>NPS13_ARATH (Q9LRP1) Novel plant SNARE 13 (AtNPSN13)|
          Length = 269

 Score =  125 bits (315), Expect = 4e-29
 Identities = 62/82 (75%), Positives = 71/82 (86%)
 Frame = +3

Query: 204 ASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKMRECKRLIXE 383
           AS++PMSP+LEQI GEI+D FRAL NGFQ++DKIKDS RQSKQLEELT KMRECKRL+ E
Sbjct: 2   ASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKE 61

Query: 384 FDRVLXDEEXRNTSKVNKQLID 449
           FDR L DEE RN+ +VNKQL D
Sbjct: 62  FDRELKDEEARNSPEVNKQLND 83

>NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)|
          Length = 265

 Score =  119 bits (298), Expect = 3e-27
 Identities = 59/82 (71%), Positives = 68/82 (82%)
 Frame = +3

Query: 204 ASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKMRECKRLIXE 383
           AS++PMSP LEQI GEI+D FRAL NGFQ++DKIKDS RQSKQLEEL  KMR+CKRL+ E
Sbjct: 2   ASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKE 61

Query: 384 FDRVLXDEEXRNTSKVNKQLID 449
           FDR L D E RN+ +VNKQL D
Sbjct: 62  FDRELKDGEARNSPQVNKQLND 83

>NPS11_ARATH (Q944A9) Novel plant SNARE 11 (AtNPSN11)|
          Length = 265

 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 45/77 (58%), Positives = 58/77 (75%)
 Frame = +3

Query: 219 MSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKMRECKRLIXEFDRVL 398
           +S EL +I+G+I DIFRAL NGFQK++KIKD+ RQS+QLEELT KMR+CK LI +FDR +
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 399 XDEEXRNTSKVNKQLID 449
              E  N +  N+ L D
Sbjct: 67  KSLESGNDASTNRMLND 83

>RAD50_ARCFU (O29230) DNA double-strand break repair rad50 ATPase|
          Length = 886

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +3

Query: 249 EIQDIFRALQNGFQKIDKIKDSXRQS-KQLEELTGKMRECKRLIXEFDRVLXDEEXRNTS 425
           E++D    L++  ++ +K++D   ++  +LEE  GK  E +  I E  R+  +EE R  S
Sbjct: 605 ELKDAESRLESELKRREKLEDEISEAIAKLEEANGKAEEIRGQIDELLRIYSEEEHRRLS 664

>LAML2_CAEEL (Q21313) Laminin-like protein K08C7.3 precursor|
          Length = 3672

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 198  MAASDVPMSPELEQ-IDGEIQDIFRALQNGFQKIDKIKDSXR-QSKQLEELTGKMRECKR 371
            + A+     PE  Q + G++++I + +Q   +K+DK K++   Q K+ EEL   +   ++
Sbjct: 2288 LEAASADQYPEKAQTVPGKLEEIQKKIQEETEKLDKQKETFEAQKKRAEELAAYLNSAQQ 2347

Query: 372  LIXE 383
            L+ E
Sbjct: 2348 LLKE 2351

>TPM1_YEAST (P17536) Tropomyosin 1|
          Length = 199

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +3

Query: 195 AMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEE----LTGKMRE 362
           ++   +  +  E+E+++  + D  +  Q+  +K ++IK    ++ QLEE    L  ++ E
Sbjct: 45  SLTVKNQQLEDEIEKLEAGLSDSKQTEQDNVEKENQIKSLTVKNHQLEEEIEKLEAELAE 104

Query: 363 CKRLIXEFDRVLXDEEXRNTSKVNKQL 443
            K+L  +   +  + +  N SK N+QL
Sbjct: 105 SKQLSEDSHHLQSNND--NFSKKNQQL 129

>YQO2_CAEEL (Q09529) Hypothetical protein EEED8.2|
          Length = 299

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
 Frame = +3

Query: 210 DVPMSPELEQID--GEIQDIFRALQNGFQKIDKI-----KDSXRQSKQLEELTGKMRECK 368
           D P SPELE++    ++QD  ++L+   + +  +     KD+    K LE++     E  
Sbjct: 25  DAPKSPELEEVSTVSDLQDELKSLRLENKDLYSLMEQLKKDNDEMKKSLEKVMKNQAE-- 82

Query: 369 RLIXEFDRVLXDEEXRNTSKVNKQLI 446
             + E + +   E+ + + K+  +L+
Sbjct: 83  --LGELEEIRAIEDDKRSEKLATELV 106

>K2C1B_RAT (Q6IG01) Keratin, type II cytoskeletal 1b (Type II keratin Kb39)|
          Length = 519

