbj|AK137946.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130043G07 product:hypothetical protein,
            full insert sequence
          Length = 2584

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  atggaagagaattttgagac 259
            ||||||||||||||||||||
Sbjct: 1136 atggaagagaattttgagac 1117

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     ctgggcgccggcgcgccggc 162
               ||||||||||||||||||||
Sbjct: 1558699 ctgggcgccggcgcgccggc 1558718

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 152      ggcgcgccggcgcgtgagcg 171
                ||||||||||||||||||||
Sbjct: 26991203 ggcgcgccggcgcgtgagcg 26991222

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 146     ggcgccggcgcgccggcgcgtgag 169
               |||| |||||||||||||||||||
Sbjct: 4848888 ggcggcggcgcgccggcgcgtgag 4848865

>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
             chivosazol biosynthetic gene cluster, complete sequence;
             and hypothetical protein gene, complete cds
          Length = 96547

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 139   tcgactgggcgccggcgcgccggcgcgt 166
             ||||| ||||||||| ||||||||||||
Sbjct: 69815 tcgaccgggcgccggggcgccggcgcgt 69788

>dbj|AB092842.1| Gallus gallus gene for SOX2, complete cds
          Length = 49148

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 170   cgcggccttcgcgcccgtgctccccacg 197
             |||||||||||| ||||| |||||||||
Sbjct: 23817 cgcggccttcgcccccgttctccccacg 23844

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cgcgccggcgcgtgagcgcg 173
               ||||||||||||||||||||
Sbjct: 1440877 cgcgccggcgcgtgagcgcg 1440896

>gb|AC140380.3| Mus musculus BAC clone RP23-175B15 from 3, complete sequence
          Length = 206396

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   atggaagagaattttgagac 259
             ||||||||||||||||||||
Sbjct: 29037 atggaagagaattttgagac 29018

>dbj|AB029444.1| Leishmania mexicana amazonensis de novo pyrimidine biosynthesis gene
            cluster (pyr1, pyr3, Histone H3.1, Histone H3.2, pyr6-5,
            pyr2, pyr4 genes), complete cds
          Length = 26928

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  cggcggcgcagagcctcgac 143
            ||||||||||||||||||||
Sbjct: 8726 cggcggcgcagagcctcgac 8745


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,686,460
Number of Sequences: 3902068
Number of extensions: 2686460
Number of successful extensions: 66207
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63881
Number of HSP's gapped (non-prelim): 2326
length of query: 334
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 312
effective length of database: 17,147,199,772
effective search space: 5349926328864
effective search space used: 5349926328864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)