ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_188276.1| Oryza sativa (japonica cultivar-group), predic... 176 5e-41
2dbj|AK068172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 5e-41
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
4dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6ref|XM_476736.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
7gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, co... 42 1.8
8emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 42 1.8
9emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
10emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 42 1.8
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
13gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.8
14dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15dbj|AK065622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
16ref|XM_474418.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
17ref|XM_467134.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
18ref|NM_193825.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
19ref|NM_191562.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
20ref|XM_477343.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
21gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 7.0
22gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
23gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.0
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.0
25gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genom... 40 7.0
26gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.0
27emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247... 40 7.0
28emb|X82447.4|OCA82447 Oligotropha carboxidovorans plasmid pHCG3 40 7.0
29emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
30gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 gen... 40 7.0
31dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
32gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromo... 40 7.0
33gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 1... 40 7.0
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
37dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
42dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
43gb|AC159025.3| Pan troglodytes BAC clone CH251-489N6 from chromo... 40 7.0
44dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
45dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
46dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
47dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
48dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
49dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
50dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
51dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
52dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
53emb|AJ427974.1|OSA427974 Oryza sativa HAK3 gene for putative pot... 40 7.0
54dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
55dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
56dbj|AK102638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
57dbj|AK100340.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
58dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
59dbj|AK071942.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
60dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
61gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Canc... 40 7.0
62emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.0
63emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide... 40 7.0
64gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.0
65gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
68emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
69emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136... 40 7.0
70emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.0
71emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 7.0
72emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-3... 40 7.0
73gb|M61705.1|MUSIAP Mouse intestinal alkaline phosphatase (IAP) g... 40 7.0

>ref|NM_188276.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1923

 Score =  176 bits (89), Expect = 5e-41
 Identities = 224/269 (83%)
 Strand = Plus / Plus

                                                                       
Query: 248 gaggggcagagcgacccgcctgtgcatggcgtggccgatagggtcgtcggggtgctgggg 307
           |||||||| ||||||| |||||||||||||||  || | | ||||||||| |||||||||
Sbjct: 175 gaggggcatagcgaccagcctgtgcatggcgtcaccaacacggtcgtcggcgtgctgggg 234

                                                                       
Query: 308 ggcggccagttggggaagatgctctgccaggcggcgagtcagatggggatcaaagtggcc 367
           || |||||| ||||||||||||| ||||||||||| || ||||||||| |||   |||||
Sbjct: 235 ggaggccagctggggaagatgctgtgccaggcggccagccagatgggggtcaggatggcc 294

                                                                       
Query: 368 atcctggaccccctcaaggactgccccgcgaactccgtctgtcacgagcatgtcgtgggg 427
           || || || |||||| |||||||||| |||| ||| || || |||||||||||||| |||
Sbjct: 295 atacttgatcccctcgaggactgcccggcgagctcggtttgccacgagcatgtcgtcggg 354

                                                                       
Query: 428 agcttcagtgatggtgacgcggtccgtgagtttgcgaagaggtgtgatgttctaactgtg 487
           ||||||| |||||| | | ||||  | ||||| || |||||||| |  ||| | || |||
Sbjct: 355 agcttcaatgatggcgccacggttagcgagttcgcaaagaggtgcggggttttgacggtg 414

                                        
Query: 488 gaaattgagcatgtggatgctgtgacact 516
           |||||||||||||| || ||||| |||||
Sbjct: 415 gaaattgagcatgtcgacgctgtaacact 443



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>dbj|AK068172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129D15, full
           insert sequence
          Length = 2276

 Score =  176 bits (89), Expect = 5e-41
 Identities = 224/269 (83%)
 Strand = Plus / Plus

                                                                       
Query: 248 gaggggcagagcgacccgcctgtgcatggcgtggccgatagggtcgtcggggtgctgggg 307
           |||||||| ||||||| |||||||||||||||  || | | ||||||||| |||||||||
Sbjct: 305 gaggggcatagcgaccagcctgtgcatggcgtcaccaacacggtcgtcggcgtgctgggg 364

                                                                       
Query: 308 ggcggccagttggggaagatgctctgccaggcggcgagtcagatggggatcaaagtggcc 367
           || |||||| ||||||||||||| ||||||||||| || ||||||||| |||   |||||
Sbjct: 365 ggaggccagctggggaagatgctgtgccaggcggccagccagatgggggtcaggatggcc 424

