ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, comp... 50 0.006
2emb|CR636440.2|CNS0EQ1Q Tetraodon nigroviridis full-length cDNA 44 0.40
3gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipie... 44 0.40
4dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
5gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride cha... 42 1.6
6gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride cha... 42 1.6
7ref|NM_000164.2| Homo sapiens gastric inhibitory polypeptide rec... 40 6.2
8gb|BC101673.1| Homo sapiens gastric inhibitory polypeptide recep... 40 6.2
9gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.2
10ref|XM_465613.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
11ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
12ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747),... 40 6.2
13gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, c... 40 6.2
14gb|AY356068.1| Canis familiaris isolate cOR56A24 olfactory recep... 40 6.2
15gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal... 40 6.2
16ref|XM_989990.1| PREDICTED: Mus musculus YTH domain containing 2... 40 6.2
17ref|XM_910737.2| PREDICTED: Mus musculus YTH domain containing 2... 40 6.2
18ref|XM_140310.8| PREDICTED: Mus musculus YTH domain containing 2... 40 6.2
19ref|XM_976894.1| PREDICTED: Mus musculus similar to PDZ domain c... 40 6.2
20ref|XM_897627.2| PREDICTED: Mus musculus PDZ domain containing 2... 40 6.2
21ref|XM_920266.2| PREDICTED: Mus musculus PDZ domain containing 2... 40 6.2
22gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosom... 40 6.2
23ref|XM_845489.1| PREDICTED: Canis familiaris similar to Ephrin-A... 40 6.2
24emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O... 40 6.2
25emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 6.2
26gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complet... 40 6.2
27gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete... 40 6.2
28dbj|AK159017.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 40 6.2
29dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.2
30gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.2
31gb|S79852.1| glucose-dependent insulinotropic polypeptide recept... 40 6.2
32dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.2
33gb|BC095494.1| Homo sapiens gastric inhibitory polypeptide recep... 40 6.2
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 40 6.2
38gb|BC093723.1| Homo sapiens gastric inhibitory polypeptide recep... 40 6.2
39dbj|D49559.2| Homo sapiens gene for gastric inhibitory polypepti... 40 6.2
40gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, com... 40 6.2
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.2
42dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
43dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
44dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
45dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
46emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA g... 40 6.2
47gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 6.2
48gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072... 40 6.2
49gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204... 40 6.2
50gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.2
51gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.2
52gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, comple... 40 6.2
53gb|U39231.1|HSU39231 Human GIP receptor (GIPR) mRNA, complete cds 40 6.2
54emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chro... 40 6.2
55emb|X81832.1|HSGDIPR H.sapiens mRNA for glucose-dependant insuli... 40 6.2 
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence
          Length = 183307

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 238    tcctccggctcccctcccaccgccgcccctgcc 270
              |||||| |||||||||||||||| |||||||||
Sbjct: 148143 tcctccagctcccctcccaccgcagcccctgcc 148111
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>emb|CR636440.2|CNS0EQ1Q Tetraodon nigroviridis full-length cDNA
          Length = 1186

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 384  gagcttgcccgcggggaagagg 405
            ||||||||||||||||||||||
Sbjct: 1108 gagcttgcccgcggggaagagg 1087
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>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940127D9, complete sequence
          Length = 102832

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 216   gccgtcgccgtggacgagggcg 237
             ||||||||||||||||||||||
Sbjct: 74858 gccgtcgccgtggacgagggcg 74837
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 334     ccggcccgggcgaggtccgcg 354
               |||||||||||||||||||||
Sbjct: 5828977 ccggcccgggcgaggtccgcg 5828997
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>gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride channel mRNA, complete cds
          Length = 2344

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 253 cccaccgccgcccctgccacc 273
           |||||||||||||||||||||
Sbjct: 674 cccaccgccgcccctgccacc 654
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>gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride channel mRNA, complete cds
          Length = 2553

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 253 cccaccgccgcccctgccacc 273
           |||||||||||||||||||||
Sbjct: 721 cccaccgccgcccctgccacc 701
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>ref|NM_000164.2| Homo sapiens gastric inhibitory polypeptide receptor (GIPR), mRNA
          Length = 2024

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1401 ctccggcccgggcgaggtcc 1420
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>gb|BC101673.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA
            clone MGC:126722 IMAGE:8069179), complete cds
          Length = 1540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1388 ctccggcccgggcgaggtcc 1407
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     caccgtcacctctggtgggc 295
               ||||||||||||||||||||
Sbjct: 1785339 caccgtcacctctggtgggc 1785358
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>ref|XM_465613.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 285

