Clone Name | bart06b12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 161 bits (81), Expect = 3e-36 Identities = 136/155 (87%) Strand = Plus / Minus Query: 340 tgctcgaactcctcctcgccgcggncttcgggcaggagctccttctcttcgcgcaccgac 399 ||||||| ||| |||||||||| | |||| |||||||||||| |||||||| ||||| Sbjct: 7230572 tgctcgacctcgtcctcgccgccgcgttcgcgcaggagctcctgctcttcgcccaccgca 7230513 Query: 400 gcccgtccaccgccgccggcatcgagaaccgctacttcgacctcttcctcgtccccgtca 459 | || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 7230512 ggccctccaccgccgccgggatcgagaaccggtacttcgacctcttcctcgtccccgtcg 7230453 Query: 460 ccgtctgcctcggngccaccctgctcgccgcgcac 494 |||||||||||| ||||| || |||||||||||| Sbjct: 7230452 ccgtctgcctcgtcgccacgctactcgccgcgcac 7230418 Score = 40.1 bits (20), Expect = 6.7 Identities = 50/60 (83%) Strand = Plus / Minus Query: 56 catgccgggcctcctcgcctactcgggcgccgggctgggcctcctggccctggcggcgct 115 ||||||||||||||||| || || | | ||| |||||||||||||| || |||||||| Sbjct: 7230883 catgccgggcctcctcgagtattccgcgggcggcctgggcctcctggcgctcgcggcgct 7230824 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 acctcgcgctgcccacgctg 260 |||||||||||||||||||| Sbjct: 1257231 acctcgcgctgcccacgctg 1257212
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 161 bits (81), Expect = 3e-36 Identities = 136/155 (87%) Strand = Plus / Minus Query: 340 tgctcgaactcctcctcgccgcggncttcgggcaggagctccttctcttcgcgcaccgac 399 ||||||| ||| |||||||||| | |||| |||||||||||| |||||||| ||||| Sbjct: 107983 tgctcgacctcgtcctcgccgccgcgttcgcgcaggagctcctgctcttcgcccaccgca 107924 Query: 400 gcccgtccaccgccgccggcatcgagaaccgctacttcgacctcttcctcgtccccgtca 459 | || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 107923 ggccctccaccgccgccgggatcgagaaccggtacttcgacctcttcctcgtccccgtcg 107864 Query: 460 ccgtctgcctcggngccaccctgctcgccgcgcac 494 |||||||||||| ||||| || |||||||||||| Sbjct: 107863 ccgtctgcctcgtcgccacgctactcgccgcgcac 107829 Score = 40.1 bits (20), Expect = 6.7 Identities = 50/60 (83%) Strand = Plus / Minus Query: 56 catgccgggcctcctcgcctactcgggcgccgggctgggcctcctggccctggcggcgct 115 ||||||||||||||||| || || | | ||| |||||||||||||| || |||||||| Sbjct: 108294 catgccgggcctcctcgagtattccgcgggcggcctgggcctcctggcgctcgcggcgct 108235
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 161 bits (81), Expect = 3e-36 Identities = 136/155 (87%) Strand = Plus / Minus Query: 340 tgctcgaactcctcctcgccgcggncttcgggcaggagctccttctcttcgcgcaccgac 399 ||||||| ||| |||||||||| | |||| |||||||||||| |||||||| ||||| Sbjct: 65576 tgctcgacctcgtcctcgccgccgcgttcgcgcaggagctcctgctcttcgcccaccgca 65517 Query: 400 gcccgtccaccgccgccggcatcgagaaccgctacttcgacctcttcctcgtccccgtca 459 | || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 65516 ggccctccaccgccgccgggatcgagaaccggtacttcgacctcttcctcgtccccgtcg 65457 Query: 460 ccgtctgcctcggngccaccctgctcgccgcgcac 494 |||||||||||| ||||| || |||||||||||| Sbjct: 65456 ccgtctgcctcgtcgccacgctactcgccgcgcac 65422 Score = 40.1 bits (20), Expect = 6.7 Identities = 50/60 (83%) Strand = Plus / Minus Query: 56 catgccgggcctcctcgcctactcgggcgccgggctgggcctcctggccctggcggcgct 115 ||||||||||||||||| || || | | ||| |||||||||||||| || |||||||| Sbjct: 65887 catgccgggcctcctcgagtattccgcgggcggcctgggcctcctggcgctcgcggcgct 65828
>dbj|AK106064.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G08, full insert sequence Length = 1431 Score = 161 bits (81), Expect = 3e-36 Identities = 136/155 (87%) Strand = Plus / Plus Query: 340 tgctcgaactcctcctcgccgcggncttcgggcaggagctccttctcttcgcgcaccgac 399 ||||||| ||| |||||||||| | |||| |||||||||||| |||||||| ||||| Sbjct: 529 tgctcgacctcgtcctcgccgccgcgttcgcgcaggagctcctgctcttcgcccaccgca 588 Query: 400 gcccgtccaccgccgccggcatcgagaaccgctacttcgacctcttcctcgtccccgtca 459 | || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 589 ggccctccaccgccgccgggatcgagaaccggtacttcgacctcttcctcgtccccgtcg 648 Query: 460 ccgtctgcctcggngccaccctgctcgccgcgcac 494 |||||||||||| ||||| || |||||||||||| Sbjct: 649 ccgtctgcctcgtcgccacgctactcgccgcgcac 683 Score = 40.1 bits (20), Expect = 6.7 Identities = 50/60 (83%) Strand = Plus / Plus Query: 56 catgccgggcctcctcgcctactcgggcgccgggctgggcctcctggccctggcggcgct 115 ||||||||||||||||| || || | | ||| |||||||||||||| || |||||||| Sbjct: 218 catgccgggcctcctcgagtattccgcgggcggcctgggcctcctggcgctcgcggcgct 277
