ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF112963.1| Triticum aestivum chitinase II precursor (Cht2) mRNA, complete cds Length = 956 Score = 244 bits (123), Expect = 2e-61 Identities = 209/238 (87%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgg-- 343 ||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| | |||| Sbjct: 152 tggagagcgtcgtcaccgacgcgttcttcgacgggatcaagtcccaggccgccgacggcg 211 Query: 344 -gtgcgccggcnagagcttttacacgcgccggtcgttcctggccggcgcccgggcgaacc 402 |||| ||||| |||||||||||||||||| || ||||||| |||||||| |||||||| Sbjct: 212 ggtgccccggcaagagcttttacacgcgccagtttttcctggacggcgcccaggcgaacc 271 Query: 403 ccaacttcgggaaaggccgcacgaccgacgacgccnagagggagatagccgccttcttcg 462 || |||||||||||||| |||| | |||||||| | |||||||||||||||||||||||| Sbjct: 272 ccgacttcgggaaaggcggcaccagcgacgacggcaagagggagatagccgccttcttcg 331 Query: 463 cccacgtcacacacgagactggacacatgtgctacatcgaggagatcggcggggcgag 520 ||||| |||| |||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 332 cccacttcacccacgagactggatacatgtgctacatcgaggagaaggacggggcgag 389
>gb|AF112966.1| Triticum aestivum chitinase IV precursor (Cht4) mRNA, complete cds Length = 1088 Score = 220 bits (111), Expect = 4e-54 Identities = 206/238 (86%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacg--- 342 ||||| ||||||||||| | ||||||||| ||||||||||||||| ||| | | ||| Sbjct: 270 tggagagcgtcgtcaccgatgcgttcttcgacgggatcaagtcccaggcagccgacgagg 329 Query: 343 ggtgcgccggcnagagcttttacacgcgccggtcgttcctggccggcgcccgggcgaacc 402 ||||| ||||| |||||||||||||||||| || ||||||| |||||||| |||||||| Sbjct: 330 ggtgccccggcaagagcttttacacgcgccagtttttcctggacggcgcccaggcgaacc 389 Query: 403 ccaacttcgggaaaggccgcacgaccgacgacgccnagagggagatagccgccttcttcg 462 || |||||||||||||| |||| | |||||||| | |||||||||||||||||||||||| Sbjct: 390 ccgacttcgggaaaggcagcaccagcgacgacggcaagagggagatagccgccttcttcg 449 Query: 463 cccacgtcacacacgagactggacacatgtgctacatcgaggagatcggcggggcgag 520 | ||| ||| ||||||||||| |||||||||| ||||||||||| ||| |||||||| Sbjct: 450 ctcacttcatccacgagactgggcacatgtgctccatcgaggagaacggaggggcgag 507 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 88 tcttggcgctcggggtagcagcactagtcctgtctgccgcgggaatggtggccgcgcaga 147 ||||||| |||||| |||||||||||||||| |||| ||| ||| ||||||| ||||||| Sbjct: 84 tcttggctctcgggctagcagcactagtcctatctggcgccggactggtggcggcgcaga 143 Query: 148 agtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcgg 196 | |||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 144 actgcggctgccagccgaacgagtgctgcagcaagtacggttattgcgg 192
>ref|XM_473009.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 384 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 443 Query: 479 gactggacacatgtgctacatc 500 ||||||||| |||||||||||| Sbjct: 444 gactggacatatgtgctacatc 465 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 251 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 291
>dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128C09, full insert sequence Length = 1059 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 291 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 350 Query: 479 gactggacacatgtgctacatc 500 ||||||||| |||||||||||| Sbjct: 351 gactggacatatgtgctacatc 372 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 158 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 198
>dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H09, full insert sequence Length = 1078 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 290 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 349 Query: 479 gactggacacatgtgctacatc 500 ||||||||| |||||||||||| Sbjct: 350 gactggacatatgtgctacatc 371 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 157 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 197
>dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase IIb, complete cds Length = 1036 Score = 77.8 bits (39), Expect = 3e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 280 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 339 Query: 479 gactggacacatgtgctacatc 500 ||||||||| |||||||||||| Sbjct: 340 gactggacatatgtgctacatc 361 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 147 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 187
>gb|DQ190424.1| Sorghum halepense isolate hal6 chitinase-B (chib) gene, partial cds Length = 599 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 123 gagatcgccgccttcttcgcccacgtcacgcacgagaccggac 165
>gb|DQ190423.1| Sorghum halepense isolate hal4 chitinase-B (chib) gene, partial cds Length = 599 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 123 gagatcgccgccttcttcgcccacgtcacgcacgagaccggac 165
>gb|DQ190422.1| Sorghum halepense isolate hal3 chitinase-B (chib) gene, partial cds Length = 598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 123 gagatcgccgccttcttcgcccacgtcacgcacgagaccggac 165
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds Length = 922 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 340 gagatcgccgccttcttcgcccacgtcacgcacgagaccggac 382
>ref|XM_473013.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 418 gagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgctacatc 474 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Plus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 266 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 325 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 326 gcaagaacttttacac 341