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 ccacctccaccgtcacctct 288
           ||||||||||||||||||||
Sbjct: 175 ccacctccaccgtcacctct 156
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>ref|NM_190668.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  ccgccgcccctgccacctcc 276
            ||||||||||||||||||||
Sbjct: 1207 ccgccgcccctgccacctcc 1188
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>ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747), mRNA
          Length = 3339

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 243  cggctcccctcccaccgccgcccc 266
            ||||||||| ||||||||||||||
Sbjct: 3030 cggctccccccccaccgccgcccc 3007
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>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence
          Length = 213513

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 257    ccgccgcccctgccacctccaccg 280
              |||||||| |||||||||||||||
Sbjct: 167026 ccgccgccactgccacctccaccg 167003
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>gb|AY356068.1| Canis familiaris isolate cOR56A24 olfactory receptor family 56
           subfamily A-like gene, partial sequence
          Length = 670

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  ctcctcttcctcctggccgt 91
           ||||||||||||||||||||
Sbjct: 609 ctcctcttcctcctggccgt 590
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>gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal RNA gene, partial
           sequence
          Length = 960

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 ccctcccaccgccgcccctg 268
           ||||||||||||||||||||
Sbjct: 276 ccctcccaccgccgcccctg 295
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>ref|XM_989990.1| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA
          Length = 6276

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ccgccgcccctgccacctccaccg 280
           |||||||| |||||||||||||||
Sbjct: 86  ccgccgccactgccacctccaccg 63
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>ref|XM_910737.2| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA
          Length = 6276

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ccgccgcccctgccacctccaccg 280
           |||||||| |||||||||||||||
Sbjct: 86  ccgccgccactgccacctccaccg 63
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>ref|XM_140310.8| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA
          Length = 6276

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ccgccgcccctgccacctccaccg 280
           |||||||| |||||||||||||||
Sbjct: 86  ccgccgccactgccacctccaccg 63
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>ref|XM_976894.1| PREDICTED: Mus musculus similar to PDZ domain containing 2
           (LOC669751), mRNA
          Length = 1317

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 256 accgccgcccctgccacctccacc 279
           |||||||||||||||||| |||||
Sbjct: 846 accgccgcccctgccaccaccacc 823
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>ref|XM_897627.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant
           5 (Pdzd2), mRNA
          Length = 4071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 256 accgccgcccctgccacctccacc 279
           |||||||||||||||||| |||||
Sbjct: 229 accgccgcccctgccaccaccacc 206
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>ref|XM_920266.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant
           9 (Pdzd2), mRNA
          Length = 4071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 256 accgccgcccctgccacctccacc 279
           |||||||||||||||||| |||||
Sbjct: 229 accgccgcccctgccaccaccacc 206
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>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete
             sequence
          Length = 206967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   accgccgcccctgccacctccacc 279
             |||||||||||||||||| |||||
Sbjct: 60792 accgccgcccctgccaccaccacc 60769
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>ref|XM_845489.1| PREDICTED: Canis familiaris similar to Ephrin-A5 precursor
           (EPH-related receptor tyrosine kinase ligand 7) (LERK-7)
           (AL-1) (LOC608458), mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  ctcctcttcctcctggccgt 91
           ||||||||||||||||||||
Sbjct: 967 ctcctcttcctcctggccgt 986
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>emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O18 on chromosome 1p32.3-34.1
             Contains GSSs, complete sequence
          Length = 101453

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   ggaagagcccagggatgctg 423
             ||||||||||||||||||||
Sbjct: 60949 ggaagagcccagggatgctg 60968
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   gagctggaggcggtcgcggagccg 446
             |||||||||||| |||||||||||
Sbjct: 78733 gagctggaggcgatcgcggagccg 78710
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>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence
          Length = 115385

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 262   gcccctgccacctccaccgtcacc 285
             ||||| ||||||||||||||||||
Sbjct: 31364 gcccccgccacctccaccgtcacc 31341
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>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence
          Length = 127223

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 262    gcccctgccacctccaccgtcacc 285
              ||||| ||||||||||||||||||
Sbjct: 122778 gcccccgccacctccaccgtcacc 122755
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>dbj|AK159017.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K530033M09 product:PDZ domain containing
           3, full insert sequence
          Length = 4071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 256 accgccgcccctgccacctccacc 279
           |||||||||||||||||| |||||
Sbjct: 229 accgccgcccctgccaccaccacc 206
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>dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630230M04
           product:hypothetical Alanine-rich region profile
           containing protein, full insert sequence
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 ccgccgcccctgccacctccaccg 280
           |||||||| |||||||||||||||
Sbjct: 135 ccgccgccactgccacctccaccg 158
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     ggcgaggtccgcgaccatcc 361
               ||||||||||||||||||||
Sbjct: 5225038 ggcgaggtccgcgaccatcc 5225019
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>gb|S79852.1| glucose-dependent insulinotropic polypeptide receptor [human,
            insulinoma cells, mRNA Partial, 1849 nt]
          Length = 1849

