ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06c10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 406 bits (205), Expect = e-110 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 83 agatggccggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcg 142 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30019640 agatggccgggatcgtggtggtgttcgacttcgacaagacgatcatcgacgtcgacagcg 30019581 Query: 143 acnactgggtcgtcgacggcctgggcgccaccgagctcttcgaccgcctgctgcccacca 202 || |||||||||| ||||| || ||||| || ||| ||||| || ||||||||||||| Sbjct: 30019580 acaactgggtcgtggacgggctcggcgcgacggaggagttcgagcggctgctgcccacca 30019521 Query: 203 tgccgtggaacaccctcatcgacaccgttatgggggagctgcacgcgcagggcaagaccc 262 ||||||||||||||||||| |||||| | ||||| ||||| |||||| |||||| | | Sbjct: 30019520 tgccgtggaacaccctcatggacaccatgatgggcgagctccacgcgagcggcaagtcgc 30019461 Query: 263 tccgcgacgtcgccgacgtgctccgggccgcgcccatcgacccgcacgtcgtcgccgcca 322 || ||||||||| | ||||||| || | ||||| ||||||||| |||||||||||||| Sbjct: 30019460 tcgccgacgtcgcgggcgtgctcaggtcggcgccgctcgacccgcgcgtcgtcgccgcca 30019401 Query: 323 tcagggccgcctacagcctcggctgcgacctcagggtcctcagcgacgccnaccgcttct 382 ||| |||| |||| |||| |||||||||||| || |||||||||||||| ||||||||| Sbjct: 30019400 tcaaggcctgctacggcctgggctgcgacctccggatcctcagcgacgccaaccgcttct 30019341 Query: 383 tcatcgaggccgtcctcgaccaccacggcctccggggctacttctccgagatcaacacca 442 ||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 30019340 tcatcgacaccatcctcgaccaccacggcctcacgggttacttctccgagatcaacacca 30019281 Query: 443 accccagccgcgtcgacgccg---acggccgcctccgcatcgcgccgcaccacgactttc 499 |||| ||| ||||||||||| |||||||||||||||||||||| |||||||||| | Sbjct: 30019280 acccgagcgccgtcgacgccgccaccggccgcctccgcatcgcgccgtaccacgacttcc 30019221 Query: 500 acgccggcccgca 512 ||||||||||||| Sbjct: 30019220 acgccggcccgca 30019208 Score = 67.9 bits (34), Expect = 3e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 97 gtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgggtc 153 |||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 23581618 gtggtggtgttcgacttcgacaggaccatcatcgagtgggacagcgacgactgggtc 23581562 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/83 (81%) Strand = Plus / Minus Query: 364 agcgacgccnaccgcttcttcatcgaggccgtcctcgaccaccacggcctccggggctac 423 ||||||||| || ||||||||||||| |||| || || ||||||||| ||| || | | Sbjct: 23581155 agcgacgccaacgccttcttcatcgagaccgtgctggagcaccacggcgtcctcggatgc 23581096 Query: 424 ttctccgagatcaacaccaaccc 446 ||||| ||||||| ||| ||||| Sbjct: 23581095 ttctcggagatcagcacgaaccc 23581073 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tggccggcgtcgtggtggtgttcg 109 ||||||||| |||||||||||||| Sbjct: 17486879 tggccggcggcgtggtggtgttcg 17486856
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 406 bits (205), Expect = e-110 Identities = 376/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Minus Query: 83 agatggccggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcg 142 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 15630 agatggccgggatcgtggtggtgttcgacttcgacaagacgatcatcgacgtcgacagcg 15571 Query: 143 acnactgggtcgtcgacggcctgggcgccaccgagctcttcgaccgcctgctgcccacca 202 || |||||||||| ||||| || ||||| || ||| ||||| || ||||||||||||| Sbjct: 15570 acaactgggtcgtggacgggctcggcgcgacggaggagttcgagcggctgctgcccacca 15511 Query: 203 tgccgtggaacaccctcatcgacaccgttatgggggagctgcacgcgcagggcaagaccc 262 ||||||||||||||||||| |||||| | ||||| ||||| |||||| |||||| | | Sbjct: 15510 tgccgtggaacaccctcatggacaccatgatgggcgagctccacgcgagcggcaagtcgc 15451 Query: 263 tccgcgacgtcgccgacgtgctccgggccgcgcccatcgacccgcacgtcgtcgccgcca 322 || ||||||||| | ||||||| || | ||||| ||||||||| |||||||||||||| Sbjct: 15450 tcgccgacgtcgcgggcgtgctcaggtcggcgccgctcgacccgcgcgtcgtcgccgcca 15391 Query: 323 tcagggccgcctacagcctcggctgcgacctcagggtcctcagcgacgccnaccgcttct 382 ||| |||| |||| |||| |||||||||||| || |||||||||||||| ||||||||| Sbjct: 