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 24664379 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 24664339 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 24664246 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 24664187 Query: 479 gactggac 486 |||||||| Sbjct: 24664186 gactggac 24664179 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Minus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 24684848 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 24684789 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 24684788 gcaagaacttttacac 24684773 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 137 ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 190 |||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||| Sbjct: 24648256 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 24648203
>dbj|AK104426.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G08, full insert sequence Length = 984 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 453 gagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgctacatc 509 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Plus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 301 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 360 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 361 gcaagaacttttacac 376
>dbj|AK104242.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C08, full insert sequence Length = 1022 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 453 gagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgctacatc 509 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Plus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 301 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 360 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 361 gcaagaacttttacac 376
>dbj|AK071013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F19, full insert sequence Length = 1083 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 454 gagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgctacatc 510 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Plus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 302 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 361 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 362 gcaagaacttttacac 377
>gb|AY103546.1| Zea mays PCO155066 mRNA sequence Length = 1179 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| |||||||||||||| |||||||| |||||||| ||||| | ||||||||| Sbjct: 470 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggacatttctgctacatc 526 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 143 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 202 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 203 acgaccgacgcctac 217
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 92430 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 92390 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 92297 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 92238 Query: 479 gactggac 486 |||||||| Sbjct: 92237 gactggac 92230 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 137 ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 190 |||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||| Sbjct: 87207 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 87154
>dbj|AB096140.1| Oryza sativa (japonica cultivar-group) chia4a mRNA for chitinase, complete cds Length = 1067 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| || |||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 438 gagatcgctgccttctttgcccacgtcactcatgagaccggacatatgtgctacatc 494 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Plus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 286 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 345 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 346 gcaagaacttttacac 361
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 53902 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 53862 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 53769 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 53710 Query: 479 gactggac 486 |||||||| Sbjct: 53709 gactggac 53702 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/76 (82%) Strand = Plus / Minus Query: 292 gcgtcgtcaccaaggcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccg 351 |||| |||||| ||||||||||||| ||||||||| || |||| |||| ||||||| Sbjct: 74371 gcgtggtcaccgaggcgttcttcaatgggatcaagaaccaggccccgaacggttgcgccg 74312 Query: 352 gcnagagcttttacac 367 || ||| ||||||||| Sbjct: 74311 gcaagaacttttacac 74296 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 137 ggccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggtta 190 |||||||||||| ||||||||| ||||||| ||||||||||| ||| ||||| Sbjct: 37779 ggccgcgcagaactgcggctgcgcggcgaacttgtgctgcagccagtatggtta 37726
>gb|M84164.1|MZECHITA Zea mays chitinase A (seed chitinase) gene, complete cds Length = 843 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggacacatgtgctacatc 500 ||||| |||||||||||||| |||||||| |||||||| ||||| | ||||||||| Sbjct: 397 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggacatttctgctacatc 453 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 70 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 129 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 130 acgaccgacgcctac 144
