ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ969064.1| Triticum aestivum mRNA for glycosyltransferase (... 280 4e-72
2emb|AJ969059.1| Hordeum vulgare mRNA for glycosyltransferase (pg... 270 4e-69
3emb|AJ969065.1| Zea mays mRNA for glycosyltransferase (pglcat8 g... 167 4e-38
4emb|AJ969062.1| Saccharum officinarum mRNA for glycosyltransfera... 159 1e-35
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
12emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa... 62 2e-06
13emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
15dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
16dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
17gb|BT018464.1| Zea mays clone EL01N0417C04.d mRNA sequence 44 0.44
18gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, com... 44 0.44
19ref|XM_451299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06710g ... 44 0.44
20ref|XM_744176.1| Aspergillus fumigatus Af293 hypothetical protei... 44 0.44
21ref|XM_548269.2| PREDICTED: Canis familiaris similar to Amilorid... 44 0.44
22emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 44 0.44
23gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Can... 44 0.44
24emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 44 0.44
25ref|XM_550184.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
26ref|XM_524934.1| PREDICTED: Pan troglodytes LOC469551 (LOC469551... 42 1.8
27gb|BC013107.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
28gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, c... 42 1.8
29ref|NM_015726.2| Homo sapiens WD repeat domain 42A (WDR42A), mRNA 42 1.8
30gb|BC111063.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
31emb|AL139011.20| Human DNA sequence from clone RP11-574F21 on ch... 42 1.8
32gb|AY309089.1| Chlamydomonas reinhardtii PF2 (PF2) mRNA, partial... 42 1.8
33gb|AY309087.1|AY309087S1 Chlamydomonas reinhardtii PF2 (PF2) gen... 42 1.8
34emb|CR859013.1| Pongo pygmaeus mRNA; cDNA DKFZp469M021 (from clo... 42 1.8
35emb|CR861411.1| Pongo pygmaeus mRNA; cDNA DKFZp459M072 (from clo... 42 1.8
36emb|CR749801.1| Homo sapiens mRNA; cDNA DKFZp781G1096 (from clon... 42 1.8
37dbj|AB169110.1| Macaca fascicularis testis cDNA, clone: QtsA-172... 42 1.8
38dbj|AK223475.1| Homo sapiens mRNA for H326 variant, clone: FCC11... 42 1.8
39dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
40gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, co... 42 1.8
41gb|BC099846.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
42gb|BC099709.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
43dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
44dbj|AK026481.1| Homo sapiens cDNA: FLJ22828 fis, clone KAIA4051,... 42 1.8
45dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
46gb|BC098271.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
47emb|AL132898.2|CEY59A8B Caenorhabditis elegans YAC Y59A8B, compl... 42 1.8
48gb|AC004583.1|AC004583 Human Chromosome 15q11-q13 PAC clone pDJ7... 42 1.8
49gb|BC080597.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clo... 42 1.8
50gb|U06631.1|HSU06631 Human (H326) mRNA, complete cds 42 1.8
51ref|XM_481246.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
52ref|XM_508256.1| PREDICTED: Pan troglodytes similar to tripartit... 40 6.9
53gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.9
54ref|NM_033278.2| Homo sapiens tripartite motif-containing 3 (TRI... 40 6.9
55ref|NM_006458.2| Homo sapiens tripartite motif-containing 3 (TRI... 40 6.9
56gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.9
57gb|AY616034.1| Xenopus laevis myosin 10 mRNA, complete cds 40 6.9
58gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.9
59gb|AC131596.10| Mus musculus chromosome 10, clone RP23-476G10, c... 40 6.9
60gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
61gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, com... 40 6.9
62emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete ch... 40 6.9
63ref|XM_547081.2| PREDICTED: Canis familiaris similar to heparan ... 40 6.9
64gb|BC029740.1| Homo sapiens mRNA similar to tripartite motif-con... 40 6.9
65emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
66emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 6.9
67emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 6.9
68emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.9
69gb|BC096827.1| Homo sapiens tripartite motif-containing 3, trans... 40 6.9
70dbj|AK126685.1| Homo sapiens cDNA FLJ44731 fis, clone BRACE30257... 40 6.9
71gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, co... 40 6.9
72dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B4... 40 6.9
73gb|AC008523.5| Homo sapiens chromosome 5 clone CTC-464B1, comple... 40 6.9
74gb|AC027311.4| Homo sapiens chromosome 5 clone CTC-229B20, compl... 40 6.9
75gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.9
76gb|AC171007.3| Gallus gallus BAC clone CH261-166I11 from chromos... 40 6.9
77gb|AF220021.1|AF220021 Homo sapiens tripartite motif protein TRI... 40 6.9
78gb|AF220020.1|AF220020 Homo sapiens tripartite motif protein TRI... 40 6.9
79gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.9
80dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
81dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
82gb|AC011365.5| Homo sapiens chromosome 5 clone CTC-558O2, comple... 40 6.9
83dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
84gb|AC009796.6|AC009796 Homo sapiens chromosome 11, clone RP11-21... 40 6.9
85gb|AC097713.3| Homo sapiens BAC clone RP11-251I17 from 2, comple... 40 6.9
86emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chr... 40 6.9
87dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.9
88dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
89dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
90dbj|AP003936.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
91dbj|AK119299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
92dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
93dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B47... 40 6.9
94gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.9
95emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on ch... 40 6.9
96gb|AF045239.1|AF045239 Homo sapiens brain expressed ring finger ... 40 6.9
97emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.9
98gb|AY866242.1| Macaca nemestrina microRNA mir-218-2 gene, comple... 40 6.9
99gb|AY866241.1| Lagothrix lagotricha microRNA mir-218-2 gene, com... 40 6.9
100gb|AY866240.1| Saguinus labiatus microRNA mir-218-2 gene, comple... 40 6.9
101gb|AY866239.1| Macaca mulatta microRNA mir-218-2 gene, complete ... 40 6.9
102gb|AY866238.1| Pan troglodytes microRNA mir-218-2 gene, complete... 40 6.9
103gb|AY866237.1| Pongo pygmaeus microRNA mir-218-2 gene, complete ... 40 6.9
104gb|AY866236.1| Pan paniscus microRNA mir-218-2 gene, complete se... 40 6.9
105emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2... 40 6.9
106emb|AL360192.1|HST000238 Homo sapiens mRNA full length insert cD... 40 6.9 
>emb|AJ969064.1| Triticum aestivum mRNA for glycosyltransferase (pglcat8 gene)
          Length = 1945