15390 tcaaggcctgctacggcctgggctgcgacctccggatcctcagcgacgccaaccgcttct 15331 Query: 383 tcatcgaggccgtcctcgaccaccacggcctccggggctacttctccgagatcaacacca 442 ||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 15330 tcatcgacaccatcctcgaccaccacggcctcacgggttacttctccgagatcaacacca 15271 Query: 443 accccagccgcgtcgacgccg---acggccgcctccgcatcgcgccgcaccacgactttc 499 |||| ||| ||||||||||| |||||||||||||||||||||| |||||||||| | Sbjct: 15270 acccgagcgccgtcgacgccgccaccggccgcctccgcatcgcgccgtaccacgacttcc 15211 Query: 500 acgccggcccgca 512 ||||||||||||| Sbjct: 15210 acgccggcccgca 15198
>ref|NM_191798.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 402 bits (203), Expect = e-109 Identities = 374/431 (86%), Gaps = 3/431 (0%) Strand = Plus / Plus Query: 85 atggccggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgac 144 |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 atggccgggatcgtggtggtgttcgacttcgacaagacgatcatcgacgtcgacagcgac 60 Query: 145 nactgggtcgtcgacggcctgggcgccaccgagctcttcgaccgcctgctgcccaccatg 204 |||||||||| ||||| || ||||| || ||| ||||| || ||||||||||||||| Sbjct: 61 aactgggtcgtggacgggctcggcgcgacggaggagttcgagcggctgctgcccaccatg 120 Query: 205 ccgtggaacaccctcatcgacaccgttatgggggagctgcacgcgcagggcaagaccctc 264 ||||||||||||||||| |||||| | ||||| ||||| |||||| |||||| | ||| Sbjct: 121 ccgtggaacaccctcatggacaccatgatgggcgagctccacgcgagcggcaagtcgctc 180 Query: 265 cgcgacgtcgccgacgtgctccgggccgcgcccatcgacccgcacgtcgtcgccgccatc 324 ||||||||| | ||||||| || | ||||| ||||||||| |||||||||||||||| Sbjct: 181 gccgacgtcgcgggcgtgctcaggtcggcgccgctcgacccgcgcgtcgtcgccgccatc 240 Query: 325 agggccgcctacagcctcggctgcgacctcagggtcctcagcgacgccnaccgcttcttc 384 | |||| |||| |||| |||||||||||| || |||||||||||||| ||||||||||| Sbjct: 241 aaggcctgctacggcctgggctgcgacctccggatcctcagcgacgccaaccgcttcttc 300 Query: 385 atcgaggccgtcctcgaccaccacggcctccggggctacttctccgagatcaacaccaac 444 ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 301 atcgacaccatcctcgaccaccacggcctcacgggttacttctccgagatcaacaccaac 360 Query: 445 cccagccgcgtcgacgccg---acggccgcctccgcatcgcgccgcaccacgactttcac 501 || ||| ||||||||||| |||||||||||||||||||||| |||||||||| ||| Sbjct: 361 ccgagcgccgtcgacgccgccaccggccgcctccgcatcgcgccgtaccacgacttccac 420 Query: 502 gccggcccgca 512 ||||||||||| Sbjct: 421 gccggcccgca 431
>dbj|AK061237.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-C03, full insert sequence Length = 1100 Score = 398 bits (201), Expect = e-108 Identities = 375/433 (86%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 83 agatggccggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcg 142 |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 83 agatggccgggatcgtggtggtgttcgacttcgacaagacgatcatcgacgtcgacagcg 142 Query: 143 acnactgggtcgtcgacggcctgggcgccaccgagctcttcgaccgcctgctgcccacca 202 || |||||||||| ||||| || ||| | || ||| ||||| || ||||||||||||| Sbjct: 143 acaactgggtcgtggacgggctcggcacgacggaggagttcgagcggctgctgcccacca 202 Query: 203 tgccgtggaacaccctcatcgacaccgttatgggggagctgcacgcgcagggcaagaccc 262 ||||||||||||||||||| |||||| | ||||| ||||| |||||| |||||| | | Sbjct: 203 tgccgtggaacaccctcatggacaccatgatgggcgagctccacgcgagcggcaagtcgc 262 Query: 263 tccgcgacgtcgccgacgtgctccgggccgcgcccatcgacccgcacgtcgtcgccgcca 322 || ||||||||| | ||||||| || | ||||| ||||||||| |||||||||||||| Sbjct: 263 tcgccgacgtcgcgggcgtgctcaggtcggcgccgctcgacccgcgcgtcgtcgccgcca 322 Query: 323 tcagggccgcctacagcctcggctgcgacctcagggtcctcagcgacgccnaccgcttct 382 ||| |||| |||| |||| |||||||||||| || |||||||||||||| ||||||||| Sbjct: 323 tcaaggcctgctacggcctgggctgcgacctccggatcctcagcgacgccaaccgcttct 382 Query: 383 tcatcgaggccgtcctcgaccaccacggcctccggggctacttctccgagatcaacacca 442 ||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 383 tcatcgacaccatcctcgaccaccacggcctcacgggttacttctccgagatcaacacca 442 Query: 443 accccagccgcgtcgacgccg---acggccgcctccgcatcgcgccgcaccacgactttc 499 |||| ||| ||||||||||| |||||||||||||||||||||| |||||||||| | Sbjct: 443 acccgagcgccgtcgacgccgccaccggccgcctccgcatcgcgccgtaccacgacttcc 502 Query: 500 acgccggcccgca 512 ||||||||||||| Sbjct: 503 acgccggcccgca 515