                                                                       
Query: 368 atcctggaccccctcaaggactgccccgcgaactccgtctgtcacgagcatgtcgtgggg 427
           || || || |||||| |||||||||| |||| ||| || || |||||||||||||| |||
Sbjct: 425 atacttgatcccctcgaggactgcccggcgagctcggtttgccacgagcatgtcgtcggg 484

                                                                       
Query: 428 agcttcagtgatggtgacgcggtccgtgagtttgcgaagaggtgtgatgttctaactgtg 487
           ||||||| |||||| | | ||||  | ||||| || |||||||| |  ||| | || |||
Sbjct: 485 agcttcaatgatggcgccacggttagcgagttcgcaaagaggtgcggggttttgacggtg 544

                                        
Query: 488 gaaattgagcatgtggatgctgtgacact 516
           |||||||||||||| || ||||| |||||
Sbjct: 545 gaaattgagcatgtcgacgctgtaacact 573



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/190 (85%)
 Strand = Plus / Plus

                                                                           
Query: 252     ggcagagcgacccgcctgtgcatggcgtggccgatagggtcgtcggggtgctggggggcg 311
               |||| ||||||| |||||||||||||||  || | | ||||||||| ||||||||||| |
Sbjct: 5405477 ggcatagcgaccagcctgtgcatggcgtcaccaacacggtcgtcggcgtgctggggggag 5405536

                                                                           
Query: 312     gccagttggggaagatgctctgccaggcggcgagtcagatggggatcaaagtggccatcc 371
               ||||| ||||||||||||| ||||||||||| || ||||||||| |||   ||||||| |
Sbjct: 5405537 gccagctggggaagatgctgtgccaggcggccagccagatgggggtcaggatggccatac 5405596

                                                                           
Query: 372     tggaccccctcaaggactgccccgcgaactccgtctgtcacgagcatgtcgtggggagct 431
               | || |||||| |||||||||| |||| ||| || || |||||||||||||| |||||||
Sbjct: 5405597 ttgatcccctcgaggactgcccggcgagctcggtttgccacgagcatgtcgtcgggagct 5405656

                         
Query: 432     tcagtgatgg 441
               ||| ||||||
Sbjct: 5405657 tcaatgatgg 5405666



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 159      ggaagccgcggccgccaagccgga 182
                |||||||||||||||||| |||||
Sbjct: 30660198 ggaagccgcggccgccaacccgga 30660221



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 163      gccgcggccgccaagccgga 182
                ||||||||||||||||||||
Sbjct: 15134841 gccgcggccgccaagccgga 15134822



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 485     gtggaaattgagcatgtggatgctgtgacact 516
               ||||||||||||||||| || ||||| |||||
Sbjct: 5405824 gtggaaattgagcatgtcgacgctgtaacact 5405855



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>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1046G12
          Length = 163533

 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/190 (85%)
 Strand = Plus / Plus

                                                                          
Query: 252    ggcagagcgacccgcctgtgcatggcgtggccgatagggtcgtcggggtgctggggggcg 311
              |||| ||||||| |||||||||||||||  || | | ||||||||| ||||||||||| |
Sbjct: 156821 ggcatagcgaccagcctgtgcatggcgtcaccaacacggtcgtcggcgtgctggggggag 156880

                                                                          
Query: 312    gccagttggggaagatgctctgccaggcggcgagtcagatggggatcaaagtggccatcc 371
              ||||| ||||||||||||| ||||||||||| || ||||||||| |||   ||||||| |
Sbjct: 156881 gccagctggggaagatgctgtgccaggcggccagccagatgggggtcaggatggccatac 156940

                                                                          
Query: 372    tggaccccctcaaggactgccccgcgaactccgtctgtcacgagcatgtcgtggggagct 431
              | || |||||| |||||||||| |||| ||| || || |||||||||||||| |||||||
Sbjct: 156941 ttgatcccctcgaggactgcccggcgagctcggtttgccacgagcatgtcgtcgggagct 157000

                        
Query: 432    tcagtgatgg 441
              ||| ||||||
Sbjct: 157001 tcaatgatgg 157010



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 485    gtggaaattgagcatgtggatgctgtgacact 516
              ||||||||||||||||| || ||||| |||||
Sbjct: 157168 gtggaaattgagcatgtcgacgctgtaacact 157199



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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1015E06
          Length = 164583

 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/190 (85%)
 Strand = Plus / Plus

                                                                        
Query: 252  ggcagagcgacccgcctgtgcatggcgtggccgatagggtcgtcggggtgctggggggcg 311
            |||| ||||||| |||||||||||||||  || | | ||||||||| ||||||||||| |
Sbjct: 2317 ggcatagcgaccagcctgtgcatggcgtcaccaacacggtcgtcggcgtgctggggggag 2376

