ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 155 bits (78), Expect = 2e-34 Identities = 171/202 (84%) Strand = Plus / Plus Query: 150 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 209 |||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| | Sbjct: 63190 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 63249 Query: 210 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 269 ||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| |||| Sbjct: 63250 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 63309 Query: 270 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 329 |||||||||||| |||||||| | ||||| |||||||||| || ||| | | || | Sbjct: 63310 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 63369 Query: 330 acctgatggccgcgctgtccct 351 |||||||||||||||||||||| Sbjct: 63370 acctgatggccgcgctgtccct 63391 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 118888 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 118947 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 118948 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 119007 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 119008 atcaagctgggcatccccaccgccatccaccgcctcggcgg 119048 Score = 129 bits (65), Expect = 9e-27 Identities = 113/129 (87%) Strand = Plus / Minus Query: 184 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 243 |||||| |||| ||| || || ||||| ||||| ||||||||||||||||||||||||| Sbjct: 131519 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 131460 Query: 244 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 303 |||| |||||||||| ||||||||||||||| |||||| ||||| || | ||||||||| Sbjct: 131459 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 131400 Query: 304 cctcggcgg 312 ||||||||| Sbjct: 131399 cctcggcgg 131391
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 2e-34 Identities = 171/202 (84%) Strand = Plus / Minus Query: 150 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 209 |||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| | Sbjct: 11550598 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 11550539 Query: 210 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 269 ||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| |||| Sbjct: 11550538 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 11550479 Query: 270 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 329 |||||||||||| |||||||| | ||||| |||||||||| || ||| | | || | Sbjct: 11550478 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 11550419 Query: 330 acctgatggccgcgctgtccct 351 |||||||||||||||||||||| Sbjct: 11550418 acctgatggccgcgctgtccct 11550397 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Minus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 11494900 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 11494841 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 11494840 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 11494781 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 11494780 atcaagctgggcatccccaccgccatccaccgcctcggcgg 11494740 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 151 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 210 ||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| || Sbjct: 7139047 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 7138988 Query: 211 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 270 |||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| ||||| Sbjct: 7138987 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 7138928 Query: 271 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || | |||||| ||||| || |||||||||||||||||||| Sbjct: 7138927 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 7138886 Score = 129 bits (65), Expect = 9e-27 Identities = 113/129 (87%) Strand = Plus / Plus Query: 184 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 243 |||||| |||| ||| || || ||||| ||||| ||||||||||||||||||||||||| Sbjct: 11482269 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 11482328 Query: 244 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 303 |||| |||||||||| ||||||||||||||| |||||| ||||| || | ||||||||| Sbjct: 11482329 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 11482388 Query: 304 cctcggcgg 312 ||||||||| Sbjct: 11482389 cctcggcgg 11482397 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 11303032 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11302973 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgac 331 ||| | |||| ||||| || ||||||||||||| |||||| || ||||||||||||||| Sbjct: 11302972 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11302913 Query: 332 ctgatggccgcgctgtccct 351 || | ||||||||||||| Sbjct: 11302912 