>gb|AY107750.1| Zea mays PCO107612 mRNA sequence Length = 1158 Score = 325 bits (164), Expect = 8e-86 Identities = 353/417 (84%), Gaps = 6/417 (1%) Strand = Plus / Plus Query: 85 atggccggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgac 144 |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 69 atggccggggtcgttgtggtgttcgacttcgacaagacgatcatcgacgtcgacagcgac 128 Query: 145 nactgggtcgtcgacggcctgggcgccaccgagctcttcgaccgcctgctgcccaccatg 204 |||||||||| ||| |||| ||| |||||||| ||||| ||||| |||||||||||| Sbjct: 129 aactgggtcgtggacagcctcggcttcaccgagccgttcgagcgcctcctgcccaccatg 188 Query: 205 ccgtggaacaccctcatcgacaccgttatgggggagctgcacgcgcagggcaagaccctc 264 || |||||||| ||||| |||||| | |||||||||||||||||||| |||| |||||| Sbjct: 189 ccctggaacacgctcatggacaccatgatgggggagctgcacgcgcacggcaggaccctg 248 Query: 265 cgcgacgtcgccgacgtgctccgggccgcgcccatcgacccgcacgtcgtcgccgccatc 324 |||||||||||| | |||||| || |||||| ||| | || |||| |||||||||| Sbjct: 249 gacgacgtcgccgaggcgctccgtgcggcgcccgtcgtcgcgggcgtccccgccgccatc 308 Query: 325 agggccgcctacagcctcggctgcgacctcagggtcctcagcgacgccnaccgcttcttc 384 | |||||||||| |||||||||||||| | ||||||||||||||| || ||||||| Sbjct: 309 aaggccgcctacgcgctcggctgcgacctgcgcgtcctcagcgacgccaacgccttcttc 368 Query: 385 atcgaggccgtcctcgaccaccacggcctccggggctacttctccgagatcaacaccaac 444 ||||| ||||||| | ||||||||||| | ||||| ||||||| |||||||||||||| Sbjct: 369 atcgacaccgtcctggcgcaccacggcctgctgggctgcttctcccagatcaacaccaac 428 Query: 445 cccagcc------gcgtcgacgccgacggccgcctccgcatcgcgccgcaccacgac 495 ||||||| || |||||||||||||||||||||||||| ||| |||||||| Sbjct: 429 cccagccaccccgacgccgacgccgacggccgcctccgcatcgggccctaccacgac 485
>ref|XM_464747.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 115 bits (58), Expect = 1e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 91 ggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgg 150 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 25 ggcgtggtggtggtgttcgacttcgacaagaccatcatcgactgcgacagcgacaactgg 84 Query: 151 gtcgtcgacggcctgggcgccaccg 175 |||||||||| || |||||||||| Sbjct: 85 gtcgtcgacgcgctcggcgccaccg 109 Score = 101 bits (51), Expect = 2e-18 Identities = 118/138 (85%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 340 ctcggctgcgacctcagggtcctcagcgacgccnaccgcttcttcatcgaggccgtcctc 399 ||||| ||||| |||||||| |||||||||||| || ||||||| ||| ||||||||| Sbjct: 274 ctcgggtgcgagctcagggtgctcagcgacgccaacgccttcttcgtcggcgccgtcctc 333 Query: 400 gaccaccacggcctccggggctacttctccgagatcaacaccaaccccagccg-cgtcga 458 ||||||||||||||| |||| |||||| | | || ||||||| ||| |||| |||||| Sbjct: 334 gaccaccacggcctcgccggctgcttctcggcggtcgacaccaa-cccggccgccgtcga 392 Query: 459 cgccgacggccgcctccg 476 |||||||||||||||||| Sbjct: 393 cgccgacggccgcctccg 410
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 115 bits (58), Expect = 1e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 91 ggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgg 150 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 7077879 ggcgtggtggtggtgttcgacttcgacaagaccatcatcgactgcgacagcgacaactgg 7077938 Query: 151 gtcgtcgacggcctgggcgccaccg 175 |||||||||| || |||||||||| Sbjct: 7077939 gtcgtcgacgcgctcggcgccaccg 7077963 Score = 101 bits (51), Expect = 2e-18 Identities = 118/138 (85%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 340 ctcggctgcgacctcagggtcctcagcgacgccnaccgcttcttcatcgaggccgtcctc 399 ||||| ||||| |||||||| |||||||||||| || ||||||| ||| ||||||||| Sbjct: 7078217 ctcgggtgcgagctcagggtgctcagcgacgccaacgccttcttcgtcggcgccgtcctc 7078276 Query: 400 gaccaccacggcctccggggctacttctccgagatcaacaccaaccccagccg-cgtcga 458 ||||||||||||||| |||| |||||| | | || ||||||| ||| |||| |||||| Sbjct: 7078277 gaccaccacggcctcgccggctgcttctcggcggtcgacaccaa-cccggccgccgtcga 7078335 Query: 459 cgccgacggccgcctccg 476 |||||||||||||||||| Sbjct: 7078336 cgccgacggccgcctccg 7078353
