ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06c01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K3 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1326 Score = 391 bits (197), Expect = e-105 Identities = 302/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 39 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 98 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 99 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 158 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 159 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 218 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 219 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 278 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 ||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 279 tcttcccccttgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 338 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 |||||||||||||||||||||||||||| |||||||| Sbjct: 339 ggagggcgttcggcgcggcggaggaggagttcctgca 375
>gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1526 Score = 391 bits (197), Expect = e-105 Identities = 302/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 38 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 97 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 98 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 157 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 158 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 217 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 218 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 277 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 ||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 278 tcttcccccttgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 337 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 |||||||||||||||||||||||||||| |||||||| Sbjct: 338 ggagggcgttcggcgcggcggaggaggagttcctgca 374
>ref|XM_469858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 391 bits (197), Expect = e-105 Identities = 302/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 109 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 168 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 169 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 228 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 229 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 288 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 289 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 348 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 |||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 349 tcttcccccatgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 408 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 | |||||||||||||||||||||||||| |||||||| Sbjct: 409 gtagggcgttcggcgcggcggaggaggagttcctgca 445
>dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099H11, full insert sequence Length = 1532 Score = 391 bits (197), Expect = e-105 Identities = 302/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 60 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 119 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 120 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 179 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 180 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 239 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 240 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 299 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 |||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 300 tcttcccccatgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 359 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 | |||||||||||||||||||||||||| |||||||| Sbjct: 360 gtagggcgttcggcgcggcggaggaggagttcctgca 396
>dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050O18, full insert sequence Length = 1776 Score = 391 bits (197), Expect = e-105 Identities = 302/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 182 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 183 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 242 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 243 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 302 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 303 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 362 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 |||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 363 tcttcccccatgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 422 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 | |||||||||||||||||||||||||| |||||||| Sbjct: 423 gtagggcgttcggcgcggcggaggaggagttcctgca 459
>dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D12, full insert sequence Length = 1635 Score = 383 bits (193), Expect = e-103 Identities = 301/337 (89%) Strand = Plus / Plus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 164 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 223 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || Sbjct: 224 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcga 283 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 284 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 343 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 344 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 403 Query: 368 tcttcccccacgtccaacgcttcgcccaggagcaggggggcgtgaccgcggaggcgatcc 427 |||||||||| |||||||| |||| ||||||| ||||| ||| | |||||| ||||| Sbjct: 404 tcttcccccatgtccaacgattcgagaaggagcaaggggggatgagcacggaggtgatcc 463 Query: 428 ggagggcgttcggcgcggcggaggaggacttcctgca 464 | |||||||||||||||||||||||||| |||||||| Sbjct: 464 gtagggcgttcggcgcggcggaggaggagttcctgca 500
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 331 bits (167), Expect = 1e-87 Identities = 236/259 (91%) Strand = Plus / Minus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31170726 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 31170667 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 31170666 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 31170607 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 31170606 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 31170547 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 31170546 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 31170487 Query: 368 tcttcccccacgtccaacg 386 |||||||||| |||||||| Sbjct: 31170486 tcttcccccatgtccaacg 31170468 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| ||| Sbjct: 5594304 tggaggaccaggcgcaggtgttcgtctccccggcggcgacgctcgtcggcgtgtacgacg 5594363 Query: 326 gacacggcggccccga 341 | |||||||||||||| Sbjct: 5594364 gccacggcggccccga 5594379 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 395 aggagcaggggggcgtgaccgcggaggcgatccggagggcgttcggcgcggcggaggagg 454 ||||||| ||||| ||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 31170376 aggagcaaggggggatgagcacggaggtgatccgtagggcgttcggcgcggcggaggagg 31170317 Query: 455 acttcctgca 464 | |||||||| Sbjct: 31170316 agttcctgca 31170307 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 acggacacggcggccccgacgcctcccgcttc 354 |||| |||| ||||||||||||| |||||||| Sbjct: 34657486 acggccacgccggccccgacgccgcccgcttc 34657517 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggcgcggcggcggcggacgg 188 |||||||||||||||||||| Sbjct: 7682825 ggcgcggcggcggcggacgg 7682844
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 331 bits (167), Expect = 1e-87 Identities = 236/259 (91%) Strand = Plus / Minus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 91367 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 91308 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 91307 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 91248 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 91247 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 91188 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 91187 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 91128 Query: 368 tcttcccccacgtccaacg 386 |||||||||| |||||||| Sbjct: 91127 tcttcccccatgtccaacg 91109 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 395 aggagcaggggggcgtgaccgcggaggcgatccggagggcgttcggcgcggcggaggagg 454 ||||||| ||||| ||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 91017 aggagcaaggggggatgagcacggaggtgatccgtagggcgttcggcgcggcggaggagg 90958 Query: 455 acttcctgca 464 | |||||||| Sbjct: 90957 agttcctgca 90948
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 331 bits (167), Expect = 1e-87 Identities = 236/259 (91%) Strand = Plus / Minus Query: 128 tgttgagggccgttgcgaggtgctgcgggcactggccgccgggcgcggcggcggcggacg 187 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 31261249 tgttgagggcggtggcgaggtgctgcgggcactggccgccgggggcggcggcggcggacg 31261190 Query: 188 gcatgctctggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccg 247 | ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||| || | Sbjct: 31261189 ggatgctgtggcagacggagctgaggccgcacgcggcgggggagttctcgatggcggcgg 31261130 Query: 248 cgcaggccaacctcgtcatggaggaccaggcgcaggtgctcgcctccccggctgccacgc 307 ||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 31261129 cgcaggcgaacctggccatggaggaccaggcgcaggtgctcgcctcccccgccgccacgc 31261070 Query: 308 tcgtcggcgtataccacggacacggcggccccgacgcctcccgcttcctccgctccgccc 367 |||||||||| || |||| ||||||||| |||||||||||||||||||||||||| || Sbjct: 31261069 tcgtcggcgtgtatgacgggcacggcggcgccgacgcctcccgcttcctccgctcccgcc 31261010 Query: 368 tcttcccccacgtccaacg 386 |||||||||| |||||||| Sbjct: 31261009 tcttcccccatgtccaacg 31260991 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| ||| Sbjct: 5593519 tggaggaccaggcgcaggtgttcgtctccccggcggcgacgctcgtcggcgtgtacgacg 5593578 Query: 326 gacacggcggccccga 341 | |||||||||||||| Sbjct: 5593579 gccacggcggccccga 5593594 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 395 aggagcaggggggcgtgaccgcggaggcgatccggagggcgttcggcgcggcggaggagg 454 ||||||| ||||| ||| | |||||| |||||| ||||||||||||||||||||||||| Sbjct: 31260899 aggagcaaggggggatgagcacggaggtgatccgtagggcgttcggcgcggcggaggagg 31260840 Query: 455 acttcctgca 464 | |||||||| Sbjct: 31260839 agttcctgca 31260830 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 acggacacggcggccccgacgcctcccgcttc 354 |||| |||| ||||||||||||| |||||||| Sbjct: 34747558 acggccacgccggccccgacgccgcccgcttc 34747589 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggcgcggcggcggcggacgg 188 |||||||||||||||||||| Sbjct: 7680660 ggcgcggcggcggcggacgg 7680679
