ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
2dbj|AK067658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
3gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
6gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
7gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
9ref|XM_657364.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.8
10gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 geno... 42 1.8
11emb|Z49866.2|HSN73A10 Human DNA sequence from clone LL22NC03-73A... 42 1.8
12emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chr... 42 1.8
13gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 42 1.8
14dbj|AK138420.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 42 1.8
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
16gb|AF277901.1|AF277901 Rattus norvegicus zinc finger protein HIT... 42 1.8
17gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14... 42 1.8
18emb|AL731647.13| Mouse DNA sequence from clone RP23-226L1 on chr... 42 1.8
19dbj|AK071370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
21ref|NM_133422.1| Rattus norvegicus zinc finger protein 483 (Zfp4... 42 1.8
22gb|AF007558.1|AF007558 Mus musculus hemochromatosis (HFE) gene, ... 42 1.8
23gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 7.2
24gb|AC119908.16| Mus musculus chromosome 7, clone RP24-240G4, com... 40 7.2
25gb|AY371697.2| Homo sapiens integrin, alpha 8 (ITGA8) gene, comp... 40 7.2
26gb|AC122055.4| Mus musculus BAC clone RP24-465O15 from chromosom... 40 7.2
27gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosom... 40 7.2
28gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 7.2
29emb|AL359645.16| Human DNA sequence from clone RP11-39J5 on chro... 40 7.2
30gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Canc... 40 7.2
31emb|BX957334.8| Zebrafish DNA sequence from clone DKEY-205I12 in... 40 7.2
32gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from... 40 7.2
33emb|BX510911.10| Zebrafish DNA sequence from clone CH211-150K17 ... 40 7.2
34gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complet... 40 7.2
35emb|BX539324.15| Zebrafish DNA sequence from clone DKEY-225G6 in... 40 7.2
36gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, compl... 40 7.2
37gb|AC005844.8| Homo sapiens 12 BAC RP11-350L7 (Roswell Park Canc... 40 7.2
38gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, c... 40 7.2
39emb|BX072531.6| Zebrafish DNA sequence from clone CH211-188A22, ... 40 7.2
40gb|AC005768.17|AC005768 Homo sapiens chromosome 4 clone C0315N08... 40 7.2
41gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, co... 40 7.2
42dbj|AK112942.1| Ciona intestinalis cDNA, clone:ciad081d12, full ... 40 7.2
43emb|AL772250.12| Zebrafish DNA sequence from clone CH211-160M22,... 40 7.2
44dbj|AP004508.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.2 
>dbj|AK071663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106G11, full
           insert sequence
          Length = 1557

 Score =  212 bits (107), Expect = 9e-52
 Identities = 292/354 (82%)
 Strand = Plus / Plus

                                                                       
Query: 171 attccttgacgtacaagggttcgattccagatgcaattaatcaatcaagaagggagaaaa 230
           |||||||||||||||| || || |||||||| || ||   ||| ||||||||||| || |
Sbjct: 160 attccttgacgtacaaaggctccattccagacgctatccttcagtcaagaagggataaca 219

                                                                       
Query: 231 aactctttgtaatttacatatcaggtcaagatgaaacctcaagtaatttggaacagtcta 290
           ||||||||||| | |||||||||||| ||||||| || || |||| |||||||||||| |
Sbjct: 220 aactctttgtagtgtacatatcaggtgaagatgagacttcgagtagtttggaacagtcga 279

                                                                       
Query: 291 cattggttgatgaacatgtggctgcagtgataagcagatgttgtgtgttcttgcaactaa 350
           || | ||| |||||  |||||||| ||||||| |||  ||||| || ||| |||| ||||
Sbjct: 280 cacttgttaatgaaagtgtggctgaagtgataggcaactgttgcgtattcctgcatctaa 339

                                                                       
Query: 351 nacagggcgatgttgatacgcttcaattttcagctatctatccacagaagtctgtcccaa 410
            ||| ||| | || ||| |    |||||||||||||| |||||||||||| || ||||||
Sbjct: 340 aacaaggcaacgtcgatgcatcccaattttcagctatatatccacagaaggctatcccaa 399