 Score =  280 bits (141), Expect = 4e-72
 Identities = 157/161 (97%), Gaps = 1/161 (0%)
 Strand = Plus / Plus

                                                                       
Query: 321 gcctcctcctccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttc 380
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 gcctcctcctccaccttctggttcctgctgcacgcgctctgctgcctcatctcgctcttc 378

                                                                       
Query: 381 ctcggcttccgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctac 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctcggcttccgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctac 438

                                                    
Query: 441 gccgccacctcc-acaacaagtcggcagtgctccgcgccat 480
           || ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 439 gcggccacctccaacaacaagtcggccgtgctccgcgccat 479



 Score =  111 bits (56), Expect = 2e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                       
Query: 166 cgccagatccggccgcggcggcgatgatgaagacgctgctgccgcagagccagctgcggc 225
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 164 cgccagatccggccgcggcggcgatgatgaagcagctgctgccgcagagccagctgcggc 223

                   
Query: 226 gcacggcg 233
           || |||||
Sbjct: 224 gctcggcg 231
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>emb|AJ969059.1| Hordeum vulgare mRNA for glycosyltransferase (pglcat8 gene)
          Length = 1627

 Score =  270 bits (136), Expect = 4e-69
 Identities = 158/164 (96%), Gaps = 1/164 (0%)
 Strand = Plus / Plus

                                                                       
Query: 318 acggcctcctcctccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctc 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 acggcctcctcctccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctc 189

                                                                       
Query: 378 ttcctcggcttccgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctc 437
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 190 ttcctcggcttccgcttctccaggctgctcttcttcctgctcttatacagcagcgcgctc 249

                                                       
Query: 438 tacgccgccacctcc-acaacaagtcggcagtgctccgcgccat 480
           ||||||||||||||| ||||||||| ||| ||||| ||||||||
Sbjct: 250 tacgccgccacctccaacaacaagtgggccgtgcttcgcgccat 293



 Score =  105 bits (53), Expect = 1e-19
 Identities = 60/61 (98%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                       
Query: 200 gctgctgccgcagagccagct-gcggcgcacggcgccgcgctcctccgtcggcggcgtcg 258
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gctgctgccgcagagccagctcgcggcgcacggcgccgcgctcctccgtcggcggcgtcg 70

            
Query: 259 a 259
           |
Sbjct: 71  a 71
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>emb|AJ969065.1| Zea mays mRNA for glycosyltransferase (pglcat8 gene)
          Length = 1522

 Score =  167 bits (84), Expect = 4e-38
 Identities = 108/116 (93%)
 Strand = Plus / Plus

                                                                       
Query: 325 cctcctccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttcctcg 384
           ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 177 cctcctccaccttctggttcctgctccacgcgctctgctgcctcatctcgctcttcctcg 236