>ref|XM_476412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 137 bits (69), Expect = 4e-29 Identities = 146/169 (86%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 196 tggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccgcgcaggcc 255 |||||| |||||||| | ||||||| |||||||||||||||||||| || ||||||||| Sbjct: 221 tggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggcc 280 Query: 256 aacctcgtcatggaggaccaggcgcaggtgctcgcctc-cccggctgccacgctcgtcgg 314 ||| || |||||||||||||||||||| | || || |||||| |||||||||||||| Sbjct: 281 aacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggc-gccacgctcgtcgg 339 Query: 315 cgtataccacggacacggcggccccgacgcctcccgcttcctccgctcc 363 ||| || | || || ||||||||||||||||||||||||||||||||| Sbjct: 340 cgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcc 388
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 137 bits (69), Expect = 4e-29 Identities = 146/169 (86%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 196 tggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccgcgcaggcc 255 |||||| |||||||| | ||||||| |||||||||||||||||||| || ||||||||| Sbjct: 780731 tggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggcc 780672 Query: 256 aacctcgtcatggaggaccaggcgcaggtgctcgcctc-cccggctgccacgctcgtcgg 314 ||| || |||||||||||||||||||| | || || |||||| |||||||||||||| Sbjct: 780671 aacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggc-gccacgctcgtcgg 780613 Query: 315 cgtataccacggacacggcggccccgacgcctcccgcttcctccgctcc 363 ||| || | || || ||||||||||||||||||||||||||||||||| Sbjct: 780612 cgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcc 780564 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 264 catggaggaccaggcgcaggtgctcgcctcc 294 ||||||||||||| ||||||||||||||||| Sbjct: 15358920 catggaggaccag-cgcaggtgctcgcctcc 15358891
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 137 bits (69), Expect = 4e-29 Identities = 146/169 (86%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 196 tggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccgcgcaggcc 255 |||||| |||||||| | ||||||| |||||||||||||||||||| || ||||||||| Sbjct: 100538 tggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggcc 100479 Query: 256 aacctcgtcatggaggaccaggcgcaggtgctcgcctc-cccggctgccacgctcgtcgg 314 ||| || |||||||||||||||||||| | || || |||||| |||||||||||||| Sbjct: 100478 aacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggc-gccacgctcgtcgg 100420 Query: 315 cgtataccacggacacggcggccccgacgcctcccgcttcctccgctcc 363 ||| || | || || ||||||||||||||||||||||||||||||||| Sbjct: 100419 cgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcc 100371
>dbj|AK102668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101O03, full insert sequence Length = 1461 Score = 137 bits (69), Expect = 4e-29 Identities = 146/169 (86%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 196 tggcagacggagctgcggccgcacgccgcgggggagttctccatggccgccgcgcaggcc 255 |||||| |||||||| | ||||||| |||||||||||||||||||| || ||||||||| Sbjct: 221 tggcaggcggagctgacggcgcacgcggcgggggagttctccatggcggcggcgcaggcc 280 Query: 256 aacctcgtcatggaggaccaggcgcaggtgctcgcctc-cccggctgccacgctcgtcgg 314 ||| || |||||||||||||||||||| | || || |||||| |||||||||||||| Sbjct: 281 aacgcggtgatggaggaccaggcgcaggtcatggcgtcgcccggc-gccacgctcgtcgg 339 Query: 315 cgtataccacggacacggcggccccgacgcctcccgcttcctccgctcc 363 ||| || | || || ||||||||||||||||||||||||||||||||| Sbjct: 340 cgtctatgatggccatggcggccccgacgcctcccgcttcctccgctcc 388
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| ||| Sbjct: 137836 tggaggaccaggcgcaggtgttcgtctccccggcggcgacgctcgtcggcgtgtacgacg 137895 Query: 326 gacacggcggccccga 341 | |||||||||||||| Sbjct: 137896 gccacggcggccccga 137911
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| ||| Sbjct: 58003 tggaggaccaggcgcaggtgttcgtctccccggcggcgacgctcgtcggcgtgtacgacg 58062 Query: 326 gacacggcggccccga 341 | |||||||||||||| Sbjct: 58063 gccacggcggccccga 58078
>dbj|AK072292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016C20, full insert sequence Length = 1695 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||||||||||| ||| ||||||||| || |||||||||||||| ||| ||| Sbjct: 292 tggaggaccaggcgcaggtgttcgtctccccggcggcgacgctcgtcggcgtgtacgacg 351 Query: 326 gacacggcggccccga 341 | |||||||||||||| Sbjct: 352 gccacggcggccccga 367
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 153 cgggcactggccgccgggcgcggcggcggcggacggcatgctctggcagacggagctgcg 212 |||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | Sbjct: 25555795 cgggcactggccgccgggggcggcggcggcggacgggatgctttggtagacggagctgag 25555736 Query: 213 gccgcacgccgcgggggagttct 235 ||| |||| |||||||| |||| Sbjct: 25555735 gccacacgtggcgggggatttct 25555713