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
 Frame = +3

Query: 189 AAAMAASDVPMSPELEQIDGEIQDIF----RALQNGFQKIDKIKDSXRQSKQLEELTGKM 356
           A  + A    +  ++EQ+ G I D      RALQ+  QK+ + +++ +Q K  E+L   +
Sbjct: 392 AQRLQAEIANIKKQIEQMHGSISDAEERGERALQDAKQKLQETEEALQQMK--EDLARLL 449

Query: 357 RECKRL----------IXEFDRVLXDEEXRNTSKVNKQL 443
           R+ + L          I  +  +L  EE R +  +  Q+
Sbjct: 450 RDYQALLGAKLSLDVEIATYRELLEGEESRMSGALQSQV 488

>NAL12_HUMAN (P59046) NACHT-, LRR- and PYD-containing protein 12|
           (PYRIN-containing APAF1-like protein 7) (Monarch-1)
           (Regulated by nitric oxide)
          Length = 1061

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 318 RQSKQLEELTGKMRECKRLIXEFDRVLXDEEXRNTSKVNKQLID 449
           R+ + +E+   ++ EC  L   + R+L  +E  N  +V +QL+D
Sbjct: 135 RKFRLMEDRNARLGECVNLSHRYTRLLLVKEHSNPMQVQQQLLD 178

>MYH1_HUMAN (P12882) Myosin-1 (Myosin heavy chain, skeletal muscle, adult 1)|
            (Myosin heavy chain IIx/d) (MyHC-IIx/d)
          Length = 1939

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1734 LETDISQIQGEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQT 1793

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1794 VKDLQHR 1800

>NOS1_HUMAN (P29475) Nitric-oxide synthase, brain (EC 1.14.13.39) (NOS type I)|
           (Neuronal NOS) (N-NOS) (nNOS) (Constitutive NOS)
           (NC-NOS) (bNOS)
          Length = 1434

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
 Frame = +3

Query: 144 PHAXGRIPLGVGGDPAAAMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQ 323
           PHA G  P   G DPA       +    E  ++  EI+ +   L +G + +     +  +
Sbjct: 173 PHANGLAPRPPGQDPAKKATRVSLQGRGENNELLKEIEPVLSLLTSGSRGVKGGAPAKAE 232

Query: 324 SKQL-----EELTGKMRECKRLIXEFDRVLXD 404
            K +      +L GK  +   L  E DRV  D
Sbjct: 233 MKDMGIQVDRDLDGKSHKPLPLGVENDRVFND 264

>MYSS_RABIT (P02562) Myosin heavy chain, skeletal muscle (Fragments)|
          Length = 1084

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 879  LETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 938

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 939  VKDLQQR 945

>MYH4_RABIT (Q28641) Myosin-4 (Myosin heavy chain, skeletal muscle, juvenile)|
          Length = 1938

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1733 LETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1792

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1793 VKDLQHR 1799

>MYH4_MOUSE (Q5SX39) Myosin-4 (Myosin heavy chain, skeletal muscle, fetal)|
          Length = 1939

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1734 LETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1793

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1794 VKDLQHR 1800

>MYH4_HUMAN (Q9Y623) Myosin-4 (Myosin heavy chain, skeletal muscle, fetal)|
            (Myosin heavy chain IIb) (MyHC-IIb)
          Length = 1939

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1734 LETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1793

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1794 VKDLQLR 1800

>MYH1_MOUSE (Q5SX40) Myosin-1 (Myosin heavy chain, skeletal muscle, adult 1)|
          Length = 1942

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ QI GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1737 LETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQT 1796

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1797 VKDLQHR 1803

>TRI43_HUMAN (Q96BQ3) Tripartite motif protein 43|
          Length = 446

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = +3

Query: 231 LEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKMRE-CKRLIXEFDRVLXDE 407
           LE+++ E Q+IF+ LQ  + K+D      ++SK L+E+  ++ E C +   E  + L D 
Sbjct: 198 LERLNKEYQEIFQQLQRSWVKMD------QKSKHLKEMYQELMEMCHKPDVELLQDLGDI 251

Query: 408 EXRNTS 425
             R+ S
Sbjct: 252 VARSES 257

>CCD11_HUMAN (Q96M91) Coiled-coil domain-containing protein 11|
          Length = 399

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
 Frame = +3

Query: 219 MSPELEQIDGEIQD--------IFRALQNGFQKIDKIK----DSXRQSKQLEELTGKMRE 362
           +   +E I  E +D        + RALQ+  ++ DK K    D  R+ K   +   + RE
Sbjct: 177 LQERIEHIQQEYRDEQDLNMKLVQRALQDLQEEADKKKQKREDMIREQKIYHKYLAQRRE 236

Query: 363 CKRLIX-EFDRVLXDEEXRNTSKVNKQL 443
            ++    EFDR+L +++ +  ++ +K+L
Sbjct: 237 EEKAQEKEFDRILEEDKAKKLAEKDKEL 264

