Clone Name | bart06d05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GDBX_WHEAT (P21292) Gamma-gliadin precursor | 31 | 2.3 |
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>GDBX_WHEAT (P21292) Gamma-gliadin precursor| Length = 302 Score = 30.8 bits (68), Expect = 2.3 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 3 PHFSTHHLPSPVFPSPLKTYRRRP 74 PH + HH P FP P +TY +P Sbjct: 55 PHQTFHHQPQQTFPQPQQTYPHQP 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,749,536 Number of Sequences: 219361 Number of extensions: 222267 Number of successful extensions: 683 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 674 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 683 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)