                                                                       
Query: 411 gtatatctgtcatcggactgaatggtgctatgctatggaatcatgaggggtatattagcc 470
           ||||||||||||| |||| |||||||| ||||||||||  ||||||||| || || ||| 
Sbjct: 400 gtatatctgtcattggacagaatggtgttatgctatggtgtcatgagggatacatcagct 459

                                                                 
Query: 471 cagaagatcttaaggaaagcattgagaaagcttgggctgcccttcatctgcagg 524
           |  ||||||| || ||||  |||||||||||||||||| ||||||| |||||||
Sbjct: 460 cgaaagatctgaaagaaaatattgagaaagcttgggctacccttcacctgcagg 513
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>dbj|AK067658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114I10, full
           insert sequence
          Length = 2068

 Score =  212 bits (107), Expect = 9e-52
 Identities = 292/354 (82%)
 Strand = Plus / Plus

                                                                       
Query: 171 attccttgacgtacaagggttcgattccagatgcaattaatcaatcaagaagggagaaaa 230
           |||||||||||||||| || || |||||||| || ||   ||| ||||||||||| || |
Sbjct: 246 attccttgacgtacaaaggctccattccagacgctatccttcagtcaagaagggataaca 305

                                                                       
Query: 231 aactctttgtaatttacatatcaggtcaagatgaaacctcaagtaatttggaacagtcta 290
           ||||||||||| | |||||||||||| ||||||| || || |||| |||||||||||| |
Sbjct: 306 aactctttgtagtgtacatatcaggtgaagatgagacttcgagtagtttggaacagtcga 365

                                                                       
Query: 291 cattggttgatgaacatgtggctgcagtgataagcagatgttgtgtgttcttgcaactaa 350
           || | ||| |||||  |||||||| ||||||| |||  ||||| || ||| |||| ||||
Sbjct: 366 cacttgttaatgaaagtgtggctgaagtgataggcaactgttgcgtattcctgcatctaa 425

                                                                       
Query: 351 nacagggcgatgttgatacgcttcaattttcagctatctatccacagaagtctgtcccaa 410
            ||| ||| | || ||| |    |||||||||||||| |||||||||||| || ||||||
Sbjct: 426 aacaaggcaacgtcgatgcatcccaattttcagctatatatccacagaaggctatcccaa 485

                                                                       
Query: 411 gtatatctgtcatcggactgaatggtgctatgctatggaatcatgaggggtatattagcc 470
           ||||||||||||| |||| |||||||| ||||||||||  ||||||||| || || ||| 
Sbjct: 486 gtatatctgtcattggacagaatggtgttatgctatggtgtcatgagggatacatcagct 545

                                                                 
Query: 471 cagaagatcttaaggaaagcattgagaaagcttgggctgcccttcatctgcagg 524
           |  ||||||| || ||||  |||||||||||||||||| ||||||| |||||||
Sbjct: 546 cgaaagatctgaaagaaaatattgagaaagcttgggctacccttcacctgcagg 599
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>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0077O14, complete sequence
          Length = 124915

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 390   atccacagaagtctgtcccaagtatatctgtcatcggactgaatggtgctatgctatgg 448
             ||||||||||| || ||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 72874 atccacagaaggctatcccaagtatatctgtcattggacagaatggtgttatgctatgg 72932



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Plus

                                                                         
Query: 171   attccttgacgtacaagggttcgattccagatgcaattaatcaatcaagaagggagaaaa 230
             |||||||||||||||| || || |||||||| || ||   ||| ||||||||||| || |
Sbjct: 70887 attccttgacgtacaaaggctccattccagacgctatccttcagtcaagaagggataaca 70946

                                         
Query: 231   aactctttgtaatttacatatcaggtca 258
             ||||||||||| | ||||||||||||||
Sbjct: 70947 aactctttgtagtgtacatatcaggtca 70974



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 474   aagatcttaaggaaagcattgagaaagcttgggctgcccttcatctgcagg 524
             ||||||| || ||||  |||||||||||||||||| ||||||| |||||||
Sbjct: 73066 aagatctgaaagaaaatattgagaaagcttgggctacccttcacctgcagg 73116
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 390      atccacagaagtctgtcccaagtatatctgtcatcggactgaatggtgctatgctatgg 448
                ||||||||||| || ||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 10642958 atccacagaaggctatcccaagtatatctgtcattggacagaatggtgttatgctatgg 10642900