                                                                   
Query: 385 gcttccgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctac 440
           |||||||||||||  | || |||||||||||||||||||||| || ||||||||||
Sbjct: 237 gcttccgcttctcgcgtctcctcttcttcctgctcttctccaccaccgcgctctac 292



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                   
Query: 178 ccgcggcggcgatgatgaagacgctgctgccgcagagccagctgcggcgcacggcg 233
           |||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 33  ccgcagcggctatgatgaagtcgctgctgccgcagagccagctgcggcgctcggcg 88
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>emb|AJ969062.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat8 gene)
          Length = 2239

 Score =  159 bits (80), Expect = 1e-35
 Identities = 107/116 (92%)
 Strand = Plus / Plus

                                                                       
Query: 325 cctcctccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttcctcg 384
           ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 272 cctcctccaccttgtggttcctgctccacgcgctctgctgcctcatctcgctcttcctcg 331

                                                                   
Query: 385 gcttccgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctac 440
           |||||||||||||  |||| ||||||||| |||||||||||| || ||||||||||
Sbjct: 332 gcttccgcttctcgcggctcctcttcttcatgctcttctccaccaccgcgctctac 387



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 181 cggcggcgatgatgaagacgctgctgccgcagagccagctgcggcgc 227
           ||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 131 cggcggctatgatgaagtcgctgctgccgcagagccagctgcggcgc 177
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Plus

                                                                            
Query: 330      tccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttcctcggcttc 389
                ||||| ||||||||||| || |||||| ||||||||||| |||||||||||||||| |||
Sbjct: 28311597 tccacgttctggttcctcctccacgcgctctgctgcctcgtctcgctcttcctcgggttc 28311656

                                                                            
Query: 390      cgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctacgccgccacc 449
                |||||||||||||| |||||||||||||||||||||| || |||||||||| || |||||
Sbjct: 28311657 cgcttctccaggctcctcttcttcctgctcttctccaccaccgcgctctactcctccacc 28311716

                  
Query: 450      tc 451
                ||
Sbjct: 28311717 tc 28311718



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                               
Query: 180      gcggcggcgatgatgaagacgctgctgccgcagagccagctgcggcg 226
                ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 28311441 gcggcagcgatgatgaagtcgctgctgccgcagagccagctgcggcg 28311487



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      ccagatccggccgcggcggc 187
                ||||||||||||||||||||
Sbjct: 10235897 ccagatccggccgcggcggc 10235916
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Plus

                                                                         
Query: 330   tccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttcctcggcttc 389
             ||||| ||||||||||| || |||||| ||||||||||| |||||||||||||||| |||
Sbjct: 24175 tccacgttctggttcctcctccacgcgctctgctgcctcgtctcgctcttcctcgggttc 24234

                                                                         
Query: 390   cgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctacgccgccacc 449
             |||||||||||||| |||||||||||||||||||||| || |||||||||| || |||||
Sbjct: 24235 cgcttctccaggctcctcttcttcctgctcttctccaccaccgcgctctactcctccacc 24294

               
Query: 450   tc 451
             ||
Sbjct: 24295 tc 24296



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                            
Query: 180   gcggcggcgatgatgaagacgctgctgccgcagagccagctgcggcg 226
             ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24019 gcggcagcgatgatgaagtcgctgctgccgcagagccagctgcggcg 24065
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score =  155 bits (78), Expect = 2e-34
 Identities = 111/122 (90%)
 Strand = Plus / Plus

                                                                          
Query: 330    tccaccttctggttcctgctgcacgcggtctgctgcctcatctcgctcttcctcggcttc 389
              ||||| ||||||||||| || |||||| ||||||||||| |||||||||||||||| |||
Sbjct: 109626 tccacgttctggttcctcctccacgcgctctgctgcctcgtctcgctcttcctcgggttc 109685

                                                                          
Query: 390    cgcttctccaggctgctcttcttcctgctcttctccagcagcgcgctctacgccgccacc 449
              |||||||||||||| |||||||||||||||||||||| || |||||||||| || |||||
Sbjct: 109686 cgcttctccaggctcctcttcttcctgctcttctccaccaccgcgctctactcctccacc 109745

                
Query: 450    tc 451
              ||
Sbjct: 109746 tc 109747



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 180    gcggcggcgatgatgaagacgctgctgccgcagagccagctgcggcg 226
              ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 109470 gcggcagcgatgatgaagtcgctgctgccgcagagccagctgcggcg 109516
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>dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F15, full
           insert sequence
          Length = 3587

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                       
Query: 370 tctcgctcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctccagca 429
           |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 2   tctcgctcttcctcgggttccgcttctccaggctcctcttcttcctgctcttctccacca 61

