ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart06d11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgctccgcaagggcatgtcca 153 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 20743347 cgcggcggctgtggcacgtggtgcgcgccgtgctgttcatgctgcgcaagggcatgtcca 20743288 Query: 154 agcggaagctgtccatggatctccagctcctcctccaccgcggcaagatcgccggcaa 211 |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 20743287 agcggaagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 20743230 Score = 129 bits (65), Expect = 9e-27 Identities = 122/140 (87%), Gaps = 6/140 (4%) Strand = Plus / Minus Query: 304 gccgcgccctcgaccccgcgctcgcc---tacgacacgcgcggcgccggccgcgaggtgg 360 ||||||| |||||||| ||||||||| |||||| ||||||||||||||| ||||||| Sbjct: 20743107 gccgcgcgctcgacccggcgctcgccgtctacgacccgcgcggcgccggcctggaggtgg 20743048 Query: 361 agttcagctgcagcaacaccccgtcctacc---catccatccnactcatccccaccaagc 417 |||||||||||||||||||||| ||||||| | || ||| |||||||||||||||| Sbjct: 20743047 agttcagctgcagcaacaccccctcctacccgtcgtcgttccatctcatccccaccaagc 20742988 Query: 418 gtcgccgccgcaacaacaac 437 | |||||||||||||||||| Sbjct: 20742987 gccgccgccgcaacaacaac 20742968
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Minus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgctccgcaagggcatgtcca 153 ||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 165754 cgcggcggctgtggcacgtggtgcgcgccgtgctgttcatgctgcgcaagggcatgtcca 165695 Query: 154 agcggaagctgtccatggatctccagctcctcctccaccgcggcaagatcgccggcaa 211 |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 165694 agcggaagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 165637 Score = 129 bits (65), Expect = 9e-27 Identities = 122/140 (87%), Gaps = 6/140 (4%) Strand = Plus / Minus Query: 304 gccgcgccctcgaccccgcgctcgcc---tacgacacgcgcggcgccggccgcgaggtgg 360 ||||||| |||||||| ||||||||| |||||| ||||||||||||||| ||||||| Sbjct: 165514 gccgcgcgctcgacccggcgctcgccgtctacgacccgcgcggcgccggcctggaggtgg 165455 Query: 361 agttcagctgcagcaacaccccgtcctacc---catccatccnactcatccccaccaagc 417 |||||||||||||||||||||| ||||||| | || ||| |||||||||||||||| Sbjct: 165454 agttcagctgcagcaacaccccctcctacccgtcgtcgttccatctcatccccaccaagc 165395 Query: 418 gtcgccgccgcaacaacaac 437 | |||||||||||||||||| Sbjct: 165394 gccgccgccgcaacaacaac 165375
>ref|XM_464776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 131 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 179 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 326 gccgcgaggtcgagttcagctgcagcaacac 356 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 50 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 92 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 263 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 299
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 7299815 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 7299863 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 7300010 gccgcgaggtcgagttcagctgcagcaacac 7300040 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 7299734 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 7299776 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 10853727 cgatggagccgagcatggcgcc 10853706 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 7299947 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 7299983 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 27666405 gcgccgcgcactcgaacccgcgctcgcc 27666432 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gacgccgccgccgacgtcgc 297 |||||||||||||||||||| Sbjct: 4420573 gacgccgccgccgacgtcgc 4420592
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 166 ccatggatctccagctcctcctccaccgcggcaagatcgccggcaaggc 214 ||||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 75623 ccatggacctccacctcctcctccgccgcggcaagatcgccggcaaggc 75671 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 349 gccgcgaggtggagttcagctgcagcaacac 379 |||||||||| |||||||||||||||||||| Sbjct: 75818 gccgcgaggtcgagttcagctgcagcaacac 75848 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 94 cgcggaggctatggcacgtggtgcgcgccgtgctgttcatgct 136 ||||| |||| |||| |||||||||||||||||||| |||||| Sbjct: 75542 cgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgct 75584 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 292 cgtcgctgtcgcgccgcgccctcgaccccgcgctcgc 328 ||||||||||| |||||| | ||||||| |||||||| Sbjct: 75755 cgtcgctgtcgtgccgcggcatcgacccggcgctcgc 75791
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 419 tcgccgccgcaacaacaaccgccgc 443 ||||||||||||||||||||||||| Sbjct: 94466 tcgccgccgcaacaacaaccgccgc 94490