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                            
Query: 171      attccttgacgtacaagggttcgattccagatgcaattaatcaatcaagaagggagaaaa 230
                |||||||||||||||| || || |||||||| || ||   ||| ||||||||||| || |
Sbjct: 10644945 attccttgacgtacaaaggctccattccagacgctatccttcagtcaagaagggataaca 10644886

                                            
Query: 231      aactctttgtaatttacatatcaggtca 258
                ||||||||||| | ||||||||||||||
Sbjct: 10644885 aactctttgtagtgtacatatcaggtca 10644858



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 474      aagatcttaaggaaagcattgagaaagcttgggctgcccttcatctgcagg 524
                ||||||| || ||||  |||||||||||||||||| ||||||| |||||||
Sbjct: 10642766 aagatctgaaagaaaatattgagaaagcttgggctacccttcacctgcagg 10642716
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 390      atccacagaagtctgtcccaagtatatctgtcatcggactgaatggtgctatgctatgg 448
                ||||||||||| || ||||||||||||||||||| |||| |||||||| ||||||||||
Sbjct: 10714502 atccacagaaggctatcccaagtatatctgtcattggacagaatggtgttatgctatgg 10714444



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                            
Query: 171      attccttgacgtacaagggttcgattccagatgcaattaatcaatcaagaagggagaaaa 230
                |||||||||||||||| || || |||||||| || ||   ||| ||||||||||| || |
Sbjct: 10716489 attccttgacgtacaaaggctccattccagacgctatccttcagtcaagaagggataaca 10716430

                                            
Query: 231      aactctttgtaatttacatatcaggtca 258
                ||||||||||| | ||||||||||||||
Sbjct: 10716429 aactctttgtagtgtacatatcaggtca 10716402



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 474      aagatcttaaggaaagcattgagaaagcttgggctgcccttcatctgcagg 524
                ||||||| || ||||  |||||||||||||||||| ||||||| |||||||
Sbjct: 10714310 aagatctgaaagaaaatattgagaaagcttgggctacccttcacctgcagg 10714260
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>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0015A05, complete sequence
          Length = 127330

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 107   ccgccgccccgctcccccctccctccggatc 137
             ||||||||||||||||||||||  |||||||
Sbjct: 86714 ccgccgccccgctcccccctccgaccggatc 86684
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077J22, complete sequence
          Length = 173903

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 107   ccgccgccccgctcccccctccctccggatc 137
             ||||||||||||||||||||||  |||||||
Sbjct: 48348 ccgccgccccgctcccccctccgaccggatc 48318
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 107     ccgccgccccgctcccccctccctccggatc 137
               ||||||||||||||||||||||  |||||||
Sbjct: 2601828 ccgccgccccgctcccccctccgaccggatc 2601798
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>ref|XM_657364.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4852.2), mRNA
          Length = 2805

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 499  agcttgggctgcccttcatct 519
            |||||||||||||||||||||
Sbjct: 2172 agcttgggctgcccttcatct 2192
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>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
             sequence
          Length = 100239

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 17    aaaaagaaaatctctcctctctcct 41
             ||||| |||||||||||||||||||
Sbjct: 79431 aaaaaaaaaatctctcctctctcct 79407
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>emb|Z49866.2|HSN73A10 Human DNA sequence from clone LL22NC03-73A10 on chromosome 22
            Contains GSSs, complete sequence
          Length = 33685

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 319  gataagcagatgttgtgtgtt 339
            |||||||||||||||||||||
Sbjct: 6875 gataagcagatgttgtgtgtt 6855
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>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the
              Slc17a1 gene for solute carrier family 17 (vesicular
              glutamate transporter) member 1, two genes for novel solute
              carrier family 17 (Slc17) members, two novel genes, the
              gene for a novel C3HC4 type zinc finger (ring finger)
              protein, the gene for an H2a, an H2b, two genes for H3 and
              two genes for H4 histone family members, a H2a histone
              family pseudogene, the H1f1 and  H1f2 genes for H1 histone
              family members 1 and 2, the H3f2 gene for H3 histone
              family, member 2 (H3.2), a novel pseudogene, the Hfe gene
              for hemochromatosis protein (Mr2) and two CpG islands,
              complete sequence
          Length = 186062