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 153 cgggcactggccgccgggcgcggcggcggcggacggcatgctctggcagacggagctgcg 212 |||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | Sbjct: 2601 cgggcactggccgccgggggcggcggcggcggacgggatgctttggtagacggagctgag 2542 Query: 213 gccgcacgccgcgggggagttct 235 ||| |||| |||||||| |||| Sbjct: 2541 gccacacgtggcgggggatttct 2519
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 153 cgggcactggccgccgggcgcggcggcggcggacggcatgctctggcagacggagctgcg 212 |||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||| | Sbjct: 83398 cgggcactggccgccgggggcggcggcggcggacgggatgctttggtagacggagctgag 83339 Query: 213 gccgcacgccgcgggggagttct 235 ||| |||| |||||||| |||| Sbjct: 83338 gccacacgtggcgggggatttct 83316
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||| ||||||| | |||| ||||| || || |||||||||| ||| ||| Sbjct: 24100175 tggaggaccaggggcaggtggtgacctcgccggcggcgaccttcgtcggcgtctacgacg 24100234 Query: 326 gacacggcggccccgacgcctcccgcttcctccgctccgccctcttcccccacgtcca 383 | ||||| |||||||| || ||||||||| || |||| ||||||||||||| |||| Sbjct: 24100235 gccacggtggccccgaggcgtcccgcttcatctcctcccgcctcttcccccacctcca 24100292 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 25084626 cgccgggcgcggcggcggcg 25084645 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 ggacggcatgctctggcagacggagctgcggccgca 218 |||||||||||| || |||| |||||||||||||| Sbjct: 13803627 ggacggcatgctacggtagacagagctgcggccgca 13803662 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gccgccgggcgcggcggcgg 181 |||||||||||||||||||| Sbjct: 10210970 gccgccgggcgcggcggcgg 10210951
>dbj|AK071206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088E06, full insert sequence Length = 1744 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||| ||||||| | |||| ||||| || || |||||||||| ||| ||| Sbjct: 257 tggaggaccaggggcaggtggtgacctcgccggcggcgaccttcgtcggcgtctacgacg 316 Query: 326 gacacggcggccccgacgcctcccgcttcctccgctccgccctcttcccccacgtcca 383 | ||||| |||||||| || ||||||||| || |||| ||||||||||||| |||| Sbjct: 317 gccacggtggccccgaggcgtcccgcttcatctcctcccgcctcttcccccacctcca 374
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||| ||||||| | |||| ||||| || || |||||||||| ||| ||| Sbjct: 24028381 tggaggaccaggggcaggtggtgacctcgccggcggcgaccttcgtcggcgtctacgacg 24028440 Query: 326 gacacggcggccccgacgcctcccgcttcctccgctccgccctcttcccccacgtcca 383 | ||||| |||||||| || ||||||||| || |||| ||||||||||||| |||| Sbjct: 24028441 gccacggtggccccgaggcgtcccgcttcatctcctcccgcctcttcccccacctcca 24028498 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 ggacggcatgctctggcagacggagctgcggccgca 218 |||||||||||| || |||| |||||||||||||| Sbjct: 13757907 ggacggcatgctacggtagacagagctgcggccgca 13757942 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gccgccgggcgcggcggcgg 181 |||||||||||||||||||| Sbjct: 10210852 gccgccgggcgcggcggcgg 10210833
>emb|AL772418.4|CNS08C9W Oryza sativa chromosome 12, . Partial sequence from BAC OJ1473_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 32463 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 266 tggaggaccaggcgcaggtgctcgcctccccggctgccacgctcgtcggcgtataccacg 325 |||||||||||| ||||||| | |||| ||||| || || |||||||||| ||| ||| Sbjct: 15249 tggaggaccaggggcaggtggtgacctcgccggcggcgaccttcgtcggcgtctacgacg 15308 Query: 326 gacacggcggccccgacgcctcccgcttcctccgctccgccctcttcccccacgtcca 383 | ||||| |||||||| || ||||||||| || |||| ||||||||||||| |||| Sbjct: 15309 gccacggtggccccgaggcgtcccgcttcatctcctcccgcctcttcccccacctcca 15366
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 331 ggcggccccgacgcctcccgcttcctccgctccgccctcttccc 374 ||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 6024878 ggcggccccgacgcctcccgctttcttcgctcccgcctcttccc 6024835
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 331 ggcggccccgacgcctcccgcttcctccgctccgccctcttccc 374 ||||||||||||||||||||||| || |||||| ||||||||| Sbjct: 45717 ggcggccccgacgcctcccgctttcttcgctcccgcctcttccc 45674
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 264 catggaggaccaggcgcaggtgctcgcctcc 294 ||||||||||||| ||||||||||||||||| Sbjct: 65919 catggaggaccag-cgcaggtgctcgcctcc 65890
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 162 gccgccgggcgcggcggcggcgg 184 ||||||||||||||||||||||| Sbjct: 928362 gccgccgggcgcggcggcggcgg 928340
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 gctgcgggcactggccgccggg 170 |||||||||||||||||||||| Sbjct: 34192 gctgcgggcactggccgccggg 34213
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cgggcgcggcggcggcggacgg 188 |||||||||||||||||||||| Sbjct: 163575 cgggcgcggcggcggcggacgg 163596
>gb|BT018965.1| Zea mays clone Contig356.F mRNA sequence Length = 1614 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 226 ggggagttctccatggccgccgcgcaggccaacc 259 ||||||||||||||||||| | ||||||||||| Sbjct: 178 ggggagttctccatggccgtggtgcaggccaacc 211
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cgggcgcggcggcggcggacgg 188 |||||||||||||||||||||| Sbjct: 26271 cgggcgcggcggcggcggacgg 26292