                                 
Query: 430 gcgcgctctacgccgccacctc 451
            |||||||||| || |||||||
Sbjct: 62  ccgcgctctactcctccacctc 83
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                   
Query: 376      tcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctcca 426
                ||||||||||||| | ||||||||| || |||||||||||| |||||||||
Sbjct: 28340297 tcttcctcggctttcacttctccagccttctcttcttcctggtcttctcca 28340247



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 166      cgccagatccggccgcggcggc 187
                ||||||||||||||||||||||
Sbjct: 26079971 cgccagatccggccgcggcggc 26079950
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 383      cggcttccgcttctccaggctgctcttcttcctgctcttctcc 425
                |||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 13008227 cggcttccgcttctccagccttctcttcttcctggtcttctcc 13008185



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     cggcctcctcctccaccttc 338
               ||||||||||||||||||||
Sbjct: 4169949 cggcctcctcctccaccttc 4169968
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                           
Query: 383      cggcttccgcttctccaggctgctcttcttcctgctcttctcc 425
                |||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 12962501 cggcttccgcttctccagccttctcttcttcctggtcttctcc 12962459



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     cggcctcctcctccaccttc 338
               ||||||||||||||||||||
Sbjct: 4169936 cggcctcctcctccaccttc 4169955
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>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148110

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 383   cggcttccgcttctccaggctgctcttcttcctgctcttctcc 425
             |||||||||||||||||| || |||||||||||| ||||||||
Sbjct: 59743 cggcttccgcttctccagccttctcttcttcctggtcttctcc 59785
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>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
              complete sequence
          Length = 150957

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 376    tcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctcca 426
              ||||||||||||| | ||||||||| || |||||||||||| |||||||||
Sbjct: 132605 tcttcctcggctttcacttctccagccttctcttcttcctggtcttctcca 132555
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                  
Query: 376     tcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctcca 426
               |||| |||||||||| |||||| || || |||||||||||| |||||||||
Sbjct: 3093705 tcttgctcggcttccacttctctagccttctcttcttcctggtcttctcca 3093655



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 40       tcccctcccccctcaaaacct 60
                |||||||||||||||||||||
Sbjct: 28733281 tcccctcccccctcaaaacct 28733301



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 221     gcggcgcacggcgccgcgctcctcc 245
               ||||||| |||||||||||||||||
Sbjct: 2895004 gcggcgcccggcgccgcgctcctcc 2894980
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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0041E11
          Length = 146335

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 376   tcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctcca 426
             |||| |||||||||| |||||| || || |||||||||||| |||||||||
Sbjct: 37493 tcttgctcggcttccacttctctagccttctcttcttcctggtcttctcca 37443
to top
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 376   tcttcctcggcttccgcttctccaggctgctcttcttcctgctcttctcca 426
             |||| |||||||||| |||||| || || |||||||||||| |||||||||
Sbjct: 61745 tcttgctcggcttccacttctctagccttctcttcttcctggtcttctcca 61695
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>gb|BT018464.1| Zea mays clone EL01N0417C04.d mRNA sequence
          Length = 1053

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 361 gctgcctcatctcgctcttcctcggc 386
           ||||||||||||||||||||| ||||
Sbjct: 270 gctgcctcatctcgctcttccacggc 295
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>gb|AC115855.9| Mus musculus chromosome 3, clone RP24-277E17, complete sequence
          Length = 182349

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 12    tccacccaccacctaccttccc 33
             ||||||||||||||||||||||
Sbjct: 38932 tccacccaccacctaccttccc 38953
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>ref|XM_451299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06710g predicted mRNA
          Length = 1272

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 402 ctgctcttcttcctgctcttct 423
           ||||||||||||||||||||||
Sbjct: 342 ctgctcttcttcctgctcttct 321
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>ref|XM_744176.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g01330)
           partial mRNA
          Length = 789

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 405 ctcttcttcctgctcttctcca 426
           ||||||||||||||||||||||
Sbjct: 383 ctcttcttcctgctcttctcca 404
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>ref|XM_548269.2| PREDICTED: Canis familiaris similar to Amiloride-sensitive cation
           channel 1, neuronal (Amiloride-sensitive brain sodium
           channel) (Brain sodium channel 1) (BNaC1)
           (Amiloride-sensitive cation channel neuronal 1) (BNC1)
           (Degenerin channel MDEG) (LOC491149), mRNA
          Length = 600

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 383 cggcttccgcttctccaggctg 404
           ||||||||||||||||||||||
Sbjct: 285 cggcttccgcttctccaggctg 306
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 402    ctgctcttcttcctgctcttct 423
              ||||||||||||||||||||||
Sbjct: 608444 ctgctcttcttcctgctcttct 608423
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>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 216161

