ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart06a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469334.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 414 bits (209), Expect = e-113 Identities = 298/328 (90%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||| Sbjct: 95 cgtacgcggtgctgcagtgcggggaggactcggagtacgtgaggaaggcgtacgggggct 154 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 155 acttcgaggtgttcagggcgctgctggcggaggacggcgagcggtggcgggtgtaccgcg 214 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||||||||||||||| || || ||||| || |||||| ||||||| |||||||||| Sbjct: 215 ccgtgcgcggggagctccccggggaggaggaggccgcggggatcgacgggttcgtcatct 274 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||||||||||| |||| |||| | ||||||||| ||||||||||||||||| Sbjct: 275 ccgggagctgcagcgacgcccacgccgacgacccgtggatcgtcgccctcgtcgacctca 334 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggtcc 334 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 335 tccgccgccagaacgccgccggcaagcgcatcctcggcgtctgcttcggccaccaggtcc 394 Query: 335 tgtgccgggcgctgggcgggaagacggg 362 ||||||| ||||||||||| |||||||| Sbjct: 395 tgtgccgagcgctgggcggcaagacggg 422
>dbj|AK071046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079K17, full insert sequence Length = 1135 Score = 414 bits (209), Expect = e-113 Identities = 298/328 (90%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||| Sbjct: 207 cgtacgcggtgctgcagtgcggggaggactcggagtacgtgaggaaggcgtacgggggct 266 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 267 acttcgaggtgttcagggcgctgctggcggaggacggcgagcggtggcgggtgtaccgcg 326 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||||||||||||||| || || ||||| || |||||| ||||||| |||||||||| Sbjct: 327 ccgtgcgcggggagctccccggggaggaggaggccgcggggatcgacgggttcgtcatct 386 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||||||||||| |||| |||| | ||||||||| ||||||||||||||||| Sbjct: 387 ccgggagctgcagcgacgcccacgccgacgacccgtggatcgtcgccctcgtcgacctca 446 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggtcc 334 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 447 tccgccgccagaacgccgccggcaagcgcatcctcggcgtctgcttcggccaccaggtcc 506 Query: 335 tgtgccgggcgctgggcgggaagacggg 362 ||||||| ||||||||||| |||||||| Sbjct: 507 tgtgccgagcgctgggcggcaagacggg 534
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 371 bits (187), Expect = 1e-99 Identities = 270/298 (90%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||| Sbjct: 27043048 cgtacgcggtgctgcagtgcggggaggactcggagtacgtgaggaaggcgtacgggggct 27043107 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27043108 acttcgaggtgttcagggcgctgctggcggaggacggcgagcggtggcgggtgtaccgcg 27043167 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||||||||||||||| || || ||||| || |||||| ||||||| |||||||||| Sbjct: 27043168 ccgtgcgcggggagctccccggggaggaggaggccgcggggatcgacgggttcgtcatct 27043227 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||||||||||| |||| |||| | ||||||||| ||||||||||||||||| Sbjct: 27043228 ccgggagctgcagcgacgcccacgccgacgacccgtggatcgtcgccctcgtcgacctca 27043287 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27043288 tccgccgccagaacgccgccggcaagcgcatcctcggcgtctgcttcggccaccaggt 27043345 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 caggtcctgtgccgggcgctgggcgggaagacggg 362 |||||||||||||| ||||||||||| |||||||| Sbjct: 27045710 caggtcctgtgccgagcgctgggcggcaagacggg 27045744 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tggcgggtgtaccgcgccgt 158 |||||||||||||||||||| Sbjct: 30318688 tggcgggtgtaccgcgccgt 30318669
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 371 bits (187), Expect = 1e-99 Identities = 270/298 (90%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||| Sbjct: 27134371 cgtacgcggtgctgcagtgcggggaggactcggagtacgtgaggaaggcgtacgggggct 27134430 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27134431 acttcgaggtgttcagggcgctgctggcggaggacggcgagcggtggcgggtgtaccgcg 27134490 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||||||||||||||| || || ||||| || |||||| ||||||| |||||||||| Sbjct: 27134491 ccgtgcgcggggagctccccggggaggaggaggccgcggggatcgacgggttcgtcatct 27134550 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||||||||||| |||| |||| | ||||||||| ||||||||||||||||| Sbjct: 27134551 ccgggagctgcagcgacgcccacgccgacgacccgtggatcgtcgccctcgtcgacctca 27134610 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27134611 tccgccgccagaacgccgccggcaagcgcatcctcggcgtctgcttcggccaccaggt 27134668 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 caggtcctgtgccgggcgctgggcgggaagacggg 362 |||||||||||||| ||||||||||| |||||||| Sbjct: 27137033 caggtcctgtgccgagcgctgggcggcaagacggg 27137067 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tggcgggtgtaccgcgccgt 158 |||||||||||||||||||| Sbjct: 30410110 tggcgggtgtaccgcgccgt 30410091
