ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CG020_MOUSE (Q9D1H7) UPF0363 protein C7orf20 homolog 58 1e-08
2CG020_HUMAN (Q7L5D6) UPF0363 protein C7orf20 58 1e-08
3YO164_YEAST (Q12125) UPF0363 protein YOR164C 49 6e-06
4YC4C_SCHPO (O74432) UPF0363 protein C1672.12c 34 0.21
5WRK48_ARATH (Q9FGZ4) Probable WRKY transcription factor 48 (WRKY... 30 5.2
6MERA_SHEPU (Q54465) Mercuric reductase (EC 1.16.1.1) (Hg(II) red... 29 6.8
7CN140_RAT (Q6AYP4) Protein C14orf140 homolog 29 6.8
8SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine pr... 29 8.9

>CG020_MOUSE (Q9D1H7) UPF0363 protein C7orf20 homolog|
          Length = 327

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = +3

Query: 183 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 362
           Q+   +    VE G YYEA QM+++   RY++  +++E  +++ SGA +   HGQ    A
Sbjct: 24  QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHAEARELMYSGALLFFSHGQQNSAA 83

Query: 363 ELAVLFVDTLVKGQFPYNEQTFDRVRKIY 449
           +L++L +++L K +    ++  + + K++
Sbjct: 84  DLSMLVLESLEKAEVDVADELLENLAKVF 112



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>CG020_HUMAN (Q7L5D6) UPF0363 protein C7orf20|
          Length = 327

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = +3

Query: 183 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 362
           Q+   +    VE G YYEA QM+++   RY++  +++E  +++ SGA +   HGQ    A
Sbjct: 24  QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQNSAA 83

Query: 363 ELAVLFVDTLVKGQFPYNEQTFDRVRKIY 449
           +L++L +++L K +    ++  + + K++
Sbjct: 84  DLSMLVLESLEKAEVEVADELLENLAKVF 112



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>YO164_YEAST (Q12125) UPF0363 protein YOR164C|
          Length = 312

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +3

Query: 186 KTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAE 365
           KT++RFE  ++ G YYEA Q  ++ + RY+  + Y   ++++  GA   LK  Q   G +
Sbjct: 15  KTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTD 74

Query: 366 LAVLFVDTLVKGQFPYNEQTFDR-VRKIYEAFP 461
           L    ++     +   ++ +  R VR I E  P
Sbjct: 75  LIFYLLEVYDLAEVKVDDISVARLVRLIAELDP 107



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>YC4C_SCHPO (O74432) UPF0363 protein C1672.12c|
          Length = 303

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +3

Query: 231 YEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAELAVLFVDTLVKGQFP 410
           YE  QM ++   R +  +++ + + +L SGA    +  Q    A+LA+  +D   K  + 
Sbjct: 17  YEGHQMLRTLVNRQVKAKKHDDAVALLYSGAKTLFEIEQTGSAADLAIYMLDVYEKASYA 76

Query: 411 YNEQTFDRVRKIYEAFP 461
            +     R   +   FP
Sbjct: 77  ASLDNKARALTLLGLFP 93



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>WRK48_ARATH (Q9FGZ4) Probable WRKY transcription factor 48 (WRKY DNA-binding|
           protein 48)
          Length = 399

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 443 LSDTIKSLFIIRKLPFDKSVHEQHSEFSTTSYLSMLQLD 327
           L+  + S+F    LPF  S  E HS  +  S+L +L+ D
Sbjct: 63  LAGNLSSIFDTSSLPFPYSYFEDHSSNNPNSFLDLLRQD 101



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>MERA_SHEPU (Q54465) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)|
          Length = 557

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +3

Query: 351 TCGAELAVLFVDTLVKGQFPYNEQTFDRVRKIYEAFPRINMPHFL 485
           TC   L  + V T  KG+   NE+    V  IY A    NMP F+
Sbjct: 363 TCQLNLGAVGVTTNKKGEIVVNERMETNVPGIYAAGDCCNMPQFV 407



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>CN140_RAT (Q6AYP4) Protein C14orf140 homolog|
          Length = 525

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = -1

Query: 516 ISAHHRHNHLQGNGA---YLSWGTPRISF*HDQKFVHYKEIAL*QECPRTAQRVQHHKLP 346
           IS     N+ QG G    YLS  TPR    +DQ F+ +++  +  +     + + H K  
Sbjct: 91  ISQQGSGNNAQGQGKGLFYLSSPTPRYPKANDQDFIPFRKKRVGVDRAYPLKPMVHRKSH 150

Query: 345 VHASTGLWLLTEGCPSLPNT 286
             + TG+     G P LP++
Sbjct: 151 STSETGIDGDQNGYPRLPDS 170



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>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3262

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +3

Query: 174 PPPQKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVT 353
           PPPQ + ++   M+      E + + ++   R+    R ++  D     AT   + GQ T
Sbjct: 754 PPPQVSWKKDGSMLHS----EGRLLIRAEGERHTLLLREAQAADAGSYTATATNELGQAT 809

Query: 354 CGAELAV 374
           C + LAV
Sbjct: 810 CASSLAV 816


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,383,294
Number of Sequences: 219361
Number of extensions: 1601697
Number of successful extensions: 4830
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4828
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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