ctcgtcaccgcgctgtccct 11302893 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 11331655 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11331596 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || ||| |||||||||| |||||| ||||| || |||||||||||| || || | Sbjct: 11331595 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11331536 Query: 317 gcctcgctgcccgacctgatggccgcgctgtccct 351 ||||||||||||||||| | ||||| |||||||| Sbjct: 11331535 gcctcgctgcccgaccttgtcgccgccctgtccct 11331501 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 11355303 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11355244 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || | | |||||||||| |||||| ||||| || |||||||||||| |||||| | Sbjct: 11355243 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11355184 Query: 317 gcctcgctgcccgacct 333 ||||||||||||||||| Sbjct: 11355183 gcctcgctgcccgacct 11355167 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 244 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 11439601 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 11439554 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 284 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 343 ||||| || |||||||||||| |||||| || || ||||||||||||||| | |||| Sbjct: 11439514 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 11439455 Query: 344 ctgtccct 351 |||||||| Sbjct: 11439454 ctgtccct 11439447 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 448 ctaccgcctcacaccgttgtcccgcatcct 477 |||||||||||| ||| ||||||||||||| Sbjct: 7138747 ctaccgcctcaccccgctgtcccgcatcct 7138718
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 2e-34 Identities = 171/202 (84%) Strand = Plus / Minus Query: 150 gagcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcagg 209 |||||||||| |||||| | |||||||| ||||||| | || || |||||| |||| | Sbjct: 11629787 gagcaatggcagctcagactcagaccatccaggttcctaacgatgccgagctgatgcaag 11629728 Query: 210 cacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcg 269 ||||||| |||||||||||||||||||||||||||||| | ||||||| |||||| |||| Sbjct: 11629727 cacaggccgacctgtggcgccacagcctctactacctcacgtccatgggcctccgctgcg 11629668 Query: 270 ccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccg 329 |||||||||||| |||||||| | ||||| |||||||||| || ||| | | || | Sbjct: 11629667 ccgtcgagctcggcatcccgaccacgatccatggcctcggcggcgccgccaccgtccctg 11629608 Query: 330 acctgatggccgcgctgtccct 351 |||||||||||||||||||||| Sbjct: 11629607 acctgatggccgcgctgtccct 11629586 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Minus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 11574089 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 11574030 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 11574029 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 11573970 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 11573969 atcaagctgggcatccccaccgccatccaccgcctcggcgg 11573929 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 151 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 210 ||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| || Sbjct: 7205018 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 7204959 Query: 211 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 270 |||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| ||||| Sbjct: 7204958 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 7204899 Query: 271 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || | |||||| ||||| || |||||||||||||||||||| Sbjct: 7204898 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 7204857 Score = 129 bits (65), Expect = 9e-27 Identities = 113/129 (87%) Strand = Plus / Plus Query: 184 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 243 |||||| |||| ||| || || ||||| ||||| ||||||||||||||||||||||||| Sbjct: 11561458 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 11561517 Query: 244 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 303 |||| |||||||||| ||||||||||||||| |||||| ||||| || | ||||||||| Sbjct: 11561518 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 11561577 Query: 304 cctcggcgg 312 ||||||||| Sbjct: 11561578 cctcggcgg 11561586 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 11382221 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11382162 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgac 331 ||| | |||| ||||| || ||||||||||||| |||||| || ||||||||||||||| Sbjct: 11382161 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11382102 Query: 332 ctgatggccgcgctgtccct 351 || | ||||||||||||| Sbjct: 11382101 ctcgtcaccgcgctgtccct 11382082 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 11410844 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 11410785 