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1396 ctccggcccgggcgaggtcc 1415
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>dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330025A21 product:hypothetical protein,
           full insert sequence
          Length = 1179

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 ccgccgcccctgccacctccaccg 280
           |||||||| |||||||||||||||
Sbjct: 153 ccgccgccactgccacctccaccg 176
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>gb|BC095494.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA
            clone IMAGE:7002006), partial cds
          Length = 1399

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1300 ctccggcccgggcgaggtcc 1319
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 61       tcgccgtgcttctcctcttc 80
                ||||||||||||||||||||
Sbjct: 16168137 tcgccgtgcttctcctcttc 16168156
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 269      ccacctccaccgtcacctct 288
                ||||||||||||||||||||
Sbjct: 16353272 ccacctccaccgtcacctct 16353253
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 257      ccgccgcccctgccacctcc 276
                ||||||||||||||||||||
Sbjct: 37006392 ccgccgcccctgccacctcc 37006373
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>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160039

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ggaagagcccagggatgctg 423
             ||||||||||||||||||||
Sbjct: 39991 ggaagagcccagggatgctg 39972
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>gb|BC093723.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA
            clone MGC:120758 IMAGE:7939568), complete cds
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1388 ctccggcccgggcgaggtcc 1407
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>dbj|D49559.2| Homo sapiens gene for gastric inhibitory polypeptide receptor, complete
             cds
          Length = 13809

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   ctccggcccgggcgaggtcc 351
             ||||||||||||||||||||
Sbjct: 13698 ctccggcccgggcgaggtcc 13717
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>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence
          Length = 182230

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   tcccctcccaccgccgcccctgcc 270
             |||||||||||| |||||||||||
Sbjct: 63951 tcccctcccaccaccgcccctgcc 63974
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 225     gtggacgagggcgtcctccggctc 248
               |||||||||||| |||||||||||
Sbjct: 2286463 gtggacgagggcatcctccggctc 2286440
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1402_H07
          Length = 140620

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ccgccgcccctgccacctcc 276
             ||||||||||||||||||||
Sbjct: 96696 ccgccgcccctgccacctcc 96677
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683F02
          Length = 153388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  ccgccgcccctgccacctcc 276
            ||||||||||||||||||||
Sbjct: 7533 ccgccgcccctgccacctcc 7514
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>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419C03
          Length = 146929

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   ccacctccaccgtcacctct 288
             ||||||||||||||||||||
Sbjct: 38938 ccacctccaccgtcacctct 38919
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>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0040M10
          Length = 162790

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tcgccgtgcttctcctcttc 80
             ||||||||||||||||||||
Sbjct: 72930 tcgccgtgcttctcctcttc 72949
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>emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA gene, isolate A330
          Length = 1097

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 ccctcccaccgccgcccctg 268
           ||||||||||||||||||||
Sbjct: 275 ccctcccaccgccgcccctg 294
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gcccgggcgaggtccgcgac 356
              ||||||||||||||||||||
Sbjct: 171853 gcccgggcgaggtccgcgac 171834
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>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence
          Length = 43390

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1765 ctccggcccgggcgaggtcc 1784
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>gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204, complete sequence
          Length = 41572

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   ctccggcccgggcgaggtcc 351
             ||||||||||||||||||||
Sbjct: 41182 ctccggcccgggcgaggtcc 41201
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     tcgacgtcgtgcccaccgag 386
               ||||||||||||||||||||
Sbjct: 1907369 tcgacgtcgtgcccaccgag 1907350
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 424     agctggaggcggtcgcggag 443
               ||||||||||||||||||||
Sbjct: 2973418 agctggaggcggtcgcggag 2973399
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>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence
          Length = 203369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   gggaagaggaagagcccagg 416
             ||||||||||||||||||||
Sbjct: 44634 gggaagaggaagagcccagg 44653
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>gb|U39231.1|HSU39231 Human GIP receptor (GIPR) mRNA, complete cds
          Length = 2025

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1401 ctccggcccgggcgaggtcc 1420
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>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete
              sequence
          Length = 247743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    ggaagaggaagagcccaggg 417
              ||||||||||||||||||||
Sbjct: 109506 ggaagaggaagagcccaggg 109525
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>emb|X81832.1|HSGDIPR H.sapiens mRNA for glucose-dependant insulinotropic polypeptide
            receptor gene
          Length = 2181

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ctccggcccgggcgaggtcc 351
            ||||||||||||||||||||
Sbjct: 1863 ctccggcccgggcgaggtcc 1882


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,465,950
Number of Sequences: 3902068
Number of extensions: 3465950
Number of successful extensions: 124137
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123251
Number of HSP's gapped (non-prelim): 886
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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