ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart06d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 168 bits (85), Expect = 1e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 202 tggacgcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtaca 261 ||||||| |||||||||||| ||||||||||| ||||| |||||| |||||||||||| Sbjct: 71 tggacgcctgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtaca 130 Query: 262 gaggggacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgccc 321 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131 gaggggacacccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccg 190 Query: 322 tctgcgccaggcaggccgcg 341 |||||| |||||||||||| Sbjct: 191 cctgcgcgaggcaggccgcg 210
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 168 bits (85), Expect = 1e-38 Identities = 126/140 (90%) Strand = Plus / Minus Query: 202 tggacgcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtaca 261 ||||||| |||||||||||| ||||||||||| ||||| |||||| |||||||||||| Sbjct: 100867 tggacgcctgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtaca 100808 Query: 262 gaggggacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgccc 321 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100807 gaggggacacccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccg 100748 Query: 322 tctgcgccaggcaggccgcg 341 |||||| |||||||||||| Sbjct: 100747 cctgcgcgaggcaggccgcg 100728 Score = 131 bits (66), Expect = 2e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 147 gcctgctccttcttcttcgatgccgagctgcttggcgagcccggcatgccggcaatggac 206 |||||| | ||||||||||| ||||||| | | ||||||| |||| || || ||||| Sbjct: 97367 gcctgcgctttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggac 97308 Query: 207 gcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtacagaggg 266 || |||||||||||| |||||| ||| || | ||||||||| |||||||||||| ||| Sbjct: 97307 gcctgcgcgctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggg 97248 Query: 267 gacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgc 319 |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 97247 gacacgcccttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 97195 Score = 58.0 bits (29), Expect = 3e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgccgccnggagcagat 307 |||||| |||| |||||||||||||||||||||| | | ||||||||| Sbjct: 86623 cagaggtgacatgcccttctgcagcgaggagtgcaggcaggagcagat 86576 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 267 gacacgcccttctgcagcgaggagtgc 293 |||||||| |||||||||||||||||| Sbjct: 82689 gacacgccgttctgcagcgaggagtgc 82663
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 168 bits (85), Expect = 1e-38 Identities = 126/140 (90%) Strand = Plus / Minus Query: 202 tggacgcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtaca 261 ||||||| |||||||||||| ||||||||||| ||||| |||||| |||||||||||| Sbjct: 29598178 tggacgcctgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtaca 29598119 Query: 262 gaggggacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgccc 321 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 29598118 gaggggacacccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccg 29598059 Query: 322 tctgcgccaggcaggccgcg 341 |||||| |||||||||||| Sbjct: 29598058 cctgcgcgaggcaggccgcg 29598039 Score = 131 bits (66), Expect = 2e-27 Identities = 146/173 (84%) Strand = Plus / Minus Query: 147 gcctgctccttcttcttcgatgccgagctgcttggcgagcccggcatgccggcaatggac 206 |||||| | ||||||||||| ||||||| | | ||||||| |||| || || ||||| Sbjct: 29594678 gcctgcgctttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggac 29594619 Query: 207 gcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtacagaggg 266 || |||||||||||| |||||| ||| || | ||||||||| |||||||||||| ||| Sbjct: 29594618 gcctgcgcgctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggg 29594559 Query: 267 gacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgc 319 |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 29594558 gacacgcccttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 29594506 Score = 58.0 bits (29), Expect = 3e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgccgccnggagcagat 307 |||||| |||| |||||||||||||||||||||| | | ||||||||| Sbjct: 29583934 cagaggtgacatgcccttctgcagcgaggagtgcaggcaggagcagat 29583887 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 267 gacacgcccttctgcagcgaggagtgc 293 |||||||| |||||||||||||||||| Sbjct: 29580000 gacacgccgttctgcagcgaggagtgc 29579974