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 14    cacccaccacctaccttccccc 35
             ||||||||||||||||||||||
Sbjct: 76965 cacccaccacctaccttccccc 76986
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>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 166    cgccagatccggccgcggcggc 187
              ||||||||||||||||||||||
Sbjct: 114298 cgccagatccggccgcggcggc 114277
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>ref|XM_550184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 221 gcggcgcacggcgccgcgctcctcc 245
           ||||||| |||||||||||||||||
Sbjct: 36  gcggcgcccggcgccgcgctcctcc 60
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>ref|XM_524934.1| PREDICTED: Pan troglodytes LOC469551 (LOC469551), mRNA
          Length = 822

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 342 aggctgctcttcttcctcctcttct 318
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>gb|BC013107.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone IMAGE:3918647),
           complete cds
          Length = 1444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 570 aggctgctcttcttcctcctcttct 546
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>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence
          Length = 209459

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 403    tgctcttcttcctgctcttct 423
              |||||||||||||||||||||
Sbjct: 126990 tgctcttcttcctgctcttct 126970
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>ref|NM_015726.2| Homo sapiens WD repeat domain 42A (WDR42A), mRNA
          Length = 3849

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 515 aggctgctcttcttcctcctcttct 491
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>gb|BC111063.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone IMAGE:5743945),
           complete cds
          Length = 1685

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 751 aggctgctcttcttcctcctcttct 727
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>emb|AL139011.20| Human DNA sequence from clone RP11-574F21 on chromosome 1 Contains the
             3' end of the PEA15 gene for phosphoprotein enriched in
             astrocytes 15, the gene for H326 protein, part of one
             variant of the PXF gene for peroxisomal farnesylated
             protein, a novel gene and a CpG island, complete sequence
          Length = 52193

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 399   aggctgctcttcttcctgctcttct 423
             ||||||||||||||||| |||||||
Sbjct: 26016 aggctgctcttcttcctcctcttct 26040
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>gb|AY309089.1| Chlamydomonas reinhardtii PF2 (PF2) mRNA, partial cds
          Length = 422

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 418 tcttctccagcagcgcgctct 438
           |||||||||||||||||||||
Sbjct: 140 tcttctccagcagcgcgctct 120
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>gb|AY309087.1|AY309087S1 Chlamydomonas reinhardtii PF2 (PF2) gene, exons 1 through 11
          Length = 7433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  tcttctccagcagcgcgctct 438
            |||||||||||||||||||||
Sbjct: 6952 tcttctccagcagcgcgctct 6932
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>emb|CR859013.1| Pongo pygmaeus mRNA; cDNA DKFZp469M021 (from clone DKFZp469M021)
          Length = 6416

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 410 aggctgctcttcttcctcctcttct 386
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>emb|CR861411.1| Pongo pygmaeus mRNA; cDNA DKFZp459M072 (from clone DKFZp459M072)
          Length = 3818

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 479 aggctgctcttcttcctcctcttct 455
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>emb|CR749801.1| Homo sapiens mRNA; cDNA DKFZp781G1096 (from clone DKFZp781G1096)
          Length = 3176

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 777 aggctgctcttcttcctcctcttct 753
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>dbj|AB169110.1| Macaca fascicularis testis cDNA, clone: QtsA-17288, similar to
           human H326 (H326), mRNA, RefSeq: NM_015726.2
          Length = 2870

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 407 aggctgctcttcttcctcctcttct 383
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>dbj|AK223475.1| Homo sapiens mRNA for H326 variant, clone: FCC118D04
          Length = 2353

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 409 aggctgctcttcttcctcctcttct 385
to top
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431H09
          Length = 166886

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     tcccctcccccctcaaaacct 60
              |||||||||||||||||||||
Sbjct: 116355 tcccctcccccctcaaaacct 116375
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>gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, complete sequence
          Length = 161099

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 401    gctgctcttcttcctgctcttctcc 425
              |||||||||||||| ||||||||||
Sbjct: 124441 gctgctcttcttccagctcttctcc 124417
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>gb|BC099846.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone MGC:118893
           IMAGE:40001581), complete cds
          Length = 2611

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 460 aggctgctcttcttcctcctcttct 436
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>gb|BC099709.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone MGC:118891
           IMAGE:40001574), complete cds
          Length = 2611

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 460 aggctgctcttcttcctcctcttct 436
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>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0030H07
          Length = 168253

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 221    gcggcgcacggcgccgcgctcctcc 245
              ||||||| |||||||||||||||||
Sbjct: 102002 gcggcgcccggcgccgcgctcctcc 101978
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>dbj|AK026481.1| Homo sapiens cDNA: FLJ22828 fis, clone KAIA4051, highly similar to
           HSU06631 Human (H326) mRNA
          Length = 3083