>dbj|AB054811.1| Oryza sativa (indica cultivar-group) gene for PR-3 class IV chitinase, complete cds Length = 2187 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 827 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 886 Query: 479 gactggac 486 |||||||| Sbjct: 887 gactggac 894 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 694 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 734
>dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene for PR-3 class IV chitinase, complete cds Length = 2172 Score = 58.0 bits (29), Expect = 3e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 419 ccgcacgaccgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacga 478 |||||| | ||||||| || || | ||||| || ||||||||||| || ||||||||||| Sbjct: 1053 ccgcaccaacgacgactccaagcgcgagatcgctgccttcttcgcgcatgtcacacacga 1112 Query: 479 gactggac 486 |||||||| Sbjct: 1113 gactggac 1120 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 286 tggagggcgtcgtcaccaaggcgttcttcaacgggatcaag 326 ||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 920 tggagagcgtggtcaccgaggcgttcttcaacgggatcaag 960
>gb|AY532788.1| Zea diploperennis isolate d8 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532787.1| Zea diploperennis isolate d7 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532786.1| Zea diploperennis isolate d6 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532785.1| Zea diploperennis isolate d5 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532784.1| Zea diploperennis isolate d4 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532783.1| Zea diploperennis isolate d3 chitinase (chiA) gene, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532782.1| Zea diploperennis isolate d2 chitinase (chiA) gene, complete cds Length = 1104 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 402 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 444
>gb|AY532781.1| Zea diploperennis isolate d1 chitinase (chiA) gene, complete cds Length = 1107 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532780.1| Zea mays subsp. parviglumis isolate p14 chitinase (chiA) gene, complete cds Length = 1131 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 411 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 453 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532779.1| Zea mays subsp. parviglumis isolate p13b chitinase (chiA) gene, complete cds Length = 1094 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 414 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 456
>gb|AY532778.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiA) gene, complete cds Length = 1094 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 414 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 456
>gb|AY532775.1| Zea mays subsp. parviglumis isolate p9 chitinase (chiA) gene, complete cds Length = 1094 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 420 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 462 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532774.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiA) gene, complete cds Length = 1132 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 420 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 462 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 99 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 158 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 159 acgaccgacgcctac 173
>gb|AY532773.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiA) gene, complete cds Length = 1118 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 417 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 459 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 99 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 158 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 159 acgaccgacgcctac 173
>gb|AY532771.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiA) gene, complete cds Length = 1122 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 450 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532770.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiA) gene, complete cds Length = 1101 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 414 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 456 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532769.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiA) gene, complete cds Length = 1120 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 402 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 444 Score = 40.1 bits (20), Expect = 7.1 Identities = 51/62 (82%) Strand = Plus / Plus Query: 306 gcgttcttcaacgggatcaagtcccgggccggcnacgggtgcgccggcnagagcttttac 365 |||||||||||||| |||||| || |||||| |||||||| ||| ||||||| ||| Sbjct: 264 gcgttcttcaacggcatcaagaaccaggccgggagcgggtgcgagggcaagagcttctac 323 Query: 366 ac 367 || Sbjct: 324 ac 325