>dbj|AK120315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L24, full insert sequence Length = 636 Score = 168 bits (85), Expect = 1e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 202 tggacgcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtaca 261 ||||||| |||||||||||| ||||||||||| ||||| |||||| |||||||||||| Sbjct: 73 tggacgcctgcgcgctctgcaccaagccgctgcgccgcgatagcgacatcttcatgtaca 132 Query: 262 gaggggacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgccc 321 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 133 gaggggacacccccttctgcagcgaggagtgccgctacgagcagatgcacctcgacgccg 192 Query: 322 tctgcgccaggcaggccgcg 341 |||||| |||||||||||| Sbjct: 193 cctgcgcgaggcaggccgcg 212
>ref|XM_473679.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 294 Score = 131 bits (66), Expect = 2e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 147 gcctgctccttcttcttcgatgccgagctgcttggcgagcccggcatgccggcaatggac 206 |||||| | ||||||||||| ||||||| | | ||||||| |||| || || ||||| Sbjct: 16 gcctgcgctttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggac 75 Query: 207 gcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtacagaggg 266 || |||||||||||| |||||| ||| || | ||||||||| |||||||||||| ||| Sbjct: 76 gcctgcgcgctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggg 135 Query: 267 gacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgc 319 |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 136 gacacgcccttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 188
>dbj|AK063206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D01, full insert sequence Length = 727 Score = 131 bits (66), Expect = 2e-27 Identities = 146/173 (84%) Strand = Plus / Plus Query: 147 gcctgctccttcttcttcgatgccgagctgcttggcgagcccggcatgccggcaatggac 206 |||||| | ||||||||||| ||||||| | | ||||||| |||| || || ||||| Sbjct: 104 gcctgcgctttcttcttcgacgccgagccggtgggcgagcagggcaggcacgcgctggac 163 Query: 207 gcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtacagaggg 266 || |||||||||||| |||||| ||| || | ||||||||| |||||||||||| ||| Sbjct: 164 gcctgcgcgctctgcaccaagcagctcacgagggacagcgacatcttcatgtacaagggg 223 Query: 267 gacacgcccttctgcagcgaggagtgccgccnggagcagatgcacctcgacgc 319 |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 224 gacacgcccttctgcagcgaggagtgccgctacgagcagatgcagctcgacgc 276
>gb|AY109649.1| Zea mays CL122_1 mRNA sequence Length = 3177 Score = 115 bits (58), Expect = 1e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 202 tggacgcgtgcgcgctctgcgccaagccgctggcgcgcgacagcgacgtcttcatgtaca 261 ||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||| Sbjct: 2661 tggacgcctgcgcgctctgcgccaagccgctgggacgcgactgcgacatcttcatgtaca 2720 Query: 262 gaggggacacgcccttct 279 |||||||||||||||||| Sbjct: 2721 gaggggacacgcccttct 2738
>ref|XM_467198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 91.7 bits (46), Expect = 2e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccnggagc 303 ||||| ||||||||||||||||||||||||| |||||||||||||||||| | | ||||| Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgcaggcgggagc 384 Query: 304 agatg 308 ||||| Sbjct: 385 agatg 389
>dbj|AK111294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-A08, full insert sequence Length = 770 Score = 91.7 bits (46), Expect = 2e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccnggagc 303 ||||| ||||||||||||||||||||||||| |||||||||||||||||| | | ||||| Sbjct: 325 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgcaggcgggagc 384 Query: 304 agatg 308 ||||| Sbjct: 385 agatg 389
>ref|XM_467200.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1034 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
>dbj|AK071055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077C02, full insert sequence Length = 1034 Score = 83.8 bits (42), Expect = 4e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gcgacatcttcatgtacagaggggacacgccgttctgcagcgaggagtgc 467
>ref|XM_467202.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccg 295 ||||| ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
>ref|XM_473678.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 384 Score = 79.8 bits (40), Expect = 7e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccngg 300 |||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | | || Sbjct: 206 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgcaggcagg 265 Query: 301 agcagat 307 ||||||| Sbjct: 266 agcagat 272