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 620 aggctgctcttcttcctcctcttct 596
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>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06,
          full insert sequence
          Length = 3221

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 40 tcccctcccccctcaaaacct 60
          |||||||||||||||||||||
Sbjct: 39 tcccctcccccctcaaaacct 59
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>gb|BC098271.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone MGC:118892
           IMAGE:40001575), complete cds
          Length = 2611

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 460 aggctgctcttcttcctcctcttct 436
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>emb|AL132898.2|CEY59A8B Caenorhabditis elegans YAC Y59A8B, complete sequence
          Length = 174662

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 376    tcttcctcggcttccgcttctccag 400
              |||||||||||||| ||||||||||
Sbjct: 164706 tcttcctcggcttcagcttctccag 164682
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>gb|AC004583.1|AC004583 Human Chromosome 15q11-q13 PAC clone pDJ778a2, complete sequence
          Length = 132493

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 401   gctgctcttcttcctgctcttctcc 425
             |||||||||||||| ||||||||||
Sbjct: 51426 gctgctcttcttccagctcttctcc 51450
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>gb|BC080597.1| Homo sapiens WD repeat domain 42A, mRNA (cDNA clone IMAGE:4870402),
           complete cds
          Length = 1273

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 400 aggctgctcttcttcctcctcttct 376
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>gb|U06631.1|HSU06631 Human (H326) mRNA, complete cds
          Length = 3828

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 399 aggctgctcttcttcctgctcttct 423
           ||||||||||||||||| |||||||
Sbjct: 518 aggctgctcttcttcctcctcttct 494
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>ref|XM_481246.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 188 gatgatgaagacgctgctgccgcagagccagc 219
           ||||||||||| ||||  ||||||||||||||
Sbjct: 159 gatgatgaagaggctgaggccgcagagccagc 128
to top
>ref|XM_508256.1| PREDICTED: Pan troglodytes similar to tripartite motif protein
           TRIM3 isoform beta (LOC450993), mRNA
          Length = 2127

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 760 atcgccgcagaccgtccacc 741
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     gctgcggcgcacggcgccgc 237
               ||||||||||||||||||||
Sbjct: 2189113 gctgcggcgcacggcgccgc 2189094
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>ref|NM_033278.2| Homo sapiens tripartite motif-containing 3 (TRIM3), transcript
            variant 2, mRNA
          Length = 2894

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcgccgcagaccgtccacc 80
            ||||||||||||||||||||
Sbjct: 1144 atcgccgcagaccgtccacc 1125
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>ref|NM_006458.2| Homo sapiens tripartite motif-containing 3 (TRIM3), transcript
            variant 1, mRNA
          Length = 3059

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcgccgcagaccgtccacc 80
            ||||||||||||||||||||
Sbjct: 1309 atcgccgcagaccgtccacc 1290
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     gcggcgcacggcgccgcgct 240
               ||||||||||||||||||||
Sbjct: 2591011 gcggcgcacggcgccgcgct 2590992
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>gb|AY616034.1| Xenopus laevis myosin 10 mRNA, complete cds
          Length = 7764

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 323  ctcctcctccaccttctggttcct 346
            |||||||||||||||||| |||||
Sbjct: 6076 ctcctcctccaccttctgcttcct 6053
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     gcggcgcacggcgccgcgct 240
               ||||||||||||||||||||
Sbjct: 3803216 gcggcgcacggcgccgcgct 3803197
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>gb|AC131596.10| Mus musculus chromosome 10, clone RP23-476G10, complete sequence
          Length = 178668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    ctgctcttcttcctgctctt 421
              ||||||||||||||||||||
Sbjct: 105975 ctgctcttcttcctgctctt 105994
to top
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07,
              complete sequence
          Length = 142134

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    ccagatccggccgcggcggc 187
              ||||||||||||||||||||
Sbjct: 120201 ccagatccggccgcggcggc 120220
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>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence
          Length = 147821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    gttcccctcccccctcaaaa 57
             ||||||||||||||||||||
Sbjct: 29923 gttcccctcccccctcaaaa 29904
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>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12
          Length = 329100

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   tccggccgcggcggcgatga 192
             ||||||||||||||||||||
Sbjct: 42920 tccggccgcggcggcgatga 42939
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>ref|XM_547081.2| PREDICTED: Canis familiaris similar to heparan sulfate
           D-glucosaminyl 3-O-sulfotransferase 4 (LOC489961), mRNA
          Length = 294

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 421 tctccagcagcgcgctctacgccg 444
           |||||||||||||||||| |||||
Sbjct: 31  tctccagcagcgcgctctgcgccg 8
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>gb|BC029740.1| Homo sapiens mRNA similar to tripartite motif-containing 3 (cDNA
            clone IMAGE:3864415)
          Length = 3502