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 115 bits (58), Expect = 1e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 91 ggcgtcgtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgg 150 ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 81298 ggcgtggtggtggtgttcgacttcgacaagaccatcatcgactgcgacagcgacaactgg 81357 Query: 151 gtcgtcgacggcctgggcgccaccg 175 |||||||||| || |||||||||| Sbjct: 81358 gtcgtcgacgcgctcggcgccaccg 81382 Score = 101 bits (51), Expect = 2e-18 Identities = 118/138 (85%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 340 ctcggctgcgacctcagggtcctcagcgacgccnaccgcttcttcatcgaggccgtcctc 399 ||||| ||||| |||||||| |||||||||||| || ||||||| ||| ||||||||| Sbjct: 81636 ctcgggtgcgagctcagggtgctcagcgacgccaacgccttcttcgtcggcgccgtcctc 81695 Query: 400 gaccaccacggcctccggggctacttctccgagatcaacaccaaccccagccg-cgtcga 458 ||||||||||||||| |||| |||||| | | || ||||||| ||| |||| |||||| Sbjct: 81696 gaccaccacggcctcgccggctgcttctcggcggtcgacaccaa-cccggccgccgtcga 81754 Query: 459 cgccgacggccgcctccg 476 |||||||||||||||||| Sbjct: 81755 cgccgacggccgcctccg 81772
>ref|XM_463399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 67.9 bits (34), Expect = 3e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 97 gtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgggtc 153 |||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 58 gtggtggtgttcgacttcgacaggaccatcatcgagtgggacagcgacgactgggtc 114 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/83 (81%) Strand = Plus / Plus Query: 364 agcgacgccnaccgcttcttcatcgaggccgtcctcgaccaccacggcctccggggctac 423 ||||||||| || ||||||||||||| |||| || || ||||||||| ||| || | | Sbjct: 325 agcgacgccaacgccttcttcatcgagaccgtgctggagcaccacggcgtcctcggatgc 384 Query: 424 ttctccgagatcaacaccaaccc 446 ||||| ||||||| ||| ||||| Sbjct: 385 ttctcggagatcagcacgaaccc 407
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 67.9 bits (34), Expect = 3e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 97 gtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgggtc 153 |||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 44317 gtggtggtgttcgacttcgacaggaccatcatcgagtgggacagcgacgactgggtc 44261 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/83 (81%) Strand = Plus / Minus Query: 364 agcgacgccnaccgcttcttcatcgaggccgtcctcgaccaccacggcctccggggctac 423 ||||||||| || ||||||||||||| |||| || || ||||||||| ||| || | | Sbjct: 43854 agcgacgccaacgccttcttcatcgagaccgtgctggagcaccacggcgtcctcggatgc 43795 Query: 424 ttctccgagatcaacaccaaccc 446 ||||| ||||||| ||| ||||| Sbjct: 43794 ttctcggagatcagcacgaaccc 43772
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 67.9 bits (34), Expect = 3e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 97 gtggtggtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgggtc 153 |||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct: 144923 gtggtggtgttcgacttcgacaggaccatcatcgagtgggacagcgacgactgggtc 144867 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/83 (81%) Strand = Plus / Minus Query: 364 agcgacgccnaccgcttcttcatcgaggccgtcctcgaccaccacggcctccggggctac 423 ||||||||| || ||||||||||||| |||| || || ||||||||| ||| || | | Sbjct: 144460 agcgacgccaacgccttcttcatcgagaccgtgctggagcaccacggcgtcctcggatgc 144401 Query: 424 ttctccgagatcaacaccaaccc 446 ||||| ||||||| ||| ||||| Sbjct: 144400 ttctcggagatcagcacgaaccc 144378
>ref|NM_105959.2| Arabidopsis thaliana phosphoric monoester hydrolase AT1G73010 mRNA, complete cds Length = 1172 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 128 ttcgacttcgacaagaccatcatcgacgttgatagcga 165
>gb|BT015567.1| Arabidopsis thaliana At1g73010 mRNA sequence Length = 885 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 49 ttcgacttcgacaagaccatcatcgacgttgatagcga 86