>dbj|AK060089.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H12, full insert sequence Length = 1044 Score = 79.8 bits (40), Expect = 7e-12 Identities = 60/67 (89%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgccngg 300 |||| ||| |||||||||||||||| |||| |||||||||||||||||||||| | | || Sbjct: 441 acagagacatcttcatgtacagaggtgacatgcccttctgcagcgaggagtgcaggcagg 500 Query: 301 agcagat 307 ||||||| Sbjct: 501 agcagat 507
>dbj|AK059947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H10, full insert sequence Length = 972 Score = 79.8 bits (40), Expect = 7e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 244 gcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccg 295 ||||| ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 214 gcgacatcttcatgtacagagggaacacgccattctgcagcgaggagtgccg 265
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgccgccnggagcagatg 308 ||||||||||||||| |||||||||||||||||| | | |||||||||| Sbjct: 28151680 cagaggggacacgccgttctgcagcgaggagtgcaggcgggagcagatg 28151632 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||||||||| |||||||||||||||||| Sbjct: 28155440 cagaggggacacgccgttctgcagcgaggagtgc 28155407 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 259 acagaggggacacgcccttctgcagcgaggagtgccg 295 |||||||| ||||||| |||||||||||||||||||| Sbjct: 28172525 acagagggaacacgccattctgcagcgaggagtgccg 28172489 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgc 293 |||||| ||||| || |||||||||||||||||| Sbjct: 28162852 cagaggcgacaccccgttctgcagcgaggagtgc 28162819 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ccaccgtgggcagcggcggt 396 |||||||||||||||||||| Sbjct: 9803399 ccaccgtgggcagcggcggt 9803380 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 924712 ggccgcgcggaggcagcagc 924693
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 67.9 bits (34), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgccgccnggagcagatg 308 ||||||||||||||| |||||||||||||||||| | | |||||||||| Sbjct: 141327 cagaggggacacgccgttctgcagcgaggagtgcaggcgggagcagatg 141279 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||||||||| |||||||||||||||||| Sbjct: 145087 cagaggggacacgccgttctgcagcgaggagtgc 145054 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 259 acagaggggacacgcccttctgcagcgaggagtgccg 295 |||||||| ||||||| |||||||||||||||||||| Sbjct: 162172 acagagggaacacgccattctgcagcgaggagtgccg 162136 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 260 cagaggggacacgcccttctgcagcgaggagtgc 293 |||||| ||||| || |||||||||||||||||| Sbjct: 152499 cagaggcgacaccccgttctgcagcgaggagtgc 152466
>ref|XM_467201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 250 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 |||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 197 tcttcatgtacagaggcgacaccccgttctgcagcgaggagtgc 240
>ref|XM_473677.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 339 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 250 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 101 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 144
>dbj|AK070920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072B01, full insert sequence Length = 768 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 250 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 38 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 81
>dbj|AK064763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H07, full insert sequence Length = 872 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 250 tcttcatgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||||||| || |||||||| |||||||||||||||||| Sbjct: 259 tcttcatgtacaggggagacacgccgttctgcagcgaggagtgc 302
>ref|XM_473675.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 254 catgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||| ||||||| || |||||||||||||||||| Sbjct: 261 catgtacaggggggacattccgttctgcagcgaggagtgc 300
>dbj|AK071528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102E22, full insert sequence Length = 806 Score = 48.1 bits (24), Expect = 0.024 Identities = 59/71 (83%) Strand = Plus / Plus Query: 238 gcgacagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgcc 297 ||||| ||||| ||||||||||||||||||| | | ||||||||||| || ||| | | Sbjct: 367 gcgaccgcgacatcttcatgtacagaggggatgcagcgttctgcagcgacgactgcaggc 426 Query: 298 nggagcagatg 308 |||||||||| Sbjct: 427 aggagcagatg 437