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence Length = 112592 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 226 ggggagttctccatggccgccgcgcaggccaacc 259 ||||||||||||||||||| | ||||||||||| Sbjct: 55282 ggggagttctccatggccgtggtgcaggccaacc 55249
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 ctccatggccgccgcgcaggcc 255 |||||||||||||||||||||| Sbjct: 3824728 ctccatggccgccgcgcaggcc 3824707
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cgggcgcggcggcggcggacgg 188 |||||||||||||||||||||| Sbjct: 25922043 cgggcgcggcggcggcggacgg 25922064
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 ctggccgccgggcgcggcggcg 180 |||||||||||||||||||||| Sbjct: 171932 ctggccgccgggcgcggcggcg 171953 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcgg 184 ||||||||||||||||||||| Sbjct: 4945337 cgccgggcgcggcggcggcgg 4945317 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 3318524 cgccgggcgcggcggcggcg 3318543 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tcggcgcggcggaggaggac 456 |||||||||||||||||||| Sbjct: 996690 tcggcgcggcggaggaggac 996709
>gb|AY106533.1| Zea mays PCO124223 mRNA sequence Length = 2059 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 226 ggggagttctccatggccgccgcgcaggccaacc 259 ||||||||||||||||||| | ||||||||||| Sbjct: 575 ggggagttctccatggccgtggtgcaggccaacc 608
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ctggccgccgggcgcggcggc 179 ||||||||||||||||||||| Sbjct: 222732 ctggccgccgggcgcggcggc 222712
>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence Length = 157884 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggcgcggcggcggcggacggc 189 ||||||||||||||||||||| Sbjct: 865 ggcgcggcggcggcggacggc 885
>emb|CR974431.11| Pig DNA sequence from clone CH242-511J12 on chromosome 17, complete sequence Length = 207434 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 aggtgctgcgggcactggccg 165 ||||||||||||||||||||| Sbjct: 76181 aggtgctgcgggcactggccg 76161
>gb|M25956.1|AH003140S01 Gallus gallus alpha-2 type I collagen (COLA) gene, exons 1 through 4 Length = 4923 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcgg 184 ||||||||||||||||||||| Sbjct: 1064 cgccgggcgcggcggcggcgg 1044
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 tccatggccgccgcgcaggcc 255 ||||||||||||||||||||| Sbjct: 3119459 tccatggccgccgcgcaggcc 3119479
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 tccatggccgccgcgcaggcc 255 ||||||||||||||||||||| Sbjct: 299339 tccatggccgccgcgcaggcc 299359
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 acgaggtccgccaggcctggc 484 ||||||||||||||||||||| Sbjct: 957360 acgaggtccgccaggcctggc 957340
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcgg 184 ||||||||||||||||||||| Sbjct: 4421035 cgccgggcgcggcggcggcgg 4421055
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcgg 184 ||||||||||||||||||||| Sbjct: 15765 cgccgggcgcggcggcggcgg 15785
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcgg 184 ||||||||||||||||||||| Sbjct: 68716 cgccgggcgcggcggcggcgg 68736
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcgg 181 ||||||||||||||||||||| Sbjct: 28379 ggccgccgggcgcggcggcgg 28359
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 acgaggtccgccaggcctggc 484 ||||||||||||||||||||| Sbjct: 988621 acgaggtccgccaggcctggc 988601
>ref|XM_482570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 784 gccgggcgcggcggcggcgg 803
>ref|XM_470163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1480 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 acggacacggcggccccgacgcctcccgcttc 354 |||| |||| ||||||||||||| |||||||| Sbjct: 281 acggccacgccggccccgacgccgcccgcttc 312
>gb|DQ217291.1| Taeniopygia guttata clone 0065P0012D02 mRNA sequence Length = 460 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 14 gccgggcgcggcggcggcgg 33
>gb|DQ217288.1| Taeniopygia guttata clone 0065P0012E01 mRNA sequence Length = 505 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 46 gccgggcgcggcggcggcgg 65
>gb|DQ216937.1| Taeniopygia guttata clone 0064P0007F08 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 460 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 8 gccgggcgcggcggcggcgg 27
>gb|DQ216936.1| Taeniopygia guttata clone 0058P0010F06 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 469 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 23 gccgggcgcggcggcggcgg 42
>gb|DQ216935.1| Taeniopygia guttata clone 0061P0002E12 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 479 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 33 gccgggcgcggcggcggcgg 52
>gb|DQ216934.1| Taeniopygia guttata clone 0064P0002A05 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 466 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 14 gccgggcgcggcggcggcgg 33
>gb|DQ216932.1| Taeniopygia guttata clone 0058P0014H09 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 453 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 8 gccgggcgcggcggcggcgg 27