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcgccgcagaccgtccacc 80
            ||||||||||||||||||||
Sbjct: 1033 atcgccgcagaccgtccacc 1014
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    ccggccgcggcggcgatgatgaag 197
              ||||||||||| ||||||||||||
Sbjct: 243188 ccggccgcggccgcgatgatgaag 243211
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    ccggccgcggcggcgatgatgaag 197
              ||||||||||| ||||||||||||
Sbjct: 155585 ccggccgcggccgcgatgatgaag 155608
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    ccggccgcggcggcgatgatgaag 197
              ||||||||||| ||||||||||||
Sbjct: 324152 ccggccgcggccgcgatgatgaag 324175
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     gcggcgcacggcgccgcgct 240
               ||||||||||||||||||||
Sbjct: 3543582 gcggcgcacggcgccgcgct 3543563
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>gb|BC096827.1| Homo sapiens tripartite motif-containing 3, transcript variant 2,
            mRNA (cDNA clone MGC:111679 IMAGE:6108991), complete cds
          Length = 2911

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   atcgccgcagaccgtccacc 80
            ||||||||||||||||||||
Sbjct: 1153 atcgccgcagaccgtccacc 1134
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>dbj|AK126685.1| Homo sapiens cDNA FLJ44731 fis, clone BRACE3025719, highly  similar
           to Homo sapiens ring finger protein 22 (RNF22)
          Length = 3377

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 546 atcgccgcagaccgtccacc 527
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>gb|AC084337.7| Homo sapiens chromosome 11, clone CTD-2010I16, complete sequence
          Length = 112295

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atcgccgcagaccgtccacc 80
             ||||||||||||||||||||
Sbjct: 45618 atcgccgcagaccgtccacc 45637
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>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence
          Length = 171634

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cctccaccttctggttcctg 347
              ||||||||||||||||||||
Sbjct: 136865 cctccaccttctggttcctg 136884
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>gb|AC008523.5| Homo sapiens chromosome 5 clone CTC-464B1, complete sequence
          Length = 120236

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   tgatgaagacgctgctgccg 209
             ||||||||||||||||||||
Sbjct: 25943 tgatgaagacgctgctgccg 25924
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>gb|AC027311.4| Homo sapiens chromosome 5 clone CTC-229B20, complete sequence
          Length = 119063

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 383    cggcttccgcttctccaggctgct 406
              ||||||||||||||||| ||||||
Sbjct: 116643 cggcttccgcttctccacgctgct 116666
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 382     tcggcttccgcttctccagg 401
               ||||||||||||||||||||
Sbjct: 1835748 tcggcttccgcttctccagg 1835767
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>gb|AC171007.3| Gallus gallus BAC clone CH261-166I11 from chromosome ul, complete
             sequence
          Length = 223327

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   cggcgccgcgctcctccgtc 248
             ||||||||||||||||||||
Sbjct: 94128 cggcgccgcgctcctccgtc 94109
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>gb|AF220021.1|AF220021 Homo sapiens tripartite motif protein TRIM3 isoform beta (TRIM3)
           mRNA, complete cds; alternatively spliced
          Length = 2227

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 889 atcgccgcagaccgtccacc 870
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>gb|AF220020.1|AF220020 Homo sapiens tripartite motif protein TRIM3 isoform alpha (TRIM3)
           mRNA, complete cds; alternatively spliced
          Length = 2260

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 922 atcgccgcagaccgtccacc 903
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    gagccagctgcggcgcacgg 231
              ||||||||||||||||||||
Sbjct: 300213 gagccagctgcggcgcacgg 300232
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 188      gatgatgaagacgctgctgccgcagagccagc 219
                ||||||||||| ||||  ||||||||||||||
Sbjct: 10927628 gatgatgaagaggctgaggccgcagagccagc 10927597
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      ccagatccggccgcggcggc 187
                ||||||||||||||||||||
Sbjct: 26750164 ccagatccggccgcggcggc 26750183
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>gb|AC011365.5| Homo sapiens chromosome 5 clone CTC-558O2, complete sequence
          Length = 152723

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   cggcttccgcttctccaggctgct 406
             ||||||||||||||||| ||||||
Sbjct: 25668 cggcttccgcttctccacgctgct 25691
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 168      ccagatccggccgcggcggc 187
                ||||||||||||||||||||
Sbjct: 14260868 ccagatccggccgcggcggc 14260887
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>gb|AC009796.6|AC009796 Homo sapiens chromosome 11, clone RP11-211E17, complete sequence
          Length = 192239

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 658 atcgccgcagaccgtccacc 677
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>gb|AC097713.3| Homo sapiens BAC clone RP11-251I17 from 2, complete sequence
          Length = 173790