>dbj|AK061584.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B04, full insert sequence Length = 1079 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 254 catgtacagaggggacacgcccttctgcagcgaggagtgc 293 ||||||||| ||||||| || |||||||||||||||||| Sbjct: 460 catgtacaggggggacattccgttctgcagcgaggagtgc 499
>dbj|AK059793.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E07, full insert sequence Length = 938 Score = 48.1 bits (24), Expect = 0.024 Identities = 59/71 (83%) Strand = Plus / Plus Query: 238 gcgacagcgacgtcttcatgtacagaggggacacgcccttctgcagcgaggagtgccgcc 297 ||||| ||||| ||||||||||||||||||| | | ||||||||||| || ||| | | Sbjct: 372 gcgaccgcgacatcttcatgtacagaggggatgcagcgttctgcagcgacgactgcaggc 431 Query: 298 nggagcagatg 308 |||||||||| Sbjct: 432 aggagcagatg 442
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 386 gcagcggcggtccaggaaggtgc 408 ||||||||||||||||||||||| Sbjct: 5633013 gcagcggcggtccaggaaggtgc 5633035 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 tcgatgccgagctgcttggcgagc 186 ||||||||||||| |||||||||| Sbjct: 6239508 tcgatgccgagcttcttggcgagc 6239485
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 cgatgccgagctgcttggcgag 185 |||||||||||||||||||||| Sbjct: 3370135 cgatgccgagctgcttggcgag 3370156 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 294 cgccnggagcagatgcacctcgacgcc 320 |||| |||||||||||||| ||||||| Sbjct: 3613572 cgcctggagcagatgcaccccgacgcc 3613546
>gb|AC159423.1| Trypanosoma brucei chromosome 8 clone RPCI93-26E13, complete sequence Length = 147087 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 33 cgcagcagcagcaccaaaatcagcaa 58 ||||||||||||||||| |||||||| Sbjct: 80946 cgcagcagcagcaccaacatcagcaa 80971
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 33 cgcagcagcagcaccaaaatcagcaa 58 ||||||||||||||||| |||||||| Sbjct: 1698680 cgcagcagcagcaccaacatcagcaa 1698705
>gb|AY596534.1| Saccharum officinarum clone SCJLLR1104A08, complete sequence Length = 1065 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 254 catgtacagaggggacacgcccttctgcagcgaggagtgccg 295 |||||||||||| ||| | | |||||||||||||||||||| Sbjct: 372 catgtacagaggcgaccgggcgttctgcagcgaggagtgccg 413
>ref|XM_818987.1| Trypanosoma brucei TREU927 clone RPCI93-26E13 hypothetical protein (Tb927.8.5750) partial mRNA Length = 2637 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 33 cgcagcagcagcaccaaaatcagcaa 58 ||||||||||||||||| |||||||| Sbjct: 134 cgcagcagcagcaccaacatcagcaa 159
>ref|XM_797067.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509833.10) partial mRNA Length = 548 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 ccgcagcagcagcaccaaaatcagca 57 |||||||||||||| ||||||||||| Sbjct: 60 ccgcagcagcagcagcaaaatcagca 85
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 106406 gcagcagcagcaccaaaatcag 106427
>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177583 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 2607 gcagcagcagcaccaaaatcag 2586
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 88348 gcagcagcagcaccaaaatcag 88327
>ref|NM_139375.1| Drosophila melanogaster CG12105-RA (CG12105), mRNA Length = 5908 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 2170 gcagcagcagcaccaaaatcag 2191
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete sequence Length = 303191 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 79735 gcagcagcagcaccaaaatcag 79714
>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones DS02777, DS03222, DS02345, and DS04808, complete sequence Length = 257867 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 2901 gcagcagcagcaccaaaatcag 2880
>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence Length = 140384 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 agccacctgcacatacacacat 128 |||||||||||||||||||||| Sbjct: 87683 agccacctgcacatacacacat 87704
>gb|DQ138937.1| Drosophila erecta voucher stock #14021-0224.0 CG12105 gene, partial cds Length = 4194 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 834 gcagcagcagcaccaaaatcag 855
>gb|DQ138934.1| Drosophila simulans strain Ky-b CG12105 gene, partial cds Length = 4200 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 861 gcagcagcagcaccaaaatcag 882
>gb|DQ138932.1| Drosophila melanogaster strain Ral1 CG12105 gene, partial cds Length = 4161 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcag 55 |||||||||||||||||||||| Sbjct: 840 gcagcagcagcaccaaaatcag 861