>gb|AY532768.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiA) gene, complete cds Length = 1115 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 414 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 456 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532767.1| Tripsacum dactyloides chitinase (chiA) gene, complete cds Length = 967 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 388 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 430
>gb|AF402937.1|AF402937 Saccharum officinarum chitinase-B gene, partial cds Length = 914 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| |||||||| |||||||| |||| Sbjct: 340 gagatcgccgccttcttcgcgcacgtcacgcacgagaccggac 382 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| | ||||||||| || ||| || |||||| Sbjct: 46 gccgcgcagaactgcggctgccagccaaactactgctgcagcaagttcgggtactgcggc 105 Query: 198 actaccgacgcctac 212 || ||||||| |||| Sbjct: 106 acgaccgacgactac 120
>gb|AY532721.1| Tripsacum dactyloides chitinase (chiB) gene, complete cds Length = 985 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | ||||| |||||||||| || ||| || |||||| Sbjct: 102 gccgcgcagaactgcggctgccagccgaacatgtgctgcagcaagttcggctactgcggc 161 Query: 198 actaccgacg 207 || ||||||| Sbjct: 162 acgaccgacg 171 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 414 gagatcgccgccttcttcgcgcacgccacgcacgagac 451
>gb|AF532966.1| Vitis vinifera class IV chitinase (Chi4D) mRNA, complete cds Length = 1103 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 456 ttcttcgcccacgtcacacacgagactggacac 488 |||||||| || ||||||||||||||||||||| Sbjct: 409 ttcttcgctcatgtcacacacgagactggacac 441
>gb|U97522.1|VVU97522 Vitis vinifera class IV endochitinase (VvChi4B) mRNA, complete cds Length = 1071 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 456 ttcttcgcccacgtcacacacgagactggacac 488 |||||||| || ||||||||||||||||||||| Sbjct: 387 ttcttcgctcatgtcacacacgagactggacac 419
>gb|U97521.1|VVU97521 Vitis vinifera class IV endochitinase (VvChi4A) mRNA, complete cds Length = 1071 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 456 ttcttcgcccacgtcacacacgagactggacac 488 |||||||| || ||||||||||||||||||||| Sbjct: 382 ttcttcgctcatgtcacacacgagactggacac 414
>ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 48.1 bits (24), Expect = 0.029 Identities = 68/83 (81%) Strand = Plus / Plus Query: 428 cgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacgagactggaca 487 ||||||| || || | ||||| ||||||||||||||||||| || |||||||| | | Sbjct: 394 cgacgactccaagcgcgagatcgccgccttcttcgcccacgccaaccacgagaccataaa 453 Query: 488 catgtgctacatcgaggagatcg 510 | ||||||||||||||||||| Sbjct: 454 gttctgctacatcgaggagatcg 476
>dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G01, full insert sequence Length = 976 Score = 48.1 bits (24), Expect = 0.029 Identities = 68/83 (81%) Strand = Plus / Plus Query: 428 cgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacgagactggaca 487 ||||||| || || | ||||| ||||||||||||||||||| || |||||||| | | Sbjct: 394 cgacgactccaagcgcgagatcgccgccttcttcgcccacgccaaccacgagaccataaa 453 Query: 488 catgtgctacatcgaggagatcg 510 | ||||||||||||||||||| Sbjct: 454 gttctgctacatcgaggagatcg 476
>gb|AY532777.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiA) gene, complete cds Length = 1128 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| |||||||||||||| ||||| || |||||||| |||| Sbjct: 411 gagatcgccgccttcttcgcgcacgttacgcacgagaccggac 453 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 93 gccgcgcagaactgcggctgccagccaaacttctgctgcagcaagttcggctactgcggc 152 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 153 acgaccgacgcctac 167
>gb|AY532776.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiA) gene, complete cds Length = 1127 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| || ||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgcagccttcttcgcgcacgtcacgcacgagaccggac 450
>gb|AY532772.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiA) gene, complete cds Length = 1104 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagactggac 486 ||||| || ||||||||||| |||||||| |||||||| |||| Sbjct: 408 gagatcgcagccttcttcgcgcacgtcacgcacgagaccggac 450 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | ||| ||||||||| || ||| || |||||| Sbjct: 99 gccgcgcagaactgcggctgccagcctaacttctgctgcagcaagttcggctactgcggc 158 Query: 198 actaccgacgcctac 212 || |||||||||||| Sbjct: 159 acgaccgacgcctac 173
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 502 aggagatcggcggggcgaggcag 524 ||||||||||||||||||||||| Sbjct: 23149258 aggagatcggcggggcgaggcag 23149280
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 46/54 (85%) Strand = Plus / Minus Query: 428 cgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacgagac 481 ||||||| || || | ||||| ||||||||||||||||||| || |||||||| Sbjct: 23763109 cgacgactccaagcgcgagatcgccgccttcttcgcccacgccaaccacgagac 23763056
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 502 aggagatcggcggggcgaggcag 524 ||||||||||||||||||||||| Sbjct: 72357 aggagatcggcggggcgaggcag 72379
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 46.1 bits (23), Expect = 0.11 Identities = 46/54 (85%) Strand = Plus / Minus Query: 428 cgacgacgccnagagggagatagccgccttcttcgcccacgtcacacacgagac 481 ||||||| || || | ||||| ||||||||||||||||||| || |||||||| Sbjct: 73693 cgacgactccaagcgcgagatcgccgccttcttcgcccacgccaaccacgagac 73640