>gb|DQ216929.1| Taeniopygia guttata clone 0061P0021G01 F1F0-type ATP synthase subunit g-like mRNA, complete sequence Length = 494 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 41 gccgggcgcggcggcggcgg 60
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 1382181 gcgcggcggcggcggacggc 1382162
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 80664 gccgggcgcggcggcggcgg 80645
>gb|AY658736.1| Synthetic construct Peudomonas aeruginosa clone FLH034797.01F PA4788 gene, partial cds Length = 858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 770 gcgcggcggcggcggacggc 789
>ref|NM_203369.1| Rattus norvegicus zinc finger, MYND domain containing 11 (Zmynd11), transcript variant 3, mRNA Length = 3971 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 30 gccgggcgcggcggcggcgg 49
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ggccgccgggcgcggcggcg 180 |||||||||||||||||||| Sbjct: 339766 ggccgccgggcgcggcggcg 339785
>ref|XM_838350.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1267) partial mRNA Length = 1644 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 1448 gcgcggcggcggcggacggc 1467
>ref|XM_540798.2| PREDICTED: Canis familiaris similar to SH3 and multiple ankyrin repeat domains 2 isoform 1 (LOC483677), mRNA Length = 5817 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 4380 gccgggcgcggcggcggcgg 4361
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcggacgg 188 ||||||||| |||||||||||||| Sbjct: 77401 gccgggcgccgcggcggcggacgg 77378
>gb|BC065308.1| Rattus norvegicus zinc finger, MYND domain containing 11, transcript variant 3, mRNA (cDNA clone MGC:72621 IMAGE:5599817), complete cds Length = 3971 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 30 gccgggcgcggcggcggcgg 49
>gb|AC109247.14| Mus musculus chromosome 9, clone RP23-462C14, complete sequence Length = 225020 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 cttcattccttctcagagag 44 |||||||||||||||||||| Sbjct: 115210 cttcattccttctcagagag 115191
>gb|AY151368.1| Oryza grandiglumis clone 1 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AY151367.1| Oryza grandiglumis clone 5 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AY151365.1| Oryza grandiglumis clone 3 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AY151364.1| Oryza grandiglumis clone 2 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence Length = 596 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AY151363.1| Oryza grandiglumis clone 1 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>emb|AL713922.12| Human DNA sequence from clone RP11-631M21 on chromosome 10 Contains a novel gene, the gene for a novel protein similar to beta-tubulin 4Q (TUBB4Q) (LOC253936), the interleukin 9 receptor (IL9R) pseudogene (IL9RP2), the 5' end of the gene for adenovirus 5 E1A binding protein (BS69), a novel pseudogene (FLJ40100) and four CpG islands, complete sequence Length = 164405 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 121456 gccgggcgcggcggcggcgg 121475
>emb|AL390034.23| Human DNA sequence from clone RP11-375G3 on chromosome 10 Contains the 3' end of the VDAC2 gene for voltage-dependent anion channel 2, the gene for a novel protein (FLJ23841) and a CpG island, complete sequence Length = 38679 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gagtagcaaaaaggggaggg 92 |||||||||||||||||||| Sbjct: 12882 gagtagcaaaaaggggaggg 12863
>emb|AL158207.15| Human DNA sequence from clone RP11-409K20 on chromosome 9 Contains the TOR1B gene for torsin family 1 member B (torsin B) (DQ1), the DYT1 gene for dystonia 1, torsion (autosomal dominant; torsin A) (DQ2, TOR1A), the gene for hepatocellular carcinoma-associated antigen 59 (HSPC220, LOC51759), the USP20 gene for ubiquitin specific protease 20 (KIAA1003), the 3' end of the FNBP1 gene for formin-binding protein 17 (FBP17), two novel genes, a 60S ribosomal protein L34 (RPL34) pseudogene and four CpG islands, complete sequence Length = 169963 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ccaggcctggcccagcgccc 493 |||||||||||||||||||| Sbjct: 76030 ccaggcctggcccagcgccc 76011
>emb|AL034423.21|HS1185N5 Human DNA sequence from clone RP5-1185N5 on chromosome 20q13.11-13.2 Contains the UBE2V1 gene for ubiquitin-conjugating enzyme E2 variant 1 and two CpG islands, complete sequence Length = 113589 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 111828 cgccgggcgcggcggcggcg 111847