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 105    ctccgccgccccgctcccccc 125
              |||||||||||||||||||||
Sbjct: 178263 ctccgccgccccgctcccccc 178243
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>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 107   ccgccgccccgctcccccctc 127
             |||||||||||||||||||||
Sbjct: 74988 ccgccgccccgctcccccctc 75008
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>dbj|AK138420.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230098M24
           product:hemochromatosis, full insert sequence
          Length = 1641

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 105 ctccgccgccccgctcccccc 125
           |||||||||||||||||||||
Sbjct: 756 ctccgccgccccgctcccccc 736
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      ccgccgccccgctcccccctc 127
                |||||||||||||||||||||
Sbjct: 11084069 ccgccgccccgctcccccctc 11084049
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>gb|AF277901.1|AF277901 Rattus norvegicus zinc finger protein HIT-10 mRNA, complete cds
          Length = 2830

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 256  tcaagatgaaacctcaagtaa 276
            |||||||||||||||||||||
Sbjct: 1449 tcaagatgaaacctcaagtaa 1469
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>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence,
            complete sequence
          Length = 121668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 17   aaaaagaaaatctctcctctctcct 41
            ||||| |||||||||||||||||||
Sbjct: 4789 aaaaaaaaaatctctcctctctcct 4765
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>emb|AL731647.13| Mouse DNA sequence from clone RP23-226L1 on chromosome X, complete
             sequence
          Length = 185319

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 213   aatcaagaagggagaaaaaactctt 237
             ||||||||||| |||||||||||||
Sbjct: 48817 aatcaagaaggtagaaaaaactctt 48841
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>dbj|AK071370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094J07, full
           insert sequence
          Length = 3310

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 ccgccgccccgctcccccctc 127
           |||||||||||||||||||||
Sbjct: 81  ccgccgccccgctcccccctc 101
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      ccgccgccccgctcccccctc 127
                |||||||||||||||||||||
Sbjct: 11090509 ccgccgccccgctcccccctc 11090489
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>ref|NM_133422.1| Rattus norvegicus zinc finger protein 483 (Zfp483), mRNA
          Length = 2830

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 256  tcaagatgaaacctcaagtaa 276
            |||||||||||||||||||||
Sbjct: 1449 tcaagatgaaacctcaagtaa 1469
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>gb|AF007558.1|AF007558 Mus musculus hemochromatosis (HFE) gene, complete cds
          Length = 14000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 105  ctccgccgccccgctcccccc 125
            |||||||||||||||||||||
Sbjct: 3473 ctccgccgccccgctcccccc 3453
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    cccgctcccccctccctccg 133
              ||||||||||||||||||||
Sbjct: 201774 cccgctcccccctccctccg 201793



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    cccgctcccccctccctccg 133
              ||||||||||||||||||||
Sbjct: 133634 cccgctcccccctccctccg 133653



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    cccgctcccccctccctccg 133
              ||||||||||||||||||||
Sbjct: 126535 cccgctcccccctccctccg 126516
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>gb|AC119908.16| Mus musculus chromosome 7, clone RP24-240G4, complete sequence
          Length = 190369

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 219   gaagggagaaaaaactctttgtaa 242
             |||||||||||||| |||||||||
Sbjct: 69253 gaagggagaaaaaaatctttgtaa 69276
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>gb|AY371697.2| Homo sapiens integrin, alpha 8 (ITGA8) gene, complete cds
          Length = 206310

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aagggagaaaaaactctttg 239
              ||||||||||||||||||||
Sbjct: 122453 aagggagaaaaaactctttg 122472
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>gb|AC122055.4| Mus musculus BAC clone RP24-465O15 from chromosome 17, complete sequence
          Length = 159138

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    atattagcccagaagatctt 481
              ||||||||||||||||||||
Sbjct: 155188 atattagcccagaagatctt 155207
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>gb|AC122540.4| Mus musculus BAC clone RP24-555K13 from chromosome 17, complete
             sequence
          Length = 149770