>gb|BT016363.1| Zea mays clone Contig196 mRNA sequence Length = 1079 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 429 gagatcgccgccttcttcgcgcacgccacgcacgagac 466 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 120 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcgggtactgcggc 179 Query: 198 actaccgacg 207 || ||||||| Sbjct: 180 acgaccgacg 189
>gb|BT016338.1| Zea mays clone Contig171 mRNA sequence Length = 1186 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 421 gagatcgccgccttcttcgcgcacgccacgcacgagac 458 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 127 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 186 Query: 198 actaccgacg 207 || ||||||| Sbjct: 187 acgaccgacg 196
>gb|AY532742.1| Zea diploperennis isolate d8 chitinase (chiB) gene, complete cds Length = 1081 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532741.1| Zea diploperennis isolate d7 chitinase (chiB) gene, complete cds Length = 1111 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532740.1| Zea diploperennis isolate d6 chitinase (chiB) gene, complete cds Length = 1128 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 428 gagatcgccgccttcttcgcgcacgccacgcacgagac 465 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532739.1| Zea diploperennis isolate d5 chitinase (chiB) gene, complete cds Length = 1080 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532738.1| Zea diploperennis isolate d4 chitinase (chiB) gene, complete cds Length = 1081 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532737.1| Zea diploperennis isolate d2 chitinase (chiB) gene, complete cds Length = 1081 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532736.1| Zea diploperennis isolate d1 chitinase (chiB) gene, complete cds Length = 1122 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 404 gagatcgccgccttcttcgcgcacgccacgcacgagac 441
>gb|AY532735.1| Zea mays subsp. parviglumis isolate p15 chitinase (chiB) gene, complete cds Length = 1121 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 407 gagatcgccgccttcttcgcgcacgccacgcacgagac 444
>gb|AY532734.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiB) gene, complete cds Length = 1134 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 422 gagatcgccgccttcttcgcgcacgccacgcacgagac 459 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 113 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 172 Query: 198 actaccgacg 207 || ||||||| Sbjct: 173 acgaccgacg 182
>gb|AY532733.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiB) gene, complete cds Length = 1127 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 410 gagatcgccgccttcttcgcgcacgccacgcacgagac 447 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532732.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiB) gene, complete cds Length = 1126 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 413 gagatcgccgccttcttcgcgcacgccacgcacgagac 450 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532731.1| Zea mays subsp. parviglumis isolate p11b chitinase (chiB) gene, complete cds Length = 1140 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 410 gagatcgccgccttcttcgcgcacgccacgcacgagac 447 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532730.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiB) gene, complete cds Length = 1127 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 416 gagatcgccgccttcttcgcgcacgccacgcacgagac 453 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166 Query: 198 actaccgacg 207 || ||||||| Sbjct: 167 acgaccgacg 176
>gb|AY532729.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiB) gene, complete cds Length = 1123 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 413 gagatcgccgccttcttcgcgcacgccacgcacgagac 450 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 104 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 163 Query: 198 actaccgacg 207 || ||||||| Sbjct: 164 acgaccgacg 173
>gb|AY532728.1| Zea mays subsp. parviglumis isolate p5b chitinase (chiB) gene, complete cds Length = 1138 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 407 gagatcgccgccttcttcgcgcacgccacgcacgagac 444 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166 Query: 198 actaccgacg 207 || ||||||| Sbjct: 167 acgaccgacg 176
>gb|AY532727.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiB) gene, complete cds Length = 1133 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 416 gagatcgccgccttcttcgcgcacgccacgcacgagac 453 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 107 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 166 Query: 198 actaccgacg 207 || ||||||| Sbjct: 167 acgaccgacg 176
>gb|AY532726.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiB) gene, complete cds Length = 1123 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 410 gagatcgccgccttcttcgcgcacgccacgcacgagac 447 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532725.1| Zea mays subsp. parviglumis isolate p3b chitinase (chiB) gene, complete cds Length = 1114 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 410 gagatcgccgccttcttcgcgcacgccacgcacgagac 447 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532724.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiB) gene, complete cds Length = 1138 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 422 gagatcgccgccttcttcgcgcacgccacgcacgagac 459 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>gb|AY532723.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiB) gene, complete cds Length = 1127 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 407 gagatcgccgccttcttcgcgcacgccacgcacgagac 444