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || ||| |||||||||| |||||| ||||| || |||||||||||| || || | Sbjct: 11410784 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 11410725 Query: 317 gcctcgctgcccgacctgatggccgcgctgtccct 351 ||||||||||||||||| | ||||| |||||||| Sbjct: 11410724 gcctcgctgcccgaccttgtcgccgccctgtccct 11410690 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 11434492 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 11434433 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || | | |||||||||| |||||| ||||| || |||||||||||| |||||| | Sbjct: 11434432 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 11434373 Query: 317 gcctcgctgcccgacct 333 ||||||||||||||||| Sbjct: 11434372 gcctcgctgcccgacct 11434356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 244 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 11518790 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 11518743 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 284 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 343 ||||| || |||||||||||| |||||| || || ||||||||||||||| | |||| Sbjct: 11518703 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 11518644 Query: 344 ctgtccct 351 |||||||| Sbjct: 11518643 ctgtccct 11518636 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 448 ctaccgcctcacaccgttgtcccgcatcct 477 |||||||||||| ||| ||||||||||||| Sbjct: 7204718 ctaccgcctcaccccgctgtcccgcatcct 7204689
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 147 bits (74), Expect = 4e-32 Identities = 146/170 (85%) Strand = Plus / Plus Query: 182 gttcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctac 241 |||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 60 gttcccacggacgccgagctgctgcaggcgcaggccgacctgtggcgccacagcctctac 119 Query: 242 tacctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccac 301 ||||| | |||||||| ||| |||||| || |||||| | |||||||| ||||||||| Sbjct: 120 tacctgacatccatggcgctcaagtgcgcggtggagctccacatcccgaccgccatccac 179 Query: 302 cgcctcggcggggcggcctcgctgcccgacctgatggccgcgctgtccct 351 ||| |||||| | ||| ||||||| ||||| |||||||||||||||| Sbjct: 180 aacctaggcgggtctgccacgctgccggacctcgtggccgcgctgtccct 229
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 4637 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 4696 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 4697 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 4756 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 4757 atcaagctgggcatccccaccgccatccaccgcctcggcgg 4797 Score = 129 bits (65), Expect = 9e-27 Identities = 113/129 (87%) Strand = Plus / Minus Query: 184 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 243 |||||| |||| ||| || || ||||| ||||| ||||||||||||||||||||||||| Sbjct: 17268 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 17209 Query: 244 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 303 |||| |||||||||| ||||||||||||||| |||||| ||||| || | ||||||||| Sbjct: 17208 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 17149 Query: 304 cctcggcgg 312 ||||||||| Sbjct: 17148 cctcggcgg 17140 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactac 244 ||||||||||| |||||||| || || |||||||||||||||| |||| Sbjct: 59936 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctac 59983 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 284 atcccgactgccatccaccgcctcggcggggcggcctcgctgcccgacctgatggccgcg 343 ||||| || |||||||||||| |||||| || || ||||||||||||||| | |||| Sbjct: 60023 atccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgct 60082 Query: 344 ctgtccct 351 |||||||| Sbjct: 60083 ctgtccct 60090
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 48 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 107 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 108 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 167 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 168 atcaagctgggcatccccaccgccatccaccgcctcggcgg 208
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 145 bits (73), Expect = 2e-31 Identities = 139/161 (86%) Strand = Plus / Plus Query: 152 gcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggca 211 |||||||||| |||||| | || |||||||||||||| ||||||||||||||||| || Sbjct: 53 gcaatggcggatcaggctaacacaatagaggttcccactgacgctgagctgctgcaagcg 112 Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||||||||||||||||| |||||| || ||||| |||||| Sbjct: 113 caggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgcgcc 172 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || |||| | ||||| || |||||||||||||||||||| Sbjct: 173 atcaagctgggcatccccaccgccatccaccgcctcggcgg 213