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   atattagcccagaagatctt 481
             ||||||||||||||||||||
Sbjct: 17554 atattagcccagaagatctt 17573
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 485   gaaagcattgagaaagcttg 504
             ||||||||||||||||||||
Sbjct: 69039 gaaagcattgagaaagcttg 69058
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>emb|AL359645.16| Human DNA sequence from clone RP11-39J5 on chromosome 10 Contains the
            5' end of the ITGA8 gene for integrin alpha 8 and CpG
            island, complete sequence
          Length = 149200

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  aagggagaaaaaactctttg 239
            ||||||||||||||||||||
Sbjct: 2416 aagggagaaaaaactctttg 2397
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>gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152737

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   caatcaagaagggagaaaaa 231
             ||||||||||||||||||||
Sbjct: 77724 caatcaagaagggagaaaaa 77743
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>emb|BX957334.8| Zebrafish DNA sequence from clone DKEY-205I12 in linkage group 5,
             complete sequence
          Length = 103284

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   aaaaaactctttgtaattta 246
             ||||||||||||||||||||
Sbjct: 93210 aaaaaactctttgtaattta 93191
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>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown,
              complete sequence
          Length = 188107

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    gagaaagcttgggctgccct 513
              ||||||||||||||||||||
Sbjct: 125980 gagaaagcttgggctgccct 125961
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>emb|BX510911.10| Zebrafish DNA sequence from clone CH211-150K17 in linkage group 10,
              complete sequence
          Length = 140584

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    tgggctgcccttcatctgca 522
              ||||||||||||||||||||
Sbjct: 119829 tgggctgcccttcatctgca 119848
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>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence
          Length = 183917

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   caatcaagaagggagaaaaa 231
             ||||||||||||||||||||
Sbjct: 52224 caatcaagaagggagaaaaa 52205
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>emb|BX539324.15| Zebrafish DNA sequence from clone DKEY-225G6 in linkage group 10,
              complete sequence
          Length = 178074

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    tgggctgcccttcatctgca 522
              ||||||||||||||||||||
Sbjct: 163472 tgggctgcccttcatctgca 163453
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>gb|AC091989.3| Homo sapiens chromosome 5 clone RP11-76H13, complete sequence
          Length = 168575

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aaaaagaaaatctctcctct 36
             ||||||||||||||||||||
Sbjct: 91476 aaaaagaaaatctctcctct 91457
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>gb|AC005844.8| Homo sapiens 12 BAC RP11-350L7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 145233

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    gcagtgataagcagatgttg 333
              ||||||||||||||||||||
Sbjct: 119996 gcagtgataagcagatgttg 120015
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>gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   cctcaagtaatttggaacagtcta 290
             ||||||||||||| ||||||||||
Sbjct: 33808 cctcaagtaatttagaacagtcta 33785
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>emb|BX072531.6| Zebrafish DNA sequence from clone CH211-188A22, complete sequence
          Length = 156372

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    aaaaaactctttgtaattta 246
              ||||||||||||||||||||
Sbjct: 115275 aaaaaactctttgtaattta 115256
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>gb|AC005768.17|AC005768 Homo sapiens chromosome 4 clone C0315N08, complete sequence
          Length = 190544

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   tgtaatttacatatcaggtc 257
             ||||||||||||||||||||
Sbjct: 59122 tgtaatttacatatcaggtc 59141
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>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome
          Length = 236120

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   agatgcaattaatcaatcaa 218
             ||||||||||||||||||||
Sbjct: 36060 agatgcaattaatcaatcaa 36041
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>dbj|AK112942.1| Ciona intestinalis cDNA, clone:ciad081d12, full insert sequence
          Length = 2389

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  ggtgctatgctatggaatca 453
            ||||||||||||||||||||
Sbjct: 2184 ggtgctatgctatggaatca 2203
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>emb|AL772250.12| Zebrafish DNA sequence from clone CH211-160M22, complete sequence
          Length = 159758

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   tctacattggttgatgaaca 306
             ||||||||||||||||||||
Sbjct: 80279 tctacattggttgatgaaca 80260
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>dbj|AP004508.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036c,
            complete sequence
          Length = 22758

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  agatgcaattaatcaatcaa 218
            ||||||||||||||||||||
Sbjct: 7081 agatgcaattaatcaatcaa 7062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,430,438
Number of Sequences: 3902068
Number of extensions: 5430438
Number of successful extensions: 159785
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159474
Number of HSP's gapped (non-prelim): 311
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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