                                                                        
Query: 312  gccagttggggaagatgctctgccaggcggcgagtcagatggggatcaaagtggccatcc 371
            ||||| ||||||||||||| ||||||||||| || ||||||||| |||   ||||||| |
Sbjct: 2377 gccagctggggaagatgctgtgccaggcggccagccagatgggggtcaggatggccatac 2436

                                                                        
Query: 372  tggaccccctcaaggactgccccgcgaactccgtctgtcacgagcatgtcgtggggagct 431
            | || |||||| |||||||||| |||| ||| || || |||||||||||||| |||||||
Sbjct: 2437 ttgatcccctcgaggactgcccggcgagctcggtttgccacgagcatgtcgtcgggagct 2496

                      
Query: 432  tcagtgatgg 441
            ||| ||||||
Sbjct: 2497 tcaatgatgg 2506



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 485  gtggaaattgagcatgtggatgctgtgacact 516
            ||||||||||||||||| || ||||| |||||
Sbjct: 2664 gtggaaattgagcatgtcgacgctgtaacact 2695



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>ref|XM_476736.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3102

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 cctccgcctcgccgccgcctc 203
           |||||||||||||||||||||
Sbjct: 39  cctccgcctcgccgccgcctc 59



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>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   ggatcaaagtggccatcctgg 374
             |||||||||||||||||||||
Sbjct: 83144 ggatcaaagtggccatcctgg 83124



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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   gccggacctccgcctcgccgc 197
             |||||||||||||||||||||
Sbjct: 46281 gccggacctccgcctcgccgc 46261



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>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21,
              complete sequence
          Length = 143093

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    cctccgcctcgccgccgcctc 203
              |||||||||||||||||||||
Sbjct: 107796 cctccgcctcgccgccgcctc 107816



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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 175    aagccggacctccgcctcgccgccg 199
              |||||||||||||||||||| ||||
Sbjct: 403407 aagccggacctccgcctcgcggccg 403383



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 183      cctccgcctcgccgccgcctc 203
                |||||||||||||||||||||
Sbjct: 18891886 cctccgcctcgccgccgcctc 18891906



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 186      ccgcctcgccgccgcctctctcgc 209
                |||||||||||||||||| |||||
Sbjct: 35032468 ccgcctcgccgccgcctccctcgc 35032491



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 184      ctccgcctcgccgccgcctc 203
                ||||||||||||||||||||
Sbjct: 25412325 ctccgcctcgccgccgcctc 25412306



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 183     cctccgcctcgccgccgcctc 203
               |||||||||||||||||||||
Sbjct: 3688868 cctccgcctcgccgccgcctc 3688848



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 9576276 cctccgcctcgccgccgcct 9576295



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 177     gccggacctccgcctcgccgc 197
               |||||||||||||||||||||
Sbjct: 2064405 gccggacctccgcctcgccgc 2064385



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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0050F10
          Length = 151986

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   cctccgcctcgccgccgcctc 203
             |||||||||||||||||||||
Sbjct: 33219 cctccgcctcgccgccgcctc 33199



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>dbj|AK065622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031K22, full
           insert sequence
          Length = 3102

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 cctccgcctcgccgccgcctc 203
           |||||||||||||||||||||
Sbjct: 39  cctccgcctcgccgccgcctc 59



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>ref|XM_474418.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 ccgcctcgccgccgcctctctcgc 209
           |||||||||||||||||| |||||
Sbjct: 141 ccgcctcgccgccgcctccctcgc 164



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>ref|XM_467134.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 cctccgcctcgccgccgcct 202
           ||||||||||||||||||||
Sbjct: 320 cctccgcctcgccgccgcct 339



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>ref|NM_193825.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2421

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  gccgcggccgccaagccgga 182
            ||||||||||||||||||||
Sbjct: 2074 gccgcggccgccaagccgga 2093



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>ref|NM_191562.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1416

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 159 ggaagccgcggccgccaagccgga 182
           |||||||||||||||||| |||||
Sbjct: 174 ggaagccgcggccgccaacccgga 197



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>ref|XM_477343.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 cctccgcctcgccgccgcct 202
           ||||||||||||||||||||
Sbjct: 359 cctccgcctcgccgccgcct 378



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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    ccgcctcgccgccgcctctctcgc 209
              |||||||||| |||||||||||||
Sbjct: 344679 ccgcctcgcctccgcctctctcgc 344656



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>gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0062D09, complete sequence
          Length = 160244