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Plus Query: 151 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 210 ||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| || Sbjct: 43508 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 43567 Query: 211 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 270 |||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| ||||| Sbjct: 43568 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 43627 Query: 271 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || | |||||| ||||| || |||||||||||||||||||| Sbjct: 43628 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 43669 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 448 ctaccgcctcacaccgttgtcccgcatcct 477 |||||||||||| ||| ||||||||||||| Sbjct: 43808 ctaccgcctcaccccgctgtcccgcatcct 43837
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 131 bits (66), Expect = 2e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 151 agcaatggcggctcaggcacagaccatagaggttcccacagacgctgagctgctgcaggc 210 ||||||||||| ||| || | || ||| |||||||||| ||||||||||||||||| || Sbjct: 52267 agcaatggcgggtcaagctaacacaatacaggttcccaccgacgctgagctgctgcaagc 52208 Query: 211 acaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgc 270 |||||| ||||| |||||||||||| ||| ||||||| | ||||||| ||||| ||||| Sbjct: 52207 acaggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgc 52148 Query: 271 cgtcgagctcgagatcccgactgccatccaccgcctcggcgg 312 || | |||||| ||||| || |||||||||||||||||||| Sbjct: 52147 cgccaagctcggcatccccaccgccatccaccgcctcggcgg 52106 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 448 ctaccgcctcacaccgttgtcccgcatcct 477 |||||||||||| ||| ||||||||||||| Sbjct: 51967 ctaccgcctcaccccgctgtcccgcatcct 51938
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 129 bits (65), Expect = 9e-27 Identities = 113/129 (87%) Strand = Plus / Plus Query: 184 tcccacagacgctgagctgctgcaggcacaggcagacctgtggcgccacagcctctacta 243 |||||| |||| ||| || || ||||| ||||| ||||||||||||||||||||||||| Sbjct: 96 tcccactgacgatgaactcctacaggcgcaggccaacctgtggcgccacagcctctacta 155 Query: 244 cctctcctccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccg 303 |||| |||||||||| ||||||||||||||| |||||| ||||| || | ||||||||| Sbjct: 156 cctcacctccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccg 215 Query: 304 cctcggcgg 312 ||||||||| Sbjct: 216 cctcggcgg 224
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 119 bits (60), Expect = 9e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 212 caggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgcgcc 271 ||||| || ||||||||||||| ||||| ||||||| |||||||| | |||||||||||| Sbjct: 89390 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 89331 Query: 272 gtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgcccgac 331 ||| | |||| ||||| || ||||||||||||| |||||| || ||||||||||||||| Sbjct: 89330 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 89271 Query: 332 ctgatggccgcgctgtccct 351 || | ||||||||||||| Sbjct: 89270 ctcgtcaccgcgctgtccct 89251 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 118013 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 117954 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || ||| |||||||||| |||||| ||||| || |||||||||||| || || | Sbjct: 117953 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 117894 Query: 317 gcctcgctgcccgacctgatggccgcgctgtccct 351 ||||||||||||||||| | ||||| |||||||| Sbjct: 117893 gcctcgctgcccgaccttgtcgccgccctgtccct 117859 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||| ||| ||||||||||||||||| | || | |||||| Sbjct: 141661 gagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccatg 141602 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || | | |||||||||| |||||| ||||| || |||||||||||| |||||| | Sbjct: 141601 gcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcacc 141542 Query: 317 gcctcgctgcccgacct 333 ||||||||||||||||| Sbjct: 141541 gcctcgctgcccgacct 141525
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 197 gagctgctgcaggcacaggcagacctgtggcgccacagcctctactacctctcctccatg 256 ||||||||||| || ||||| ||||||||||||||||||||||||| | || | |||||| Sbjct: 92 gagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatg 151 Query: 257 gccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcg 316 || ||| |||||||||| |||||| ||||| || |||||||||||| || || | Sbjct: 152 gcgttccagtgcgccgtcaagctcggcatccccaccgccatccaccgcgctggtggcacc 211 Query: 317 gcctcgctgcccgacctgatggccgcgctgtccct 351 ||||||||||||||||| | ||||| |||||||| Sbjct: 212 gcctcgctgcccgaccttgtcgccgccctgtccct 246