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaac 377 |||||| |||| |||||||||||||||||| | ||||||| Sbjct: 131857 gcgcggtgccgaccgcgaggtggagttcagttacagcaac 131818
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaac 377 |||||| |||| |||||||||||||||||| | ||||||| Sbjct: 81469 gcgcggtgccgaccgcgaggtggagttcagttacagcaac 81430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 338 gcgcggcgccggccgcgaggtggagttcagctgcagcaac 377 |||||| |||| |||||||||||||||||| | ||||||| Sbjct: 20243197 gcgcggtgccgaccgcgaggtggagttcagttacagcaac 20243158 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 6211243 tcctcctcggccgcggcaagctcgccggcaaggc 6211210 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 22653468 gcctacgacgcgcgcggcgccggc 22653491 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 6211100 gaggtggagttcagctgcaccaccacgccgtc 6211069
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 194 cggcaagatcgccggcaaggccct 217 |||||||||||||||||||||||| Sbjct: 5834310 cggcaagatcgccggcaaggccct 5834333
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgc 324 ||||||||||||||||||||||| Sbjct: 15455 gcgccgcgccctcgaccccgcgc 15477
>ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 137 tcctcctcggccgcggcaagctcgccggcaaggc 170 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 280 gaggtggagttcagctgcaccaccacgccgtc 311
>ref|XM_465000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 277 cgatggagccgagcatggcgcc 256
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 41598 tcctcctcggccgcggcaagctcgccggcaaggc 41565 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 41455 gaggtggagttcagctgcaccaccacgccgtc 41424
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 cgatggagccgagcatggcgcc 94 |||||||||||||||||||||| Sbjct: 59926 cgatggagccgagcatggcgcc 59905
>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full insert sequence Length = 853 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 314 tcctcctcggccgcggcaagctcgccggcaaggc 281 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 171 gaggtggagttcagctgcaccaccacgccgtc 140
>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full insert sequence Length = 1272 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 tcctcctccaccgcggcaagatcgccggcaaggc 214 |||||||| |||||||||| ||||||||||||| Sbjct: 321 tcctcctcggccgcggcaagctcgccggcaaggc 354 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 354 gaggtggagttcagctgcagcaacaccccgtc 385 ||||||||||||||||||| || ||| ||||| Sbjct: 464 gaggtggagttcagctgcaccaccacgccgtc 495
>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds Length = 193824 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 tctctctcactcctcagtcctc 61 |||||||||||||||||||||| Sbjct: 27138 tctctctcactcctcagtcctc 27117
>ref|NM_188264.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 283 gtggagttcagctgcaccaccacgccgtcctac 315
>ref|XM_471569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 279 acgccgccgccgacgtcgctgtcgcgccgcgccctcg 315 ||||||||| || ||||||||||||||||||| |||| Sbjct: 169 acgccgccgtcg-cgtcgctgtcgcgccgcgcgctcg 134
>ref|NM_196326.1| Oryza sativa (japonica cultivar-group) putative stress enhanced protein (OSJNBa0011L09.1), mRNA Length = 446 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 300 cggcgacgaagccgagcatggcgccgcgg 272
>gb|AY568293.1| Crithidia fasciculata paraflagellar rod protein (PFR2) mRNA, complete cds Length = 2632 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1728 atctccagctcctcctccacc 1708
>ref|XM_809076.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein (Tc00.1047053511215.119) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1538 atctccagctcctcctccacc 1518
>ref|XM_797553.1| Trypanosoma cruzi strain CL Brener paraxonemal rod protein PAR2 (Tc00.1047053434931.10) partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 530 atctccagctcctcctccacc 510
>ref|XM_802852.1| Trypanosoma cruzi strain CL Brener 69 kDa paraflagellar rod protein (Tc00.1047053508961.79) partial mRNA Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 815 atctccagctcctcctccacc 795
>gb|AY225601.1|AY225601S1 Streptomyces vinaceus strain ATCC 11861 viomycin biosynthesis gene cluster, 5' fragment Length = 3272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ccgcgccctcgaccccgcgct 325 ||||||||||||||||||||| Sbjct: 1994 ccgcgccctcgaccccgcgct 2014
>gb|AY263398.1| Streptomyces vinaceus strain ATCC 11861 viomycin biosynthetic gene cluster, complete sequence Length = 36401 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ccgcgccctcgaccccgcgct 325 ||||||||||||||||||||| Sbjct: 9225 ccgcgccctcgaccccgcgct 9245