>gb|AF520781.1| Oryza grandiglumis isolate 105669 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF520780.1| Oryza grandiglumis isolate 105664 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF514917.1| Oryza alta clone 39 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF514916.1| Oryza alta clone 34 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF514914.1| Oryza alta clone 33 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF514913.1| Oryza alta clone 28 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF514911.1| Oryza alta clone 26 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513606.1| Oryza alta strain IRRI 100161 clone 9 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513605.1| Oryza alta strain IRRI 100161 clone 3 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513604.1| Oryza alta strain IRRI 100161 clone 6 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513603.1| Oryza alta strain IRRI 100161 clone 7 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513602.1| Oryza alta strain IRRI 100161 clone 4 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 598 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AF513601.1| Oryza alta strain IRRI 100161 clone 5 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 597 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 acggacacggcggccccgacgcctcccgcttc 354 |||| |||| ||||||||||||| |||||||| Sbjct: 115203 acggccacgccggccccgacgccgcccgcttc 115234
>emb|Y17457.1|HOSA17457 Homo sapiens LSFR3A gene, first to fifth of eight identified exons Length = 3057 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ccaggcctggcccagcgccc 493 |||||||||||||||||||| Sbjct: 542 ccaggcctggcccagcgccc 523
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcggacgg 188 ||||||||| |||||||||||||| Sbjct: 143246 gccgggcgccgcggcggcggacgg 143269
>ref|NM_001031423.1| Gallus gallus similar to C9orf77 protein (LOC427252), mRNA Length = 2461 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 214 cgccgggcgcggcggcggcg 195
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 3578004 gcgcggcggcggcggacggc 3577985
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 ggccgccgggcgcggcggcggcgg 184 ||||| |||||||||||||||||| Sbjct: 101172 ggccggcgggcgcggcggcggcgg 101195
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcggcgg 184 ||||| |||||||||||||||||| Sbjct: 136595 ggccggcgggcgcggcggcggcgg 136572
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcggcgg 184 ||||| |||||||||||||||||| Sbjct: 107703 ggccggcgggcgcggcggcggcgg 107680
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggcgcggcggcggcggacgg 188 |||||||||||||||||||| Sbjct: 86456 ggcgcggcggcggcggacgg 86475
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgcggcggcggcggacggca 190 |||||||||||||||||||| Sbjct: 94664 cgcggcggcggcggacggca 94645
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcggcggacggca 190 |||||||||||||||||||| Sbjct: 87628 cgcggcggcggcggacggca 87647 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcggcggacggca 190 |||||||||||||||||||| Sbjct: 44231 cgcggcggcggcggacggca 44250 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgcggcggcggcggacggca 190 |||||||||||||||||||| Sbjct: 30110 cgcggcggcggcggacggca 30129
>emb|AJ001206.2|TSO001206 Streptomyces coelicolor A3(2), glycogen metabolism cluster II Length = 9184 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgcggcggcggcggacgg 188 |||||||||||||||||||| Sbjct: 5756 ggcgcggcggcggcggacgg 5737
>emb|AJ720633.1| Gallus gallus mRNA for hypothetical protein, clone 22d6 Length = 2461 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 214 cgccgggcgcggcggcggcg 195
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 ggcgcggcggcggcggacgg 188 |||||||||||||||||||| Sbjct: 32465 ggcgcggcggcggcggacgg 32446
>gb|AE012257.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 165 of 460 of the complete genome Length = 13121 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 catggccgccgcgcaggcca 256 |||||||||||||||||||| Sbjct: 3604 catggccgccgcgcaggcca 3585
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcggcggcggacggcatgc 193 |||||||||||||||||||| Sbjct: 1297350 ggcggcggcggacggcatgc 1297369
>gb|AC010973.6| Homo sapiens BAC clone RP11-148K1 from 7, complete sequence Length = 222605 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 37857 gccgggcgcggcggcggcgg 37876
>gb|DQ314862.1| Streptomyces hygroscopicus strain NRRL 2388 hygromycin A biosynthetic gene cluster, complete sequence Length = 39151 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 tggccgccgcgcaggccaacctcg 262 ||||||||||||||||| |||||| Sbjct: 31281 tggccgccgcgcaggccgacctcg 31304
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ggccgccgggcgcggcggcg 180 |||||||||||||||||||| Sbjct: 1019839 ggccgccgggcgcggcggcg 1019858
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 catggccgccgcgcaggcca 256 |||||||||||||||||||| Sbjct: 3215839 catggccgccgcgcaggcca 3215858
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggccgccgcgcaggccaacc 259 |||||||||||||||||||| Sbjct: 1518635 ggccgccgcgcaggccaacc 1518654
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 2428567 gccgggcgcggcggcggcgg 2428548
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 21150208 gccgggcgcggcggcggcgg 21150227
>gb|AE004892.1| Pseudomonas aeruginosa PAO1, section 453 of 529 of the complete genome Length = 10964 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 5929 gcgcggcggcggcggacggc 5948
>gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186321 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 111687 gccgggcgcggcggcggcgg 111706