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 209 gcacaggcagacctgtggcgccacagcctctactacctctcctccatggccctccggtgc 268 |||||||| |||||||||||||||| ||| ||||||||| | ||||||| ||||| ||| Sbjct: 87 gcacaggccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgc 146 Query: 269 gccgtcgagctcgagatcccgactgccatccaccgcctcggcggggcggcctcgctgccc 328 |||||| |||||| |||||||| || |||||| |||||| || | ||||||||||| Sbjct: 147 gccgtcaagctcggcatcccgacggcgatccacaacctcggtggcgtctcctcgctgccc 206 Query: 329 gacctg 334 |||||| Sbjct: 207 gacctg 212
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcg 281 |||||| ||||||| |||||||||||||||| Sbjct: 91 tccatgtccctccgctgcgccgtcgagctcg 121
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcg 281 |||||| ||||||| |||||||||||||||| Sbjct: 31604086 tccatgtccctccgctgcgccgtcgagctcg 31604116
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcg 281 |||||| ||||||| |||||||||||||||| Sbjct: 17818 tccatgtccctccgctgcgccgtcgagctcg 17848
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcg 281 |||||| ||||||| |||||||||||||||| Sbjct: 117109 tccatgtccctccgctgcgccgtcgagctcg 117139
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||| ||| |||||||| |||||||| ||||| | ||||||||||||| |||| Sbjct: 9845411 tccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggc 9845352 Query: 311 gg 312 || Sbjct: 9845351 gg 9845350
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||| ||| |||||||| |||||||| ||||| | ||||||||||||| |||| Sbjct: 135653 tccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggc 135594 Query: 311 gg 312 || Sbjct: 135593 gg 135592
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Minus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||| ||| |||||||| |||||||| ||||| | ||||||||||||| |||| Sbjct: 42046 tccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcggc 41987 Query: 311 gg 312 || Sbjct: 41986 gg 41985
>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 tcatgcgcgtgctcgtcacatcagg 408 ||||||||||||||||| ||||||| Sbjct: 46812 tcatgcgcgtgctcgtcccatcagg 46788
>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 tcatgcgcgtgctcgtcacatcagg 408 ||||||||||||||||| ||||||| Sbjct: 46812 tcatgcgcgtgctcgtcccatcagg 46788
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 ggcggcctcgctgcccgacctgatg 337 ||||||||||||| ||||||||||| Sbjct: 122346 ggcggcctcgctggccgacctgatg 122370
>emb|CR524242.1| Gallus gallus finished cDNA, clone ChEST1013p17 Length = 1143 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 agaggagcaatggcggctcag 166 ||||||||||||||||||||| Sbjct: 648 agaggagcaatggcggctcag 628
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 gcgccgtcgagctcgagatcc 287 ||||||||||||||||||||| Sbjct: 150857 gcgccgtcgagctcgagatcc 150877
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcgccgtcgagctcgagatcc 287 ||||||||||||||||||||| Sbjct: 34354249 gcgccgtcgagctcgagatcc 34354229
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gcgccgtcgagctcgagatcc 287 ||||||||||||||||||||| Sbjct: 51896 gcgccgtcgagctcgagatcc 51876
>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence Length = 209182 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 gctgagctgctgcaggcacag 214 ||||||||||||||||||||| Sbjct: 30475 gctgagctgctgcaggcacag 30455
>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence Length = 221553 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gctgagctgctgcaggcacag 214 ||||||||||||||||||||| Sbjct: 21042 gctgagctgctgcaggcacag 21062
>ref|XM_480279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 6.4 Identities = 68/84 (80%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||||||| |||||| |||| |||| ||||| | |||||||||||| |||| Sbjct: 124 tccatggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggc 183 Query: 311 ggggcggcctcgctgcccgacctg 334 || | ||||| |||||||||||| Sbjct: 184 ggctctgcctccctgcccgacctg 207
>ref|XM_475739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gacgctgagctgctgcaggc 210 |||||||||||||||||||| Sbjct: 438 gacgctgagctgctgcaggc 419
>gb|AC166150.2| Mus musculus chromosome 1, clone RP23-321N22, complete sequence Length = 214765 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaccagaaagagaggagcaa 155 |||||||||||||||||||| Sbjct: 62833 gaccagaaagagaggagcaa 62852
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaccagaaagagaggagcaa 155 |||||||||||||||||||| Sbjct: 7503 gaccagaaagagaggagcaa 7484
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 ctccgccgggtcatgcgcgtgctc 397 ||||| |||||||||||||||||| Sbjct: 539758 ctccggcgggtcatgcgcgtgctc 539735
>gb|AC005538.3| Homo sapiens BAC clone RP11-332L11 from 2, complete sequence Length = 193627 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccacagacgctgagctgctg 205 |||||||||||||||||||| Sbjct: 163055 ccacagacgctgagctgctg 163036
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gacgctgagctgctgcaggc 210 |||||||||||||||||||| Sbjct: 2312 gacgctgagctgctgcaggc 2331