>gb|BT012673.1| Drosophila melanogaster SD07102 full insert cDNA Length = 5488 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agcagcaccaaaatcagcaaa 59 ||||||||||||||||||||| Sbjct: 662 agcagcaccaaaatcagcaaa 682
>emb|AL161629.10| Human DNA sequence from clone RP11-406A20 on chromosome 9q21.33-22.2 Contains two novel genes and a interleukin 6 receptor (IL6R) pseudogene, complete sequence Length = 160341 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 cacctgcacatacacacatac 130 ||||||||||||||||||||| Sbjct: 40503 cacctgcacatacacacatac 40483
>ref|NM_140669.2| Drosophila melanogaster CG9715-RA (CG9715), mRNA Length = 5417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agcagcaccaaaatcagcaaa 59 ||||||||||||||||||||| Sbjct: 662 agcagcaccaaaatcagcaaa 682
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 agcagcaccaaaatcagcaaa 59 ||||||||||||||||||||| Sbjct: 70223 agcagcaccaaaatcagcaaa 70203
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 cacctgcacatacacacatac 130 ||||||||||||||||||||| Sbjct: 150967 cacctgcacatacacacatac 150947
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 gccgagctgcttggcgagcccggca 192 ||||||||||| ||||||||||||| Sbjct: 346564 gccgagctgctcggcgagcccggca 346588 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tcgatgccgagctgcttggcgagc 186 ||||||||||||| |||||||||| Sbjct: 3862572 tcgatgccgagctccttggcgagc 3862595
>ref|XM_552269.1| Anopheles gambiae str. PEST ENSANGP00000029273 (ENSANGG00000021709), partial mRNA Length = 351 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 cgcagcagcagcaccaaaatc 53 ||||||||||||||||||||| Sbjct: 216 cgcagcagcagcaccaaaatc 236
>ref|XM_552266.1| Anopheles gambiae str. PEST ENSANGP00000028812 (ENSANGG00000006547), partial mRNA Length = 1989 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cgcagcagcagcaccaaaatc 53 ||||||||||||||||||||| Sbjct: 1181 cgcagcagcagcaccaaaatc 1161
>ref|XM_320565.2| Anopheles gambiae str. PEST ENSANGP00000008692 (ENSANGG00000006547), partial mRNA Length = 1434 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cgcagcagcagcaccaaaatc 53 ||||||||||||||||||||| Sbjct: 968 cgcagcagcagcaccaaaatc 948
>gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, complete sequence Length = 157247 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cacctgcacatacacacatac 130 ||||||||||||||||||||| Sbjct: 59332 cacctgcacatacacacatac 59352
>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone BACR48E21, complete sequence Length = 186002 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 agcagcaccaaaatcagcaaa 59 ||||||||||||||||||||| Sbjct: 52715 agcagcaccaaaatcagcaaa 52695
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agcagcaccaaaatcagcaaa 59 ||||||||||||||||||||| Sbjct: 263379 agcagcaccaaaatcagcaaa 263399
>gb|DQ138936.1| Drosophila yakuba strain T33 CG12105 gene, partial cds Length = 4221 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cagcagcagcaccaaaatcag 55 ||||||||||||||||||||| Sbjct: 835 cagcagcagcaccaaaatcag 855
>gb|DQ138935.1| Drosophila yakuba strain Tai18 CG12105 gene, partial cds Length = 4278 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cagcagcagcaccaaaatcag 55 ||||||||||||||||||||| Sbjct: 847 cagcagcagcaccaaaatcag 867
>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete sequence Length = 200628 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 cacctgcacatacacacatac 130 ||||||||||||||||||||| Sbjct: 104915 cacctgcacatacacacatac 104935
>ref|NM_117875.2| Arabidopsis thaliana unknown protein AT4G17670 mRNA, complete cds Length = 824 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctg 280 |||| ||| |||||||||||||||| ||||| || ||||| Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
>gb|AC171104.1| Drosophila melanogaster clone CH221-06A19, complete sequence Length = 125302 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cagcagcagcaccaaaatcagcaa 58 |||||||||||||| ||||||||| Sbjct: 61320 cagcagcagcaccagaatcagcaa 61297
>ref|XM_463886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 985 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 172 ggccgcgcggaggcagcagc 153
>gb|AC157936.5| Mus musculus chromosome 5, clone RP24-246K15, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aggctctgctctgctcagca 93 |||||||||||||||||||| Sbjct: 115964 aggctctgctctgctcagca 115945