>gb|AY532722.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiB) gene, complete cds Length = 1130 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 413 gagatcgccgccttcttcgcgcacgccacgcacgagac 450 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 101 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 160 Query: 198 actaccgacg 207 || ||||||| Sbjct: 161 acgaccgacg 170
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 378 ttcctggccggcgcccgggcga 399 |||||||||||||||||||||| Sbjct: 3087283 ttcctggccggcgcccgggcga 3087262
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds Length = 927 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 343 gagatcgccgctttcttcgcccatgtcacccacgagac 380
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds Length = 819 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 373 gagatcgccgctttcttcgcccatgtcacccacgagac 410
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds Length = 789 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 343 gagatcgccgctttcttcgcccatgtcacccacgagac 380
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds Length = 922 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 343 gagatcgccgctttcttcgcccatgtcacccacgagac 380
>gb|M84165.1|MZECHITB Zea mays chitinase B (seed chitinase) gene, 3'end Length = 810 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 444 gagatagccgccttcttcgcccacgtcacacacgagac 481 ||||| |||||||||||||| |||| ||| |||||||| Sbjct: 364 gagatcgccgccttcttcgcgcacgccacgcacgagac 401 Score = 44.1 bits (22), Expect = 0.45 Identities = 58/70 (82%) Strand = Plus / Plus Query: 138 gccgcgcagaagtgcggctgccgggcgaacgagtgctgcagccggtacggttattgcggc 197 ||||||||||| |||||||||| | | |||| ||||||||| || ||| || |||||| Sbjct: 55 gccgcgcagaactgcggctgccagccaaacgtctgctgcagcaagttcggctactgcggc 114 Query: 198 actaccgacg 207 || ||||||| Sbjct: 115 acgaccgacg 124
>gb|AY514119.1| Sorghum bicolor clone 0318-SC0706b RFLP probe pSB0318 Length = 375 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514118.1| Sorghum bicolor clone 0318-SC0706a RFLP probe pSB0318 Length = 375 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514116.1| Sorghum bicolor clone 0318-SC0326 RFLP probe pSB0318 Length = 372 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514115.1| Sorghum arundinaceum clone 0318-LWA8 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514114.1| Sorghum bicolor clone 0318-92381 RFLP probe pSB0318 Length = 360 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514113.1| Sorghum bicolor clone 0318-56003 RFLP probe pSB0318 Length = 393 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgtggcgaggca 76
>gb|AY514112.1| Sorghum bicolor clone 0318-514605 RFLP probe pSB0318 Length = 360 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514111.1| Sorghum bicolor clone 0318-51030 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514110.1| Sorghum bicolor clone 0318-50875 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514109.1| Sorghum bicolor clone 0318-257595 RFLP probe pSB0318 Length = 331 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514108.1| Sorghum bicolor clone 0318-246712 RFLP probe pSB0318 Length = 360 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514107.1| Sorghum bicolor clone 0318-22913 RFLP probe pSB0318 Length = 360 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514106.1| Sorghum arundinaceum clone 0318-225905 RFLP probe pSB0318 Length = 360 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgtggcgaggca 76
>gb|AY514105.1| Sorghum bicolor clone 0318-152702 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514104.1| Sorghum bicolor clone 0318-102069 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514103.1| Sorghum bicolor clone 0318-RTx430 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AY514102.1| Sorghum bicolor clone 0318-BTx3197 RFLP probe pSB0318 Length = 399 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 cgaggagatcggcggggcgaggca 523 |||||||||||||| ||||||||| Sbjct: 53 cgaggagatcggcgcggcgaggca 76
>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2 Length = 230573 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctgccgcgggaatggtggccgcgcagaa 148 ||||||||||||||| ||||||| |||| Sbjct: 5825 ctgccgcgggaatggaggccgcgaagaa 5852
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 121 ctgccgcgggaatggtggccgcgcagaa 148 ||||||||||||||| ||||||| |||| Sbjct: 2064310 ctgccgcgggaatggaggccgcgaagaa 2064337 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,030,640 Number of Sequences: 3902068 Number of extensions: 2030640 Number of successful extensions: 43534 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43102 Number of HSP's gapped (non-prelim): 419 length of query: 524 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 501 effective length of database: 17,143,297,704 effective search space: 8588792149704 effective search space used: 8588792149704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