>emb|BX817736.1|CNS0ACNR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZG03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1117 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 114 ttcgacttcgacaagaccatcatcgacgttgatagcga 151
>gb|AY085944.1| Arabidopsis thaliana clone 19976 mRNA, complete sequence Length = 990 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 123 ttcgacttcgacaagaccatcatcgacgttgatagcga 160
>dbj|AK176548.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-06-N10 Length = 1092 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 122 ttcgacttcgacaagaccatcatcgacgttgatagcga 159
>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete sequence Length = 116944 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 106 ttcgacttcgacaagaccatcatcgacgtcgacagcga 143 ||||||||||||||||||||||||||||| || ||||| Sbjct: 68701 ttcgacttcgacaagaccatcatcgacgttgatagcga 68664
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 gcgtcgtggtggtgttcgactt 113 |||||||||||||||||||||| Sbjct: 1348983 gcgtcgtggtggtgttcgactt 1349004
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 cctcgaccaccacggcctccgg 417 |||||||||||||||||||||| Sbjct: 18144 cctcgaccaccacggcctccgg 18165
>ref|NM_176386.1| Drosophila melanogaster CG11489-RC, transcript variant C (CG11489), mRNA Length = 4183 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 cctcgaccaccacggcctccgg 417 |||||||||||||||||||||| Sbjct: 692 cctcgaccaccacggcctccgg 713
>gb|AY095005.1| Drosophila melanogaster GH08190 full insert cDNA Length = 6773 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 cctcgaccaccacggcctccgg 417 |||||||||||||||||||||| Sbjct: 692 cctcgaccaccacggcctccgg 713
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 261 cctccgcgacgtcgccgacgtg 282 |||||||||||||||||||||| Sbjct: 1700235 cctccgcgacgtcgccgacgtg 1700256
>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete sequence Length = 365612 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 cctcgaccaccacggcctccgg 417 |||||||||||||||||||||| Sbjct: 151036 cctcgaccaccacggcctccgg 151057
>gb|AF057167.1|AF057167 Drosophila melanogaster DEAD-box protein (Ddx1) gene, partial cds; and cysteine string protein (CSP) gene, alternative splice products, complete cds Length = 10519 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 396 cctcgaccaccacggcctccgg 417 |||||||||||||||||||||| Sbjct: 9823 cctcgaccaccacggcctccgg 9844
>gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene Length = 40241 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 cgcgtcgacgccgacggccgc 471 ||||||||||||||||||||| Sbjct: 14364 cgcgtcgacgccgacggccgc 14384
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 cagccgcgtcgacgccgacgg 467 ||||||||||||||||||||| Sbjct: 1127853 cagccgcgtcgacgccgacgg 1127873
>gb|AY502076.1| Rhodococcus sp. DK17 plasmid pDK3, partial sequence Length = 104578 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcgacgtcgccgacgtgct 284 ||||||||||||||||||||| Sbjct: 85527 ccgcgacgtcgccgacgtgct 85547
>emb|CR733680.2|CNS0GSVZ Tetraodon nigroviridis full-length cDNA Length = 1087 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 tgggggagctgcacgcgcagggcaa 257 |||||||||||||||| |||||||| Sbjct: 572 tgggggagctgcacgctcagggcaa 596
>emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 phosphinothricin tripeptide biosynthetic gene cluster: ORFB1, ORFB2, ORF1, phsB gene, ORFM, phsC gene, pmi gene, adhP gene, ORF3, pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene, cpps gene, cppm gene, aldP gene, pmet gene, pms gene, phsA gene, pat gene, dea gene, the1 gene, the2 gene, trs gene, prpA gene, ORFE1, ORFE2 and ORFE3 (partial) Length = 37823 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 cgcgtcgacgccgacggccgc 471 ||||||||||||||||||||| Sbjct: 15966 cgcgtcgacgccgacggccgc 15986