>gb|AC107679.19| Mus musculus chromosome 1, clone RP23-256H11, complete sequence Length = 168732 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 gaaagccacctgcacatacacaca 127 ||||| |||||||||||||||||| Sbjct: 38841 gaaagacacctgcacatacacaca 38818
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 162 ttcgatgccgagctgcttggcgagcccg 189 |||||||| ||||||||||| ||||||| Sbjct: 1171978 ttcgatgcggagctgcttggagagcccg 1171951
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aggctctgctctgctcagca 93 |||||||||||||||||||| Sbjct: 98989 aggctctgctctgctcagca 98970
>emb|X61617.1|DMNEU Drosophila melanogaster neu mRNA Length = 3299 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 334 catccgcagcagcagcacca 353
>ref|XM_382997.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02821.1) partial mRNA Length = 876 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 gcaaagcgagcacaccaccaggct 78 ||||||| |||||||||||||||| Sbjct: 811 gcaaagcaagcacaccaccaggct 788
>ref|XM_798394.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053444777.20) partial mRNA Length = 1023 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 537 gcagcagcagcagcaaaatcagca 560
>gb|BC091661.1| Danio rerio wu:fc83c01, mRNA (cDNA clone IMAGE:7137220), partial cds Length = 1725 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cttccttcgtcctccctcat 31 |||||||||||||||||||| Sbjct: 1037 cttccttcgtcctccctcat 1018
>ref|XM_502831.1| Yarrowia lipolytica CLIB122, YALI0D14652g predicted mRNA Length = 3012 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tggcctgctccttcttcttc 164 |||||||||||||||||||| Sbjct: 1339 tggcctgctccttcttcttc 1320
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gccaagccgctggcgcgcgacagc 245 |||| ||||||||||||||||||| Sbjct: 1275095 gccacgccgctggcgcgcgacagc 1275072
>gb|AC130389.3| Drosophila melanogaster 3 BAC CH221-6A19 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 108834 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cagcagcagcaccaaaatcagcaa 58 |||||||||||||| ||||||||| Sbjct: 44851 cagcagcagcaccagaatcagcaa 44828
>gb|BT009265.1| Triticum aestivum clone wlk8.pk0001.e10:fis, full insert mRNA sequence Length = 1016 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ccgcagcagcagcaccaaaatcag 55 |||||||||||||||||| ||||| Sbjct: 632 ccgcagcagcagcaccaacatcag 655
>gb|AY117186.1| Arabidopsis thaliana unknown protein (At4g17670) mRNA, complete cds Length = 511 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctg 280 |||| ||| |||||||||||||||| ||||| || ||||| Sbjct: 269 acagagacatcttcatgtacagaggagacacaccgttctg 308
>gb|AY064001.1| Arabidopsis thaliana unknown protein (At4g17670) mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctg 280 |||| ||| |||||||||||||||| ||||| || ||||| Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 cgctggcgcgcgacagcgacgtcttcat 256 |||||||||||| |||||||||| |||| Sbjct: 103324 cgctggcgcgcgccagcgacgtcgtcat 103351
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 cgctggcgcgcgacagcgacgtcttcat 256 |||||||||||| |||||||||| |||| Sbjct: 21768 cgctggcgcgcgccagcgacgtcgtcat 21795
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cagcagcagcaccaaaatca 54 |||||||||||||||||||| Sbjct: 184952 cagcagcagcaccaaaatca 184933
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 307 tgcacctcgacgccct-ctgcgccaggc 333 |||||||||||||||| ||||||||||| Sbjct: 6749127 tgcacctcgacgccctgctgcgccaggc 6749154
>emb|CR548643.7| Zebrafish DNA sequence from clone CH211-217H15 in linkage group 13, complete sequence Length = 90157 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cttccttcgtcctccctcat 31 |||||||||||||||||||| Sbjct: 61916 cttccttcgtcctccctcat 61935
>gb|AC010041.7| Drosophila melanogaster 3L BAC RP98-13D12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174712 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 9919 catccgcagcagcagcacca 9900
>gb|AC105293.2| Drosophila melanogaster 3L BAC RP98-45O17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 190353 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cagcagcagcaccaaaatcagcaa 58 |||||||||||||| ||||||||| Sbjct: 31137 cagcagcagcaccagaatcagcaa 31114
>gb|AC010040.6| Drosophila melanogaster 3L BAC RP98-13E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159672 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 133688 catccgcagcagcagcacca 133669
>tpg|BK002002.1| TPA: TPA_inf: Drosophila melanogaster HDC09080 (HDC09080) gene, complete cds Length = 2499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 2409 catccgcagcagcagcacca 2390