>gb|AC161346.7| Mus musculus chromosome 1, clone RP24-335G4, complete sequence Length = 191681 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gaccagaaagagaggagcaa 155 |||||||||||||||||||| Sbjct: 118467 gaccagaaagagaggagcaa 118448
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gacgctgagctgctgcaggc 210 |||||||||||||||||||| Sbjct: 68604 gacgctgagctgctgcaggc 68623
>gb|AC122521.4| Mus musculus BAC clone RP24-476C7 from chromosome 6, complete sequence Length = 142127 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 agctgctgcaggcacaggca 217 |||||||||||||||||||| Sbjct: 109001 agctgctgcaggcacaggca 109020
>emb|Z93241.11|HS222E13 Human DNA sequence from clone RP1-222E13 on chromosome 22, complete sequence Length = 123360 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 cgctgagctgctgcaggcacaggc 216 |||||||| ||||||||||||||| Sbjct: 111115 cgctgagcagctgcaggcacaggc 111092
>gb|AY341030.1| Homo sapiens diaphorase (NADH) (cytochrome b-5 reductase) (DIA1) gene, complete cds Length = 31836 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 cgctgagctgctgcaggcacaggc 216 |||||||| ||||||||||||||| Sbjct: 89 cgctgagcagctgcaggcacaggc 112
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 ctgcccgacctgatggccgcgctg 346 |||| ||||||||||||||||||| Sbjct: 3306935 ctgcgcgacctgatggccgcgctg 3306912
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 68/84 (80%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||||||| |||||| |||| |||| ||||| | |||||||||||| |||| Sbjct: 4046806 tccatggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggc 4046865 Query: 311 ggggcggcctcgctgcccgacctg 334 || | ||||| |||||||||||| Sbjct: 4046866 ggctctgcctccctgcccgacctg 4046889
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gacgctgagctgctgcaggc 210 |||||||||||||||||||| Sbjct: 26151264 gacgctgagctgctgcaggc 26151283
>gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chromosome unknown, complete sequence Length = 177940 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccacagacgctgagctgctg 205 |||||||||||||||||||| Sbjct: 76906 ccacagacgctgagctgctg 76925
>gb|AC012063.7| Homo sapiens BAC clone RP11-116F11 from 2, complete sequence Length = 125055 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cctatgtatcaacatttgcataga 55 ||||||| |||||||||||||||| Sbjct: 24024 cctatgtttcaacatttgcataga 24047
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggccctccggtgcgccgtcg 275 |||||||||||||||||||| Sbjct: 2144974 ggccctccggtgcgccgtcg 2144993
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 40.1 bits (20), Expect = 6.4 Identities = 68/84 (80%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||||||| |||||| |||| |||| ||||| | |||||||||||| |||| Sbjct: 134103 tccatggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggc 134162 Query: 311 ggggcggcctcgctgcccgacctg 334 || | ||||| |||||||||||| Sbjct: 134163 ggctctgcctccctgcccgacctg 134186
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 40.1 bits (20), Expect = 6.4 Identities = 68/84 (80%) Strand = Plus / Plus Query: 251 tccatggccctccggtgcgccgtcgagctcgagatcccgactgccatccaccgcctcggc 310 |||||||||||| |||||| |||| |||| ||||| | |||||||||||| |||| Sbjct: 39919 tccatggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggc 39978 Query: 311 ggggcggcctcgctgcccgacctg 334 || | ||||| |||||||||||| Sbjct: 39979 ggctctgcctccctgcccgacctg 40002
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 ccgacctgatggccgcgctg 346 |||||||||||||||||||| Sbjct: 1372681 ccgacctgatggccgcgctg 1372662
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gacgctgagctgctgcaggc 210 |||||||||||||||||||| Sbjct: 220244 gacgctgagctgctgcaggc 220225
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 caccgcctcggcggggcggc 318 |||||||||||||||||||| Sbjct: 4227959 caccgcctcggcggggcggc 4227940
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ctcggcggggcggcctcgct 324 |||||||||||||||||||| Sbjct: 2617890 ctcggcggggcggcctcgct 2617871
>gb|AF028835.1|AF028835 Drosophila pallidosa vermilion (v) gene, complete cds Length = 3626 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 cagcctctactacctctcct 251 |||||||||||||||||||| Sbjct: 989 cagcctctactacctctcct 970
>gb|AC004707.1|AC004707 Homo sapiens chromosome 17, clone hRPC.117_B_12, complete sequence Length = 123585 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 tgctgcaggcacaggcagac 220 |||||||||||||||||||| Sbjct: 20504 tgctgcaggcacaggcagac 20523 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,451,911 Number of Sequences: 3902068 Number of extensions: 3451911 Number of successful extensions: 69667 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68867 Number of HSP's gapped (non-prelim): 796 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