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cgtcgagatggccggcgtcgt 98 ||||||||||||||||||||| Sbjct: 2228537 cgtcgagatggccggcgtcgt 2228517
>gb|AE005677.1| Caulobacter crescentus CB15 section 3 of 359 of the complete genome Length = 14299 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 tggccggcgtcgtggtggtgttcga 110 ||||||||||||||| ||||||||| Sbjct: 1543 tggccggcgtcgtggaggtgttcga 1519
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cgtcgagatggccggcgtcgt 98 ||||||||||||||||||||| Sbjct: 3967375 cgtcgagatggccggcgtcgt 3967395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ctcgaccaccacggcctccgg 417 ||||||||||||||||||||| Sbjct: 25091002 ctcgaccaccacggcctccgg 25091022
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcgacgtcgccgacgtgct 284 ||||||||||||||||||||| Sbjct: 2102653 ccgcgacgtcgccgacgtgct 2102673
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ctcgaccaccacggcctccgg 417 ||||||||||||||||||||| Sbjct: 40477 ctcgaccaccacggcctccgg 40457
>dbj|AK100450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090P15, full insert sequence Length = 1268 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ctcgaccaccacggcctccgg 417 ||||||||||||||||||||| Sbjct: 286 ctcgaccaccacggcctccgg 306
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 gccgcgtcgacgccgacggcc 469 ||||||||||||||||||||| Sbjct: 3599603 gccgcgtcgacgccgacggcc 3599583
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ctcgaccaccacggcctccgg 417 ||||||||||||||||||||| Sbjct: 25019204 ctcgaccaccacggcctccgg 25019224
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ctcgaccaccacggcctccgg 417 ||||||||||||||||||||| Sbjct: 16169 ctcgaccaccacggcctccgg 16149
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 atgggggagctgcacgcgcagggca 256 ||||| ||||||||||||||||||| Sbjct: 44909 atgggcgagctgcacgcgcagggca 44933
>gb|AC172859.1| Brassica rapa subsp. pekinensis clone KBrB023K01, complete sequence Length = 102061 Score = 42.1 bits (21), Expect = 1.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 103 gtgttcgacttcgacaagaccatcatcgacgtcgacagcgacnactgggtcgtcga 158 |||||||| ||||||||||| || || ||||| || ||||| | ||||||||||| Sbjct: 76798 gtgttcgatttcgacaagacgattattgacgtggatagcgataattgggtcgtcga 76743
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgtggtggtgttcgacttcg 115 |||||||||||||||||||| Sbjct: 63872 cgtggtggtgttcgacttcg 63891
>gb|AY316744.1|AY316743S2 Lysobacter enzymogenes indole-3-glycerol phosphate synthase (trpC) gene, partial cds; and possible phosphoserine phosphatase (serB) gene, complete cds Length = 1216 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tggtggtgttcgacttcgac 117 |||||||||||||||||||| Sbjct: 475 tggtggtgttcgacttcgac 494
>ref|XM_475567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3084 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 1480 tcagggccgcctccagcctcggct 1457
>ref|NM_196910.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0071K18.17), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 agccgcgtcgacgccgacggccgc 471 |||||||||||||| ||||||||| Sbjct: 1081 agccgcgtcgacgcggacggccgc 1104
>ref|XM_474613.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2316 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 1085 tcagggccgcctccagcctcggct 1062
>gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018J01, complete sequence Length = 82510 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cgtcgccgccatcagggccg 331 |||||||||||||||||||| Sbjct: 29405 cgtcgccgccatcagggccg 29386
>gb|AC009744.8| Drosophila melanogaster clone BACR06G16, complete sequence Length = 179038 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 173952 ttcgaccccctgctgcccaccatg 173929