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24, complete sequence Length = 132465 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 279 acgccgccgccgacgtcgctgtcgcgccgcgccctcg 315 ||||||||| || ||||||||||||||||||| |||| Sbjct: 85217 acgccgccgtcg-cgtcgctgtcgcgccgcgcgctcg 85182
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 39860 cggcgacgaagccgagcatggcgccgcgg 39888
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 20141 cggcgacgaagccgagcatggcgccgcgg 20113
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 420 cgccgccgcaacaacaaccgccgca 444 ||||||||||||| ||||||||||| Sbjct: 211967 cgccgccgcaacagcaaccgccgca 211943
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 279 acgccgccgccgacgtcgctgtcgcgccgcgccctcg 315 ||||||||| || ||||||||||||||||||| |||| Sbjct: 12411190 acgccgccgtcg-cgtcgctgtcgcgccgcgcgctcg 12411155
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 12743421 cggcgacgaagccgagcatggcgccgcgg 12743449 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gcggagacgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 15964105 gcggagacgccgccgccggcgtcg 15964128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 5352131 gtggagttcagctgcaccaccacgccgtcctac 5352099 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 agacgccgccgccgacgtcg 296 |||||||||||||||||||| Sbjct: 24016026 agacgccgccgccgacgtcg 24016007
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 103475 gtggagttcagctgcaccaccacgccgtcctac 103443
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 147382 gtggagttcagctgcaccaccacgccgtcctac 147350
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 275 ggagacgccgccgccgacgtcgctgtcgc 303 |||| ||||||||| |||||||||||||| Sbjct: 4236346 ggaggcgccgccgctgacgtcgctgtcgc 4236318 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 167723 gccgccgccgacgtcgctgt 167704
>dbj|AK108464.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D11, full insert sequence Length = 1103 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 357 gtggagttcagctgcagcaacaccccgtcctac 389 |||||||||||||||| || ||| ||||||||| Sbjct: 477 gtggagttcagctgcaccaccacgccgtcctac 509
>dbj|AK067046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L24, full insert sequence Length = 883 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 397 cggcgacgaagccgagcatggcgccgcgg 369
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatggcgccgcgg 98 |||||| | |||||||||||||||||||| Sbjct: 12750761 cggcgacgaagccgagcatggcgccgcgg 12750789 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gcggagacgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 15972346 gcggagacgccgccgccggcgtcg 15972369
>gb|U45884.1|LMU45884 Leishmania mexicana mexicana paraflagellar rod protein (PFR-2C) gene, complete cds Length = 5468 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 3129 atctccagctcctcctccacc 3109
>gb|M97548.1|TRBPAR2A Trypanosoma cruzi major paraflagellar rod protein (PAR2) mRNA, complete cds Length = 2057 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 atctccagctcctcctccacc 192 ||||||||||||||||||||| Sbjct: 1586 atctccagctcctcctccacc 1566
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cgcgctcgcctacgacacgcgcgg 343 |||||||||||||||| ||||||| Sbjct: 907410 cgcgctcgcctacgacgcgcgcgg 907433
>ref|XM_517650.1| PREDICTED: Pan troglodytes similar to KIAA0372 (LOC461746), mRNA Length = 6035 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 410 agttcagctgcagcaacacc 391
>ref|NM_196781.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0068N06.30), mRNA Length = 267 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gcggagacgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 73 gcggagacgccgccgccggcgtcg 96
>ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 agacgccgccgccgacgtcg 296 |||||||||||||||||||| Sbjct: 1387 agacgccgccgccgacgtcg 1368
>ref|XM_478587.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 882 cgccgccgccgacgtcgctg 863
>ref|XM_530154.1| PREDICTED: Pan troglodytes LOC457125 (LOC457125), mRNA Length = 804 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 515 tccagctcctcctccaccgc 534
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 66006 gcctacgacgcgcgcggcgccggc 66029
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 319 ccgcgctcgcctacgacacgcgcggcgccggc 350 |||||||| ||||||||| | ||||||||||| Sbjct: 59325 ccgcgctctcctacgacaggggcggcgccggc 59294
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 tcctccaccgcggcaagatcgccg 207 |||||||||||||| ||||||||| Sbjct: 1917087 tcctccaccgcggcgagatcgccg 1917064
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 aaaacccaacaccaccaaagcattccca 30 |||||| ||||||||||| ||||||||| Sbjct: 27857 aaaaccaaacaccaccaaggcattccca 27884