>tpg|BK003778.1| TPA: TPA_inf: Drosophila melanogaster HDC06207 (HDC06207) gene, complete cds Length = 1564 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 1488 gcagcagcagcagcaaaatcagca 1511
>ref|NM_001014500.1| Drosophila melanogaster CG33558-PA (CG33558) mRNA, complete cds Length = 6854 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 2164 gcagcagcagcagcaaaatcagca 2187
>ref|NM_169257.1| Drosophila melanogaster neuralized CG11988-RB, transcript variant B (neur), mRNA Length = 3987 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 339 catccgcagcagcagcacca 358
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 acagcgacgtcttcatgtac 260 |||||||||||||||||||| Sbjct: 207224 acagcgacgtcttcatgtac 207205
>ref|NM_057304.3| Drosophila melanogaster neuralized CG11988-RA, transcript variant A (neur), mRNA Length = 3990 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 339 catccgcagcagcagcacca 358
>gb|S62597.1| neu=neuralized [Drosophila melanogaster, mRNA, 3542 nt] Length = 3542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 339 catccgcagcagcagcacca 358
>gb|S62583.1| neu=neuralized [Drosophila, mRNA, 3999 nt] Length = 3999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 338 catccgcagcagcagcacca 357
>gb|AY051987.1| Drosophila melanogaster LD45505 full length cDNA Length = 2656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 323 catccgcagcagcagcacca 342
>gb|AC091634.1|AC091634 Drosophila melanogaster, chromosome 2R, region 50A-50B, BAC clone BACR36J03, complete sequence Length = 159065 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 156105 gcagcagcagcagcaaaatcagca 156082
>gb|AC008288.8|AC008288 Drosophila melanogaster, chromosome 2R, region 42E-42E, BAC clone BACR36G11, complete sequence Length = 174751 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 133155 gcagcagcagcagcaaaatcagca 133178
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ttctgcagcgaggagtgccg 295 |||||||||||||||||||| Sbjct: 22027594 ttctgcagcgaggagtgccg 22027613
>gb|AC009342.5|AC009342 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone BACR29G01, complete sequence Length = 165855 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 17742 gcagcagcagcagcaaaatcagca 17719
>gb|AC009258.3|AC009258 Drosophila melanogaster, chromosome 3R, region 85C-85C, BAC clone BACR09F04, complete sequence Length = 176036 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 95904 catccgcagcagcagcacca 95885
>gb|L12218.1|DROC3HC4ZF Drosophila melanogaster zinc finger protein (neuralized) mRNA, complete cds Length = 3999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 338 catccgcagcagcagcacca 357
>gb|AE004682.1| Pseudomonas aeruginosa PAO1, section 243 of 529 of the complete genome Length = 11158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gatgccgagctgcttggcga 184 |||||||||||||||||||| Sbjct: 1062 gatgccgagctgcttggcga 1081
>gb|AY088445.1| Arabidopsis thaliana clone 6709 mRNA, complete sequence Length = 822 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 241 acagcgacgtcttcatgtacagaggggacacgcccttctg 280 |||| ||| |||||||||||||||| ||||| || ||||| Sbjct: 333 acagagacatcttcatgtacagaggagacacaccgttctg 372
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 133920 ggccgcgcggaggcagcagc 133901
>emb|BX649475.8| Mouse DNA sequence from clone RP23-161F5 on chromosome X, complete sequence Length = 109605 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acctgcacatacacacatac 130 |||||||||||||||||||| Sbjct: 29394 acctgcacatacacacatac 29375
>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0033K18 Length = 138487 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ccaccgtgggcagcggcggt 396 |||||||||||||||||||| Sbjct: 112470 ccaccgtgggcagcggcggt 112451
>gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, complete sequence Length = 183861 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 acctgcacatacacacatac 130 |||||||||||||||||||| Sbjct: 98895 acctgcacatacacacatac 98914
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_H01 Length = 128124 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ttctgcagcgaggagtgccg 295 |||||||||||||||||||| Sbjct: 113343 ttctgcagcgaggagtgccg 113362
>dbj|AK112015.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D03, full insert sequence Length = 1032 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 147 ggccgcgcggaggcagcagc 128