>gb|DQ177687.1| Uncultured bacterium clone 4731 putative membrane-bound nitrate reductase (narG) gene, partial cds Length = 650 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 cggccgcctccgcatcgcgc 484 |||||||||||||||||||| Sbjct: 298 cggccgcctccgcatcgcgc 279
>ref|XM_536664.2| PREDICTED: Canis familiaris sterol regulatory element binding transcription factor 1, transcript variant 1 (SREBF1), mRNA Length = 3957 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cggccgcctccgcatcgcgccgca 488 ||||||||||| |||||||||||| Sbjct: 2686 cggccgcctcctcatcgcgccgca 2663
>ref|XM_859549.1| PREDICTED: Canis familiaris sterol regulatory element binding transcription factor 1, transcript variant 2 (SREBF1), mRNA Length = 4056 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cggccgcctccgcatcgcgccgca 488 ||||||||||| |||||||||||| Sbjct: 2785 cggccgcctcctcatcgcgccgca 2762
>ref|XM_500810.1| Yarrowia lipolytica CLIB122, YALI0B12694g predicted mRNA Length = 6552 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gtcaagtccaagaagaagga 76 |||||||||||||||||||| Sbjct: 3445 gtcaagtccaagaagaagga 3464
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 accgcctgctgcccaccatg 204 |||||||||||||||||||| Sbjct: 1627962 accgcctgctgcccaccatg 1627981
>ref|XM_965617.1| PREDICTED: Tribolium castaneum similar to CG12913-PA (LOC659298), mRNA Length = 4707 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 aggccgtcctcgaccaccac 408 |||||||||||||||||||| Sbjct: 4621 aggccgtcctcgaccaccac 4640
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 agccgcgtcgacgccgacggccgc 471 |||||||||||||| ||||||||| Sbjct: 20723 agccgcgtcgacgcggacggccgc 20746
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tcatcgaggccgtcctcgac 402 |||||||||||||||||||| Sbjct: 194448 tcatcgaggccgtcctcgac 194467 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tccgagatcaacaccaaccc 446 |||||||||||||||||||| Sbjct: 58944 tccgagatcaacaccaaccc 58925
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 72303 tcagggccgcctccagcctcggct 72280
>emb|AJ459818.1|LES459818 Lycopersicon esculentum psi14A gene for putative phosphatase, exons 1-4 Length = 2370 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 100 gtggtgttcgacttcgacaagaccatcatcga 131 ||||| ||||||||||||||||| || ||||| Sbjct: 855 gtggttttcgacttcgacaagacgattatcga 886
>emb|AJ459817.1|LES459817 Lycopersicon esculentum mRNA for putative phosphatase (psi14A gene) Length = 1198 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 100 gtggtgttcgacttcgacaagaccatcatcga 131 ||||| ||||||||||||||||| || ||||| Sbjct: 52 gtggttttcgacttcgacaagacgattatcga 83
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tggtggtgttcgacttcgac 117 |||||||||||||||||||| Sbjct: 4433505 tggtggtgttcgacttcgac 4433486
>gb|AC021649.18| Homo sapiens 3 BAC RP11-321F19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209521 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tcgccgccatcagggccgcc 333 |||||||||||||||||||| Sbjct: 32003 tcgccgccatcagggccgcc 32022
>gb|AY122108.1| Drosophila melanogaster GH12004 full insert cDNA Length = 4316 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 3595 ttcgaccccctgctgcccaccatg 3618
>gb|AE006010.1| Caulobacter crescentus CB15 section 336 of 359 of the complete genome Length = 10305 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 agggcaagaccctccgcgacgtcgccga 278 ||||||||||||||||| ||| |||||| Sbjct: 6640 agggcaagaccctccgctacgccgccga 6667
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 cttcatcgaggccgtcctcgacca 404 |||||||||||||| ||||||||| Sbjct: 1762945 cttcatcgaggccgacctcgacca 1762922
>ref|NM_164887.1| Drosophila melanogaster CG31714-RA (CG31714), mRNA Length = 4733 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 4030 ttcgaccccctgctgcccaccatg 4053
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 atcgaggccgtcctcgacca 404 |||||||||||||||||||| Sbjct: 1062805 atcgaggccgtcctcgacca 1062786
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 157045 ttcgaccccctgctgcccaccatg 157068