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcggcgg 184 ||||| |||||||||||||||||| Sbjct: 3776483 ggccggcgggcgcggcggcggcgg 3776460
>gb|BC091489.1| Homo sapiens zinc finger, MYND domain containing 11, mRNA (cDNA clone MGC:111056 IMAGE:6186814), complete cds Length = 3914 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 33 gccgggcgcggcggcggcgg 52
>emb|AL935071.4|CNS08CCN Oryza sativa chromosome 12, . BAC OSJNBb0016C24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 87778 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 ggacggcatgctctggcagacggagctgcggccgca 218 |||||||||||| || |||| |||||||||||||| Sbjct: 66934 ggacggcatgctacggtagacagagctgcggccgca 66969
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcg 183 |||||||||||||||||||| Sbjct: 46853 cgccgggcgcggcggcggcg 46834
>emb|AL713910.2|CNS07YQB Oryza sativa chromosome 12, . BAC OSJNBa0042B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145118 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 ggacggcatgctctggcagacggagctgcggccgca 218 |||||||||||| || |||| |||||||||||||| Sbjct: 137228 ggacggcatgctacggtagacagagctgcggccgca 137263
>gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the complete genome Length = 10881 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcg 180 |||||||||||||||||||| Sbjct: 8213 ggccgccgggcgcggcggcg 8194
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 121418 gccgggcgcggcggcggcgg 121437
>dbj|AB113568.1| Actinoplanes sp. A40644 mevalonate pathway genes and BE-40644 biosynthetic genes, complete cds Length = 22478 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcg 180 |||||||||||||||||||| Sbjct: 13234 ggccgccgggcgcggcggcg 13215
>dbj|AK120748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004O05, full insert sequence Length = 1606 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 323 acggacacggcggccccgacgcctcccgcttc 354 |||| |||| ||||||||||||| |||||||| Sbjct: 407 acggccacgccggccccgacgccgcccgcttc 438
>ref|XM_317558.2| Anopheles gambiae str. PEST ENSANGP00000007226 (ENSANGG00000005443), partial mRNA Length = 15369 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 307 ctcgtcggcgtataccacggacacggcggccccgac 342 ||||||||||| |||||||||||||| ||| |||| Sbjct: 1107 ctcgtcggcgtccaccacggacacggccgccacgac 1072
>dbj|AK109655.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F01, full insert sequence Length = 928 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gccgccgggcgcggcggcgg 181 |||||||||||||||||||| Sbjct: 487 gccgccgggcgcggcggcgg 506
>gb|AF017682.1|AF017682 Oryza alta internal transcribed spacer 1, complete sequence Length = 205 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 81 gccgggcgcggcggcggcgg 62
>gb|AY168488.1| Cyclopes didactylus acetylcholinergic receptor M4 (acm4) gene, partial cds Length = 519 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 161 ggccgccgggcgcggcggcggcgg 184 |||||||||||||||||| ||||| Sbjct: 216 ggccgccgggcgcggcgggggcgg 193
>dbj|AB075926.1| Pseudomonas aeruginosa phaJ3 gene for (R)-specific enoyl-CoA hydratase, complet cds Length = 858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gcgcggcggcggcggacggc 189 |||||||||||||||||||| Sbjct: 770 gcgcggcggcggcggacggc 789
>gb|AF052745.1|AF052745 Oerskovia xanthineolytica beta-1,3-glucanase II (bglII) gene, complete cds Length = 1627 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 cgccgggcgcggcggcggcggacg 187 ||||||||||||||||||| |||| Sbjct: 355 cgccgggcgcggcggcggccgacg 332
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccgggcgcggcggcggcgg 184 |||||||||||||||||||| Sbjct: 2436303 gccgggcgcggcggcggcgg 2436284
>emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa0094N04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92382 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gccgccgggcgcggcggcgg 181 |||||||||||||||||||| Sbjct: 75172 gccgccgggcgcggcggcgg 75153
>emb|BX664709.2|CNS09SBZ Oryza sativa chromosome 12, . BAC B1270G11 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155451 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 ggacggcatgctctggcagacggagctgcggccgca 218 |||||||||||| || |||| |||||||||||||| Sbjct: 119286 ggacggcatgctacggtagacagagctgcggccgca 119321
>gb|M62615.1|HS525KD Human cytomegalovirus 25 kD protein gene, complete cds Length = 2164 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 gccgggcgcggcggcggcggacgg 188 ||||||||| |||||||||||||| Sbjct: 253 gccgggcgccgcggcggcggacgg 276 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,816,168 Number of Sequences: 3902068 Number of extensions: 3816168 Number of successful extensions: 129766 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 123174 Number of HSP's gapped (non-prelim): 6592 length of query: 500 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 478 effective length of database: 17,147,199,772 effective search space: 8196361491016 effective search space used: 8196361491016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
