Clone Name | bart06c05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SEM5B_HUMAN (Q9P283) Semaphorin-5B precursor | 30 | 3.7 | 2 | SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sem... | 29 | 8.3 |
---|
>SEM5B_HUMAN (Q9P283) Semaphorin-5B precursor| Length = 1093 Score = 30.0 bits (66), Expect = 3.7 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +1 Query: 448 QCCNTRGAWSCSISWICC 501 Q C RGAWSC SW C Sbjct: 847 QACPVRGAWSCWTSWSPC 864
>SEM5B_MOUSE (Q60519) Semaphorin-5B precursor (Semaphorin G) (Sema G)| Length = 1093 Score = 28.9 bits (63), Expect = 8.3 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 448 QCCNTRGAWSCSISWICC 501 Q C RGAWSC +W C Sbjct: 847 QACPVRGAWSCWTAWSQC 864 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,800,102 Number of Sequences: 219361 Number of extensions: 833238 Number of successful extensions: 2336 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2334 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)