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 82150 cctccgcctcgccgccgcct 82169



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     aggactgccccgcgaactcc 403
               ||||||||||||||||||||
Sbjct: 5661904 aggactgccccgcgaactcc 5661885



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 15521247 cctccgcctcgccgccgcct 15521228



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 5396811 cctccgcctcgccgccgcct 5396792



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>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete
             sequence
          Length = 115079

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 20798 cctccgcctcgccgccgcct 20779



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>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 102979 cctccgcctcgccgccgcct 102960



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>emb|AL096701.14|HSA247I13 Human DNA sequence from clone RP11-247I13 on chromosome 22 Contains the
             5' end of the DRG1 gene for developmentally regulated GTP
             binding protein 1, the EIF4ENIF1 gene foreukaryotic
             translation initiation factor 4E nuclear import factor 1,
             the 5' end of the gene for homolog of yeast Sfi1 (SFI1), a
             H2A histone family member Z (H2AFZ) pseudogene, a
             ribosomal protein S26 (RPS260) pseudogene, two novel genes
             and two CpG islands, complete sequence
          Length = 168110

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ctagccaccgcctccgggag 72
             ||||||||||||||||||||
Sbjct: 89195 ctagccaccgcctccgggag 89176



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>emb|X82447.4|OCA82447 Oligotropha carboxidovorans plasmid pHCG3
          Length = 133058

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   gccgcggccgccaagccgga 182
             ||||||||||||||||||||
Sbjct: 79685 gccgcggccgccaagccgga 79704



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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
              complete sequence
          Length = 164577

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    ctccgcctcgccgccgcctc 203
              ||||||||||||||||||||
Sbjct: 138883 ctccgcctcgccgccgcctc 138864



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>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete
             sequence
          Length = 137366

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 75285 cctccgcctcgccgccgcct 75266



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>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0560B06
          Length = 161720

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gccgcggccgccaagccgga 182
              ||||||||||||||||||||
Sbjct: 150893 gccgcggccgccaagccgga 150874



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>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown,
            complete sequence
          Length = 180132

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ctagccaccgcctccgggag 72
            ||||||||||||||||||||
Sbjct: 8277 ctagccaccgcctccgggag 8258



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>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete
             Sequence, complete sequence
          Length = 105198

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   gccgcggccgccaagccgga 182
             ||||||||||||||||||||
Sbjct: 88503 gccgcggccgccaagccgga 88484



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 4004285 cctccgcctcgccgccgcct 4004266



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 675993 cctccgcctcgccgccgcct 675974



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 8517421 cctccgcctcgccgccgcct 8517402



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 19702227 cctccgcctcgccgccgcct 19702246



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 16261294 cctccgcctcgccgccgcct 16261313



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 20354632 cctccgcctcgccgccgcct 20354651



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     acctccgcctcgccgccgcc 201
               ||||||||||||||||||||
Sbjct: 8025187 acctccgcctcgccgccgcc 8025206



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 1008792 cctccgcctcgccgccgcct 1008811



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 15515781 cctccgcctcgccgccgcct 15515762



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 5396026 cctccgcctcgccgccgcct 5396007



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 26601748 cctccgcctcgccgccgcct 26601767



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>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09,
              complete sequence
          Length = 153950

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 126589 cctccgcctcgccgccgcct 126570



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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 159    ggaagccgcggccgccaagccgga 182
              |||||||||||||||||| |||||
Sbjct: 102475 ggaagccgcggccgccaacccgga 102498



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>gb|AC159025.3| Pan troglodytes BAC clone CH251-489N6 from chromosome unknown, complete
              sequence
          Length = 181817

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     ctagccaccgcctccgggag 72
              ||||||||||||||||||||
Sbjct: 165309 ctagccaccgcctccgggag 165290



to top

>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J13
          Length = 152837

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 71665 cctccgcctcgccgccgcct 71684



to top

>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gccgcggccgccaagccgga 182
              ||||||||||||||||||||
Sbjct: 106807 gccgcggccgccaagccgga 106788



to top

>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016D02
          Length = 157822

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 78027 cctccgcctcgccgccgcct 78046



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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0046H10
          Length = 155544

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    acctccgcctcgccgccgcc 201
              ||||||||||||||||||||
Sbjct: 132705 acctccgcctcgccgccgcc 132724



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>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   acctccgcctcgccgccgcc 201
             ||||||||||||||||||||
Sbjct: 48956 acctccgcctcgccgccgcc 48975



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>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519E06
          Length = 170634

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 144129 cctccgcctcgccgccgcct 144148