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    gctgctcttcttcctgctct 420
              ||||||||||||||||||||
Sbjct: 140940 gctgctcttcttcctgctct 140959
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>emb|AL929021.13| Mouse DNA sequence from clone RP23-89H14 on chromosome 2, complete
             sequence
          Length = 181549

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   cctccaccttctggttcctg 347
             ||||||||||||||||||||
Sbjct: 22501 cctccaccttctggttcctg 22482
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 408     ttcttcctgctcttctccag 427
               ||||||||||||||||||||
Sbjct: 1864355 ttcttcctgctcttctccag 1864336
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>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0649C11
          Length = 138870

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ccagatccggccgcggcggc 187
             ||||||||||||||||||||
Sbjct: 40124 ccagatccggccgcggcggc 40143
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>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ccagatccggccgcggcggc 187
             ||||||||||||||||||||
Sbjct: 97021 ccagatccggccgcggcggc 97040
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>dbj|AP003936.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_E05
          Length = 137352

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 188   gatgatgaagacgctgctgccgcagagccagc 219
             ||||||||||| ||||  ||||||||||||||
Sbjct: 21355 gatgatgaagaggctgaggccgcagagccagc 21324
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>dbj|AK119299.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E10, full
            insert sequence
          Length = 3053

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 188  gatgatgaagacgctgctgccgcagagccagc 219
            ||||||||||| ||||  ||||||||||||||
Sbjct: 1347 gatgatgaagaggctgaggccgcagagccagc 1316
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>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0026A08
          Length = 171272

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 188    gatgatgaagacgctgctgccgcagagccagc 219
              ||||||||||| ||||  ||||||||||||||
Sbjct: 141413 gatgatgaagaggctgaggccgcagagccagc 141382
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>dbj|AP005858.1| Mus musculus genomic DNA, chromosome 2 clone:B478C13, complete sequence
          Length = 174714

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cctccaccttctggttcctg 347
              ||||||||||||||||||||
Sbjct: 136683 cctccaccttctggttcctg 136702
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     gcggcgcacggcgccgcgct 240
               ||||||||||||||||||||
Sbjct: 1323441 gcggcgcacggcgccgcgct 1323460
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>emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on chromosome 2, complete
             sequence
          Length = 192345

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    acccaccacctaccttcccc 34
             ||||||||||||||||||||
Sbjct: 41962 acccaccacctaccttcccc 41981
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>gb|AF045239.1|AF045239 Homo sapiens brain expressed ring finger protein mRNA, complete cds
          Length = 2260

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 922 atcgccgcagaccgtccacc 903
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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 123469

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    cggcctcctcctccaccttc 338
              ||||||||||||||||||||
Sbjct: 112345 cggcctcctcctccaccttc 112364
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>gb|AY866242.1| Macaca nemestrina microRNA mir-218-2 gene, complete sequence
          Length = 632

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 315 cggcttccgcttctccacgctgct 338
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>gb|AY866241.1| Lagothrix lagotricha microRNA mir-218-2 gene, complete sequence
          Length = 729

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 382 cggcttccgcttctccacgctgct 405
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>gb|AY866240.1| Saguinus labiatus microRNA mir-218-2 gene, complete sequence
          Length = 701

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 368 cggcttccgcttctccacgctgct 391
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>gb|AY866239.1| Macaca mulatta microRNA mir-218-2 gene, complete sequence
          Length = 707

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 359 cggcttccgcttctccacgctgct 382
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>gb|AY866238.1| Pan troglodytes microRNA mir-218-2 gene, complete sequence
          Length = 641

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 307 cggcttccgcttctccacgctgct 330
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>gb|AY866237.1| Pongo pygmaeus microRNA mir-218-2 gene, complete sequence
          Length = 656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 340 cggcttccgcttctccacgctgct 363
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>gb|AY866236.1| Pan paniscus microRNA mir-218-2 gene, complete sequence
          Length = 636

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 383 cggcttccgcttctccaggctgct 406
           ||||||||||||||||| ||||||
Sbjct: 310 cggcttccgcttctccacgctgct 333
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>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 103601

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctccaccttctggttcctgc 348
             ||||||||||||||||||||
Sbjct: 37842 ctccaccttctggttcctgc 37861
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>emb|AL360192.1|HST000238 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 787957
          Length = 1396

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  atcgccgcagaccgtccacc 80
           ||||||||||||||||||||
Sbjct: 859 atcgccgcagaccgtccacc 840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,113,818
Number of Sequences: 3902068
Number of extensions: 4113818
Number of successful extensions: 131615
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129494
Number of HSP's gapped (non-prelim): 2119
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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