>ref|XM_610891.2| PREDICTED: Bos taurus similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) (LOC532376), mRNA Length = 3301 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 806 ccaccaagcgtcgccgccgc 825
>ref|XM_954460.1| Neurospora crassa OR74A hypothetical protein (NCU06091.1) partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 70 cgccgccgccgacgtcgctg 51
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcctacgacacgcgcggcgccggc 350 ||||||||| |||||||||||||| Sbjct: 8667 gcctacgacgcgcgcggcgccggc 8690
>ref|XM_325945.1| Neurospora crassa OR74A hypothetical protein (NCU06091.1) partial mRNA Length = 1050 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 70 cgccgccgccgacgtcgctg 51
>gb|AC126424.12| Mus musculus chromosome 17, clone RP23-19K10, complete sequence Length = 182696 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ggagttcagctgcagcaaca 378 |||||||||||||||||||| Sbjct: 134554 ggagttcagctgcagcaaca 134535
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatg 89 |||||||||||||||||||| Sbjct: 14213 cggcgatggagccgagcatg 14232
>ref|NM_001010898.1| Homo sapiens solute carrier family 6, member 17 (SLC6A17), mRNA Length = 6420 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 645 tccagctcctcctccaccgc 626
>gb|AC135864.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0071K13, complete sequence Length = 176150 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatg 89 |||||||||||||||||||| Sbjct: 131039 cggcgatggagccgagcatg 131058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 9191251 gccgccgccgacgtcgctgt 9191270
>ref|XM_993739.1| PREDICTED: Mus musculus cDNA sequence AK129128 (AK129128), mRNA Length = 5001 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 158 agttcagctgcagcaacacc 139
>ref|XM_922094.2| PREDICTED: Mus musculus cDNA sequence AK129128, transcript variant 5 (AK129128), mRNA Length = 5781 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 538 agttcagctgcagcaacacc 519
>ref|XM_898433.2| PREDICTED: Mus musculus cDNA sequence AK129128, transcript variant 2 (AK129128), mRNA Length = 5381 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 538 agttcagctgcagcaacacc 519
>ref|XM_542997.2| PREDICTED: Canis familiaris similar to Transcription factor MafB (V-maf musculoaponeurotic fibrosarcoma oncogene homolog B) (LOC485873), mRNA Length = 1227 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 504 ccaccaagcgtcgccgccgc 523
>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence Length = 208096 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 10563 agttcagctgcagcaacacc 10582
>ref|XM_547368.2| PREDICTED: Canis familiaris similar to calmodulin regulated spectrin-associated protein 1-like 1 (LOC490247), mRNA Length = 7075 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccccgtcctacccatccatc 398 |||||||||||||||||||| Sbjct: 2878 ccccgtcctacccatccatc 2897
>gb|AC110238.10| Mus musculus chromosome 5, clone RP23-106D12, complete sequence Length = 197964 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 aaaacccaacaccaccaaagcattccca 30 |||||| ||||||||||| ||||||||| Sbjct: 25965 aaaaccaaacaccaccaaggcattccca 25938
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgccgccgacgtcgctgtcg 302 |||||||||||||||||||| Sbjct: 3718758 cgccgccgacgtcgctgtcg 3718739
>emb|AL355990.18| Human DNA sequence from clone RP5-1028L10 on chromosome 1 Contains the 5' end of gene LOC284462, two novel genes and a CpG island, complete sequence Length = 47338 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tccagctcctcctccaccgc 194 |||||||||||||||||||| Sbjct: 23650 tccagctcctcctccaccgc 23631
>emb|CR858787.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0439 (from clone DKFZp469C0439) Length = 2334 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 409 agttcagctgcagcaacacc 390
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgccgccgacgtcgctgtcg 302 |||||||||||||||||||| Sbjct: 3622432 cgccgccgacgtcgctgtcg 3622413
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gcggagacgccgccgccgacgtcg 296 |||||||||||||||||| ||||| Sbjct: 135629 gcggagacgccgccgccggcgtcg 135652
>gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, complete sequence Length = 172189 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggaagctgtccatggatctc 176 |||||||||||||||||||| Sbjct: 119349 ggaagctgtccatggatctc 119368
>dbj|AK134255.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930409B09 product:hypothetical TPR repeat/TPR-like/Protein prenyltransferase containing protein, full insert sequence Length = 1734 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 484 agttcagctgcagcaacacc 465