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>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_F09
          Length = 139371

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 35909 cctccgcctcgccgccgcct 35928



to top

>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1344_B01
          Length = 170912

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 77810 cctccgcctcgccgccgcct 77829



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>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1059D01
          Length = 158792

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 84006 cctccgcctcgccgccgcct 84025



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>emb|AJ427974.1|OSA427974 Oryza sativa HAK3 gene for putative potasium transporter, exons 1-6
          Length = 3777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  gccgcggccgccaagccgga 182
            ||||||||||||||||||||
Sbjct: 2934 gccgcggccgccaagccgga 2953



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>dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D12, full
           insert sequence
          Length = 1658

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 159 ggaagccgcggccgccaagccgga 182
           |||||||||||||||||| |||||
Sbjct: 299 ggaagccgcggccgccaacccgga 322



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>dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F08, full
           insert sequence
          Length = 1063

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 acctccgcctcgccgccgcc 201
           ||||||||||||||||||||
Sbjct: 306 acctccgcctcgccgccgcc 287



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>dbj|AK102638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099P04, full
           insert sequence
          Length = 1884

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 cctccgcctcgccgccgcct 202
           ||||||||||||||||||||
Sbjct: 118 cctccgcctcgccgccgcct 137



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>dbj|AK100340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N10, full
            insert sequence
          Length = 2159

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  gccgcggccgccaagccgga 182
            ||||||||||||||||||||
Sbjct: 1599 gccgcggccgccaagccgga 1618



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>dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057G06, full
           insert sequence
          Length = 1064

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 acctccgcctcgccgccgcc 201
           ||||||||||||||||||||
Sbjct: 307 acctccgcctcgccgccgcc 288



to top

>dbj|AK071942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G08, full
           insert sequence
          Length = 1514

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 cctccgcctcgccgccgcct 202
           ||||||||||||||||||||
Sbjct: 109 cctccgcctcgccgccgcct 128



to top

>dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E03, full
            insert sequence
          Length = 2067

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  acctccgcctcgccgccgcc 201
            ||||||||||||||||||||
Sbjct: 1356 acctccgcctcgccgccgcc 1337



to top

>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 232977

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   taactgtggaaattgagcat 499
             ||||||||||||||||||||
Sbjct: 62014 taactgtggaaattgagcat 61995



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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   ccgcctcgccgccgcctctctcgc 209
             |||||||||||||||||| |||||
Sbjct: 64178 ccgcctcgccgccgcctccctcgc 64201



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>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin
          Length = 107379

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctctgccaggcggcgagtca 348
             ||||||||||||||||||||
Sbjct: 69582 ctctgccaggcggcgagtca 69601



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     gatgctctgccaggcggcga 344
               ||||||||||||||||||||
Sbjct: 3321482 gatgctctgccaggcggcga 3321501



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 183      cctccgcctcgccgccgcct 202
                ||||||||||||||||||||
Sbjct: 19713503 cctccgcctcgccgccgcct 19713522



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 8588184 cctccgcctcgccgccgcct 8588165



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctccgcctcgccgccgcct 202
               ||||||||||||||||||||
Sbjct: 4004272 cctccgcctcgccgccgcct 4004253



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 675993 cctccgcctcgccgccgcct 675974



to top

>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   ccgcctcgccgccgcctctctcgc 209
             |||||||||||||||||| |||||
Sbjct: 91518 ccgcctcgccgccgcctccctcgc 91541



to top

>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 118211

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 103141 cctccgcctcgccgccgcct 103160



to top

>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132682

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   cctccgcctcgccgccgcct 202
             ||||||||||||||||||||
Sbjct: 40706 cctccgcctcgccgccgcct 40687



to top

>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cctccgcctcgccgccgcct 202
              ||||||||||||||||||||
Sbjct: 273799 cctccgcctcgccgccgcct 273780



to top

>emb|AL122126.4|CNS01DT1 Human chromosome 14 DNA sequence BAC R-30H9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 150076

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    caccctcctctaaaccccta 44
             ||||||||||||||||||||
Sbjct: 46007 caccctcctctaaaccccta 46026



to top

>gb|M61705.1|MUSIAP Mouse intestinal alkaline phosphatase (IAP) gene, complete cds
          Length = 5293

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 gatcaaagtggccatcctgg 374
           ||||||||||||||||||||
Sbjct: 379 gatcaaagtggccatcctgg 360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,058,998
Number of Sequences: 3902068
Number of extensions: 3058998
Number of successful extensions: 59051
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57356
Number of HSP's gapped (non-prelim): 1693
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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