>gb|AY116507.1| Hypocrea jecorina D-xylose reductase (xyl1) gene, complete cds Length = 2733 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 431 ctacttcgacctcttcctcgtcc 453 ||||||||||||||||||||||| Sbjct: 1466 ctacttcgacctcttcctcgtcc 1488
>emb|CR732284.1|CNS0GRZ5 Tetraodon nigroviridis full-length cDNA Length = 1339 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 302 gccgggctgggcctcctggcc 322
>emb|CR730983.2|CNS0GQZ0 Tetraodon nigroviridis full-length cDNA Length = 1311 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 285 gccgggctgggcctcctggcc 305
>emb|CR725541.2|CNS0GMRV Tetraodon nigroviridis full-length cDNA Length = 1355 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 308 gccgggctgggcctcctggcc 328
>emb|CR724566.2|CNS0GM0S Tetraodon nigroviridis full-length cDNA Length = 1358 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 306 gccgggctgggcctcctggcc 326
>emb|CR724989.1|CNS0GMCJ Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 292 gccgggctgggcctcctggcc 312
>emb|CR723529.2|CNS0GL7Z Tetraodon nigroviridis full-length cDNA Length = 1358 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 308 gccgggctgggcctcctggcc 328
>emb|CR723319.2|CNS0GL25 Tetraodon nigroviridis full-length cDNA Length = 1349 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gccgggctgggcctcctggcc 104 ||||||||||||||||||||| Sbjct: 307 gccgggctgggcctcctggcc 327
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 407 caccgccgccggcatcgagaaccgc 431 ||||||||||||||||||| ||||| Sbjct: 4124590 caccgccgccggcatcgagcaccgc 4124566 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tcctggccctggcggcgctgg 117 ||||||||||||||||||||| Sbjct: 120331 tcctggccctggcggcgctgg 120311
>gb|AF331854.1|AF331854 Zea mays cultivar B 73 UDP-glucosyltransferase BX8 (Bx8) gene, complete cds Length = 6322 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cctctcggcgctgctctccgc 235 ||||||||||||||||||||| Sbjct: 3330 cctctcggcgctgctctccgc 3350
>gb|AY109649.1| Zea mays CL122_1 mRNA sequence Length = 3177 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 gctgcccacgctggccgcctccgcgctct 276 |||||||||||||| ||||| |||||||| Sbjct: 2650 gctgcccacgctggacgcctgcgcgctct 2678
>gb|AY618555.1| Cystoisospora cf. ohioensis 18S ribosomal RNA gene, partial sequence Length = 1793 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 294 gatccatcgccggccgaagc 275
>gb|AY279205.1| Cystoisospora timoni 18S ribosomal RNA gene, partial sequence Length = 1792 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 294 gatccatcgccggccgaagc 275
>ref|XM_481009.1| Oryza sativa (japonica cultivar-group), mRNA Length = 495 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 285 cctcctcgcctcctcgggcgccgg 262
>ref|XM_474426.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1242 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ctggccctggcggcgctgga 118 |||||||||||||||||||| Sbjct: 886 ctggccctggcggcgctgga 905
>ref|NM_195011.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015J03.21), mRNA Length = 666 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 465 cctcctcgcctcctcgggcgccgg 442 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 425 cctcctcgcctcctcgggcgccgg 402
>ref|XM_467508.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1033 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ctcgaactcctcctcgccgc 361 |||||||||||||||||||| Sbjct: 405 ctcgaactcctcctcgccgc 386
>gb|AY485502.1| Navicula sp. Nav.30 18S ribosomal RNA gene, partial sequence Length = 1726 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 269 gatccatcgccggccgaagc 250
>gb|AY485460.1| Navicula sp. Nav.I 18S ribosomal RNA gene, partial sequence Length = 1693 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 231 gatccatcgccggccgaagc 212
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gggctgggcctcctggccct 106 |||||||||||||||||||| Sbjct: 1113792 gggctgggcctcctggccct 1113811
>gb|L76471.1|ISRRGE Isospora felis 18S ribosomal RNA gene, partial sequence Length = 1755 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 277 gatccatcgccggccgaagc 258