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 95140 gccgccgccgacgtcgctgt 95121
>dbj|AK164627.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430042C19 product:hypothetical TPR repeat/TPR-like containing protein, full insert sequence Length = 2619 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 539 agttcagctgcagcaacacc 520
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 cggcaagatcgccggcaagg 213 |||||||||||||||||||| Sbjct: 2800983 cggcaagatcgccggcaagg 2801002
>gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR05A08, complete sequence Length = 169581 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 149065 caagcgtcgccgccgcaaca 149084
>ref|NM_059321.2| Caenorhabditis elegans B0207.1 (B0207.1) mRNA, complete cds Length = 1695 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tctccagctcctcctccacc 192 |||||||||||||||||||| Sbjct: 430 tctccagctcctcctccacc 449
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 131879 caagcgtcgccgccgcaaca 131898
>gb|DQ054802.1| Ovis aries v-maf musculoaponeurotic fibrosarcoma oncogene protein B (MafB) mRNA, partial cds Length = 414 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ccaccaagcgtcgccgccgc 428 |||||||||||||||||||| Sbjct: 34 ccaccaagcgtcgccgccgc 53
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatg 89 |||||||||||||||||||| Sbjct: 15021252 cggcgatggagccgagcatg 15021271
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 21302192 cgccgccgccgacgtcgctg 21302211
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 9189084 gccgccgccgacgtcgctgt 9189103
>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR09L14, complete sequence Length = 167368 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 caagcgtcgccgccgcaaca 432 |||||||||||||||||||| Sbjct: 41699 caagcgtcgccgccgcaaca 41718
>ref|XM_226606.3| PREDICTED: Rattus norvegicus similar to KIAA0372 gene product (predicted) (LOC294595), mRNA Length = 4602 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 197 agttcagctgcagcaacacc 178
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 146074 gcgccgcgcactcgaacccgcgctcgcc 146101
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gacgccgccgccgacgtcgc 297 |||||||||||||||||||| Sbjct: 104137 gacgccgccgccgacgtcgc 104156
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 agacgccgccgccgacgtcg 296 |||||||||||||||||||| Sbjct: 130548 agacgccgccgccgacgtcg 130529
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 22360 cgccgccgccgacgtcgctg 22379
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 cgccgccgccgacgtcgctg 299 |||||||||||||||||||| Sbjct: 88477 cgccgccgccgacgtcgctg 88496
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gcgccgcgccctcgaccccgcgctcgcc 329 ||||||||| ||||| |||||||||||| Sbjct: 52271 gcgccgcgcactcgaacccgcgctcgcc 52298
>gb|U97196.2| Caenorhabditis elegans cosmid B0207, complete sequence Length = 55984 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tctccagctcctcctccacc 192 |||||||||||||||||||| Sbjct: 46485 tctccagctcctcctccacc 46504
>dbj|AK070697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058P13, full insert sequence Length = 1667 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cggcgatggagccgagcatg 89 |||||||||||||||||||| Sbjct: 1310 cggcgatggagccgagcatg 1291
>dbj|AK060769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B01, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 gccgccgccgacgtcgctgt 300 |||||||||||||||||||| Sbjct: 160 gccgccgccgacgtcgctgt 179
>emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chromosome 17, complete sequence Length = 268616 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ggagttcagctgcagcaaca 378 |||||||||||||||||||| Sbjct: 220085 ggagttcagctgcagcaaca 220066
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cggcgatggagccgagcatg 89 |||||||||||||||||||| Sbjct: 15102947 cggcgatggagccgagcatg 15102966
>gb|AC156981.13| Mus musculus chromosome 18, clone RP23-145E3, complete sequence Length = 210762 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tctctcactcctcagtcctc 61 |||||||||||||||||||| Sbjct: 34407 tctctcactcctcagtcctc 34426
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 agttcagctgcagcaacacc 380 |||||||||||||||||||| Sbjct: 46386 agttcagctgcagcaacacc 46367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,036,692 Number of Sequences: 3902068 Number of extensions: 4036692 Number of successful extensions: 115529 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112681 Number of HSP's gapped (non-prelim): 2848 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