>dbj|AK111582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082P03, full insert sequence Length = 985 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 172 ggccgcgcggaggcagcagc 153
>ref|XM_566179.1| Anopheles gambiae str. PEST ENSANGP00000028877 (ENSANGG00000022270), partial mRNA Length = 1581 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gctggcgcgcgacagcgacg 249 |||||||||||||||||||| Sbjct: 261 gctggcgcgcgacagcgacg 280
>dbj|AK104162.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-G12, full insert sequence Length = 984 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccgcgcggaggcagcagc 354 |||||||||||||||||||| Sbjct: 171 ggccgcgcggaggcagcagc 152
>dbj|AK099407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C06, full insert sequence Length = 1050 Score = 40.1 bits (20), Expect = 5.9 Identities = 43/48 (89%), Gaps = 2/48 (4%) Strand = Plus / Plus Query: 250 tcttcatgtacagagggga-cacgcccttctgcagcgaggagtgccgc 296 ||||||||||||||||||| | || ||||||||||| |||||||||| Sbjct: 516 tcttcatgtacagaggggagcgcg-ccttctgcagcatggagtgccgc 562
>gb|AY107714.1| Zea mays PCO121192 mRNA sequence Length = 742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ttctgcagcgaggagtgccg 295 |||||||||||||||||||| Sbjct: 337 ttctgcagcgaggagtgccg 356
>gb|AC007452.1|AC007452 Drosophila melanogaster, chromosome 2R, region 50A1-50B1, P1 clones DS02357, DS05586, and BACR48I15, complete sequence Length = 146153 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 67430 gcagcagcagcagcaaaatcagca 67407
>gb|AE003681.5| Drosophila melanogaster chromosome 3R, section 19 of 118 of the complete sequence Length = 306650 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 102133 catccgcagcagcagcacca 102114
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 167410 gcagcagcagcagcaaaatcagca 167433
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gcagcagcagcaccaaaatcagca 57 |||||||||||| ||||||||||| Sbjct: 263674 gcagcagcagcagcaaaatcagca 263651
>gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30 of 83 of the complete sequence Length = 283781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 catccgcagcagcagcacca 48 |||||||||||||||||||| Sbjct: 38937 catccgcagcagcagcacca 38918
>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete sequence Length = 303512 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cagcagcagcaccaaaatcagcaa 58 |||||||||||||| ||||||||| Sbjct: 44851 cagcagcagcaccagaatcagcaa 44828
>gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, complete sequence Length = 175110 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ggctctgctctgctcagcat 94 |||||||||||||||||||| Sbjct: 106660 ggctctgctctgctcagcat 106679
>gb|AC135293.3| Mus musculus BAC clone RP23-206K5 from 6, complete sequence Length = 197573 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctgctctgctcagcatcttg 98 |||||||||||||||||||| Sbjct: 126741 ctgctctgctcagcatcttg 126760
>emb|CT485796.1| Medicago truncatula chromosome 5 clone mth2-154i23, COMPLETE SEQUENCE Length = 129047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cagcagcaccaaaatcagca 57 |||||||||||||||||||| Sbjct: 28572 cagcagcaccaaaatcagca 28591
>emb|BX511188.7| Zebrafish DNA sequence from clone DKEY-184A17 in linkage group 13, complete sequence Length = 233525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cttccttcgtcctccctcat 31 |||||||||||||||||||| Sbjct: 205251 cttccttcgtcctccctcat 205270
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 tggcctgctccttcttcttc 164 |||||||||||||||||||| Sbjct: 1790884 tggcctgctccttcttcttc 1790865
>emb|AL596088.14| Mouse DNA sequence from clone RP23-157O10 on chromosome 11, complete sequence Length = 233204 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ctctgctctgctcagcatct 96 |||||||||||||||||||| Sbjct: 38916 ctctgctctgctcagcatct 38935
>emb|AL844181.9| Mouse DNA sequence from clone RP23-128E7 on chromosome X, complete sequence Length = 139178 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acctgcacatacacacatac 130 |||||||||||||||||||| Sbjct: 70016 acctgcacatacacacatac 69997 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,407,838 Number of Sequences: 3902068 Number of extensions: 4407838 Number of successful extensions: 138283 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 137331 Number of HSP's gapped (non-prelim): 948 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