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 4682170 tcagggccgcctccagcctcggct 4682147
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgtcgccgccatcagggccg 331 |||||||||||||||||||| Sbjct: 4191405 cgtcgccgccatcagggccg 4191424
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 agccgcgtcgacgccgacggccgc 471 |||||||||||||| ||||||||| Sbjct: 16639119 agccgcgtcgacgcggacggccgc 16639096
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 cgcgtcgacgccgacggccgcctc 474 ||||||||||||| |||||||||| Sbjct: 28475827 cgcgtcgacgccgtcggccgcctc 28475804
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 1517470 tcagggccgcctccagcctcggct 1517447
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 tcgaggccgtcctcgaccaccacg 409 |||||||| ||||||||||||||| Sbjct: 8404739 tcgaggccctcctcgaccaccacg 8404762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cagccgcgtcgacgccgacg 466 |||||||||||||||||||| Sbjct: 736604 cagccgcgtcgacgccgacg 736623
>gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymerase gene, partial cds Length = 1702 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgtggtggtgttcgacttcg 115 |||||||||||||||||||| Sbjct: 621 cgtggtggtgttcgacttcg 640
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 tggccggcgtcgtggtggtgttcg 109 ||||||||| |||||||||||||| Sbjct: 4451 tggccggcggcgtggtggtgttcg 4428
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cgacggcctgggcgccaccg 175 |||||||||||||||||||| Sbjct: 5865638 cgacggcctgggcgccaccg 5865619
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 cgcgtcgacgccgacggccgcctc 474 ||||||||||||| |||||||||| Sbjct: 82860 cgcgtcgacgccgtcggccgcctc 82837
>dbj|AK106017.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B08, full insert sequence Length = 1342 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 tggccggcgtcgtggtggtgttcg 109 ||||||||| |||||||||||||| Sbjct: 1050 tggccggcggcgtggtggtgttcg 1073
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tcgagatggccggcgtcgtg 99 |||||||||||||||||||| Sbjct: 2905647 tcgagatggccggcgtcgtg 2905666
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgtggtggtgttcgacttcg 115 |||||||||||||||||||| Sbjct: 65465 cgtggtggtgttcgacttcg 65484
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 91323 ttcgaccccctgctgcccaccatg 91300
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tggtggtgttcgacttcgac 117 |||||||||||||||||||| Sbjct: 4436031 tggtggtgttcgacttcgac 4436012
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 gccgcgtcgacgccgacggccgcc 472 |||||| ||||||||||||||||| Sbjct: 84194 gccgcggcgacgccgacggccgcc 84171
>gb|AC005734.1|AC005734 Drosophila melanogaster DNA sequence (P1s DS00058 (D296), DS02068 (D297), and DS07249 (D318)), complete sequence Length = 155335 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ttcgaccgcctgctgcccaccatg 204 ||||||| |||||||||||||||| Sbjct: 29616 ttcgaccccctgctgcccaccatg 29593
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 agccgcgtcgacgccgacggccgc 471 |||||||||||||| ||||||||| Sbjct: 16647760 agccgcgtcgacgcggacggccgc 16647737
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cgtcgccgccatcagggccg 331 |||||||||||||||||||| Sbjct: 4200099 cgtcgccgccatcagggccg 4200118
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gtcaagtccaagaagaagga 76 |||||||||||||||||||| Sbjct: 1696426 gtcaagtccaagaagaagga 1696445
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 tcagggccgcctacagcctcggct 346 |||||||||||| ||||||||||| Sbjct: 111550 tcagggccgcctccagcctcggct 111527 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,844,243 Number of Sequences: 3902068 Number of extensions: 2844243 Number of successful extensions: 69820 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66178 Number of HSP's gapped (non-prelim): 3634 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