>RAD50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase|
          Length = 879

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
 Frame = +3

Query: 219 MSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQS--------------KQLEELTGKM 356
           +S E++ ++ +++++ R        I+K+K+  ++               K++EEL GK+
Sbjct: 671 LSMEIKGLETKLEELERRRDEIKSTIEKLKEERKERESAKMELEKLNIAIKRIEELRGKI 730

Query: 357 RECKRLIXE 383
           +E K LI E
Sbjct: 731 KEYKALIKE 739

>HSLU_SHIFL (P0A6H7) ATP-dependent hsl protease ATP-binding subunit hslU (Heat|
           shock protein hslU)
          Length = 443

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 183 DPAAAMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKM 356
           D AAA    ++   P +E++  ++Q +F+ L    QK  K+K        +EE   K+
Sbjct: 176 DLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKL 233

>HSLU_ECOLI (P0A6H5) ATP-dependent hsl protease ATP-binding subunit hslU (Heat|
           shock protein hslU)
          Length = 443

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 183 DPAAAMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKM 356
           D AAA    ++   P +E++  ++Q +F+ L    QK  K+K        +EE   K+
Sbjct: 176 DLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKL 233

>HSLU_ECOL6 (Q8FBC0) ATP-dependent hsl protease ATP-binding subunit hslU|
          Length = 443

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 183 DPAAAMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKM 356
           D AAA    ++   P +E++  ++Q +F+ L    QK  K+K        +EE   K+
Sbjct: 176 DLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKL 233

>HSLU_ECO57 (P0A6H6) ATP-dependent hsl protease ATP-binding subunit hslU (Heat|
           shock protein hslU)
          Length = 443

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 183 DPAAAMAASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKM 356
           D AAA    ++   P +E++  ++Q +F+ L    QK  K+K        +EE   K+
Sbjct: 176 DLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKL 233

>LTBP2_MOUSE (O08999) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1813

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 144 PHAXGRIPLGVGGDPAAAMAASDVPMSPELEQI 242
           PH   R+P    G PA ++    +P SP  EQ+
Sbjct: 789 PHLPARVPGDATGRPAPSLPGQGIPESPAEEQV 821

>MYH2_HUMAN (Q9UKX2) Myosin heavy chain, skeletal muscle, adult 2 (Myosin heavy|
            chain IIa) (MyHC-IIa)
          Length = 1941

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 219  MSPELEQIDGEIQDIFRALQNGFQKIDK-IKDSXRQSKQLEELTGKMRECKRLIXEFDRV 395
            +  ++ Q+ GE++DI +  +N  +K  K I D+   +++L++        +R+    ++ 
Sbjct: 1736 LETDISQMQGEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1795

Query: 396  LXDEEXR 416
            + D + R
Sbjct: 1796 VKDLQLR 1802

>Y1344_SULAC (Q4J946) Putative HTH-type transcriptional regulatory protein|
           Saci_1344
          Length = 305

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 297 DKIKDSXRQSKQLEELTGKMRECKRLIXEFDRVLXDEEXRNTSKVNKQLID 449
           D IKD    +K+ +EL     E  +++ + DRVL D   + T K N   ID
Sbjct: 182 DIIKDYDSNTKKKKELQSDYNEEVKILEKLDRVLSDANYK-TVKFNFTAID 231

>F10A1_MOUSE (Q99L47) Hsc70-interacting protein (Hip) (Protein ST13 homolog)|
           (Protein FAM10A1)
          Length = 371

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/75 (24%), Positives = 37/75 (49%)
 Frame = +3

Query: 201 AASDVPMSPELEQIDGEIQDIFRALQNGFQKIDKIKDSXRQSKQLEELTGKMRECKRLIX 380
           AA D+ ++ +L+  D +   + R +Q   QKI + +    + ++  E+  ++   K+   
Sbjct: 200 AAHDLALACKLDY-DEDASAMLREVQPRAQKIAEHRRKYERKREEREIKERIERVKKARE 258

Query: 381 EFDRVLXDEEXRNTS 425
           E +R   +EE R  S
Sbjct: 259 EHERAQREEEARRQS 273

>ELL2_HUMAN (O00472) RNA polymerase II elongation factor ELL2|
          Length = 640

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 249 EIQDIFRALQNGFQKIDKIKDSXRQSK-QLEELTGKMRECKRLIXEFDR 392
           E Q++   +   +QKI +   +  + K + E L  K+   KRLI EFD+
Sbjct: 585 EYQNVHEEVLQEYQKIKQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQ 633


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,184,350
Number of Sequences: 219361
Number of extensions: 509309
Number of successful extensions: 2143
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)