>gb|DQ060683.1| Isospora belli isolate IBF3 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060682.1| Isospora belli isolate IBF2 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060681.1| Isospora belli isolate IBF1 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060680.1| Isospora belli isolate IB36 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060679.1| Isospora belli isolate IB35 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060678.1| Isospora belli isolate IB34 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060677.1| Isospora belli isolate IB32 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060676.1| Isospora belli isolate IB29 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060675.1| Isospora belli isolate IB25 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060674.1| Isospora belli isolate IB24 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060673.1| Isospora belli isolate IB21 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060672.1| Isospora belli isolate IB19 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060671.1| Isospora belli isolate IB18 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060670.1| Isospora belli isolate IB17 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060669.1| Isospora belli isolate IB16 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060668.1| Isospora belli isolate IB15 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060667.1| Isospora belli isolate IB14 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060666.1| Isospora belli isolate IB410 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060665.1| Isospora belli isolate IB7 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060664.1| Isospora belli isolate IB6 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060663.1| Isospora belli isolate IB5 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060662.1| Isospora belli isolate IB4 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060661.1| Isospora belli isolate IB3 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060660.1| Isospora belli isolate IB2 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060659.1| Isospora belli isolate IB1 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>gb|DQ060658.1| Isospora belli isolate IB12 18S ribosomal RNA gene, partial sequence Length = 1680 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 288 gatccatcgccggccgaagc 269
>ref|XM_745754.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g09580) partial mRNA Length = 1149 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 cctcctggccctggcggcgctgga 118 ||||||||||||||||| |||||| Sbjct: 135 cctcctggccctggcggggctgga 158
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cgtccaccgccgccggcatc 422 |||||||||||||||||||| Sbjct: 170490 cgtccaccgccgccggcatc 170509
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cctggccctggcggcgctgg 117 |||||||||||||||||||| Sbjct: 236998 cctggccctggcggcgctgg 236979
>gb|DQ108472.1| Corchorus olitorius SSR marker J-67-M13F genomic sequence Length = 749 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 86 cgggctgggcctcctggccctggcggcgctgg 117 |||||||| ||| |||| |||||||||||||| Sbjct: 327 cgggctggtcctgctggtcctggcggcgctgg 358
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 ccccgtcaccgtctgcctcg 471 |||||||||||||||||||| Sbjct: 115085 ccccgtcaccgtctgcctcg 115066
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggccctggcggcgctgga 118 |||||||||||||||||||| Sbjct: 26775 ctggccctggcggcgctgga 26756
>emb|AJ251793.1|BBR251793 Bordetella bronchiseptica bupI gene, bupR gene and bfrZ gene Length = 5909 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cgtccaccgccgccggcatc 422 |||||||||||||||||||| Sbjct: 177 cgtccaccgccgccggcatc 196
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 132122 cctcctcgcctcctcgggcgccgg 132145 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 132082 cctcctcgcctcctcgggcgccgg 132105
>gb|AE005797.1| Caulobacter crescentus CB15 section 123 of 359 of the complete genome Length = 13360 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 cctggccctggcggcgctgg 117 |||||||||||||||||||| Sbjct: 3741 cctggccctggcggcgctgg 3722
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ctgggcctcctggccctggc 109 |||||||||||||||||||| Sbjct: 2549689 ctgggcctcctggccctggc 2549670
>gb|AF298623.1|AF298623 Hyaloklossia lieberkuehni 18S small subunit ribosomal RNA gene, partial sequence Length = 1564 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 245 gatccatcgccggccgaagc 226
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 157207 cctcctcgcctcctcgggcgccgg 157184 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 157167 cctcctcgcctcctcgggcgccgg 157144
>gb|AF106935.1|AF106935 Isospora belli small subunit ribosomal RNA gene, complete sequence Length = 1784 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 294 gatccatcgccggccgaagc 275
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 392 gcaccgacgcccgtccaccgccgccggc 419 |||||||||||| ||| ||||||||||| Sbjct: 330937 gcaccgacgcccttcccccgccgccggc 330964
>gb|AF029303.1|AF029303 Isospora ohioensis 18S ribosomal RNA gene, partial sequence Length = 1392 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 295 gatccatcgccggccgaagc 276
>gb|U97523.1|ISU97523 Isospora suis 18S ribosomal RNA gene, complete sequence Length = 1822 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 296 gatccatcgccggccgaagc 277
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 accgccgccggcatcgagaa 427 |||||||||||||||||||| Sbjct: 2365114 accgccgccggcatcgagaa 2365133
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggccctggcggcgctgga 118 |||||||||||||||||||| Sbjct: 35090272 ctggccctggcggcgctgga 35090253
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 4160378 cctcctcgcctcctcgggcgccgg 4160355 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 4160338 cctcctcgcctcctcgggcgccgg 4160315
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 agaaccgctacttcgacctcttcc 447 |||||||| ||||||||||||||| Sbjct: 26986411 agaaccgcaacttcgacctcttcc 26986388 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 9206479 cctcctcgcctcctcgggcgccgg 9206502
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcgaactcctcctcgccgc 361 |||||||||||||||||||| Sbjct: 29894721 ctcgaactcctcctcgccgc 29894740
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 17692 cctcctcgcctcctcgggcgccgg 17715
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 agaaccgctacttcgacctcttcc 447 |||||||| ||||||||||||||| Sbjct: 87811 agaaccgcaacttcgacctcttcc 87788
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 acctcgcgctgcccacgctg 260 |||||||||||||||||||| Sbjct: 109184 acctcgcgctgcccacgctg 109165
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcgaactcctcctcgccgc 361 |||||||||||||||||||| Sbjct: 51686 ctcgaactcctcctcgccgc 51705
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 141973 cctcctcgcctcctcgggcgccgg 141996
>ref|XM_320613.1| Anopheles gambiae str. PEST ENSANGP00000022858 (ENSANGG00000021334), partial mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 agctgctcgaactcctcctcgccg 360 |||||||||||||||| ||||||| Sbjct: 113 agctgctcgaactcctgctcgccg 90
>dbj|AK108418.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H10, full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ctggccctggcggcgctgga 118 |||||||||||||||||||| Sbjct: 1029 ctggccctggcggcgctgga 1048
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcctggccctggcggcgc 114 |||||||||||||||||||| Sbjct: 3458077 cctcctggccctggcggcgc 3458096
>dbj|AK063724.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-D09, full insert sequence Length = 1033 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ctcgaactcctcctcgccgc 361 |||||||||||||||||||| Sbjct: 405 ctcgaactcctcctcgccgc 386
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggccctggcggcgctgga 118 |||||||||||||||||||| Sbjct: 45367 ctggccctggcggcgctgga 45348
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 4161199 cctcctcgcctcctcgggcgccgg 4161176 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 cctcctcgcctactcgggcgccgg 88 ||||||||||| |||||||||||| Sbjct: 4161159 cctcctcgcctcctcgggcgccgg 4161136
>gb|U94787.1|U94787 Isospora belli small subunit ribosomal RNA gene, complete sequence Length = 1784 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 gatccatcgccggccgaagc 45 |||||||||||||||||||| Sbjct: 294 gatccatcgccggccgaagc 275
>gb|M96551.1|STMOXIARA Streptomyces antibioticus oxidoreductase and AraC-like transcription regulator, complete cds Length = 2624 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 ccgggctgggcctcctggccctgg 108 ||||||||| |||||||||||||| Sbjct: 498 ccgggctggtcctcctggccctgg 521 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,492,169 Number of Sequences: 3902068 Number of extensions: 2492169 Number of successful extensions: 54624 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53479 Number of HSP's gapped (non-prelim): 1141 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)