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 371 bits (187), Expect = 1e-99 Identities = 270/298 (90%) Strand = Plus / Minus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||| Sbjct: 16351 cgtacgcggtgctgcagtgcggggaggactcggagtacgtgaggaaggcgtacgggggct 16292 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 16291 acttcgaggtgttcagggcgctgctggcggaggacggcgagcggtggcgggtgtaccgcg 16232 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||||||||||||||| || || ||||| || |||||| ||||||| |||||||||| Sbjct: 16231 ccgtgcgcggggagctccccggggaggaggaggccgcggggatcgacgggttcgtcatct 16172 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||||||||||| |||| |||| | ||||||||| ||||||||||||||||| Sbjct: 16171 ccgggagctgcagcgacgcccacgccgacgacccgtggatcgtcgccctcgtcgacctca 16112 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 16111 tccgccgccagaacgccgccggcaagcgcatcctcggcgtctgcttcggccaccaggt 16054 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 caggtcctgtgccgggcgctgggcgggaagacggg 362 |||||||||||||| ||||||||||| |||||||| Sbjct: 13689 caggtcctgtgccgagcgctgggcggcaagacggg 13655
>gb|BT017147.1| Zea mays clone EL01N0366H08.c mRNA sequence Length = 1125 Score = 327 bits (165), Expect = 1e-86 Identities = 281/320 (87%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| ||||||||||||| |||||||||| |||||||||| | |||||| |||| Sbjct: 171 cgtacgcggtgctgcagtgcggcgaggactcggagtacgtgcggcagaagtacggcggct 230 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||| || |||||||||||||||| ||||||||| ||| |||||||||||||| ||| Sbjct: 231 acttcgccgtcttccgcgcgctgctggaggaggacggcgagaggtggcgggtgtacagcg 290 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||| ||||||||||| || |||||| || || || ||| ||||||| |||||||||| Sbjct: 291 ccgtccgcggggagctccccgccgacgccgaggcagccgggttcgacgggttcgtcatct 350 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||| |||||||||||||||| |||| ||||||||||| |||||||||||| Sbjct: 351 ccgggagctgcgccgacgcgcacggcgacgagccctggatcctcgcgctcgtcgacctca 410 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggtcc 334 ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 411 cccgccgcgtccacgccgccggcaagcgcgtcctcggcgtctgcttcggccaccagatcc 470 Query: 335 tgtgccgggcgctgggcggg 354 |||||||||||||||||||| Sbjct: 471 tgtgccgggcgctgggcggg 490
>gb|BT017971.1| Zea mays clone EL01N0524B08.c mRNA sequence Length = 1081 Score = 327 bits (165), Expect = 1e-86 Identities = 281/320 (87%) Strand = Plus / Plus Query: 35 cgtacgcgctgctgcagtgcggggaggactcggcgtacgtgcgggacgcgtacgggggct 94 |||||||| ||||||||||||| |||||||||| |||||||||| | |||||| |||| Sbjct: 166 cgtacgcggtgctgcagtgcggcgaggactcggagtacgtgcggcagaagtacggcggct 225 Query: 95 acttcgaggtgttccgcgcgctgctggcggaggacggggagcggtggcgggtgtaccgcg 154 |||||| || |||||||||||||||| ||||||||| ||| |||||||||||||| ||| Sbjct: 226 acttcgccgtcttccgcgcgctgctggaggaggacggcgagaggtggcgggtgtacagcg 285 Query: 155 ccgtgcgcggggagctgccgtccgacgaggacgcggcgggggtcgacggcttcgtcatct 214 |||| ||||||||||| || |||||| || || || ||| ||||||| |||||||||| Sbjct: 286 ccgtccgcggggagctccccgccgacgccgaggcagccgggttcgacgggttcgtcatct 345 Query: 215 ccggcagctgcagcgacgcgcacggcgacnagccgtggatcctcgccctcgtcgacctcg 274 |||| |||||| |||||||||||||||| |||| ||||||||||| |||||||||||| Sbjct: 346 ccgggagctgcgccgacgcgcacggcgacgagccctggatcctcgcgctcgtcgacctca 405 Query: 275 tccgccgccagctcgccgccggcaagcgcgtcctcggcgtctgcttcggccaccaggtcc 334 ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 406 cccgccgcgtccacgccgccggcaagcgcgtcctcggcgtctgcttcggccaccagatcc 465 Query: 335 tgtgccgggcgctgggcggg 354 |||||||||||||||||||| Sbjct: 466 tgtgccgggcgctgggcggg 485
>dbj|AK107431.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-A07, full insert sequence Length = 1294 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 296 gcaagcgcgtcctcggcgtctgcttcggccaccaggtcctgtgccgggcgctgggcggg 354 ||||||| |||||||| ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 532 gcaagcgtctcctcggcatctgcttcggccaccaggtgatatgccgcgcgctgggcggg 590
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 295 ggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||| |||||||| ||||||||||||||||||| Sbjct: 4393148 ggcaagcgcatcctcggcatctgcttcggccaccaggt 4393111
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 295 ggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||| |||||||| ||||||||||||||||||| Sbjct: 76712 ggcaagcgcatcctcggcatctgcttcggccaccaggt 76675
>dbj|AK111348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G04, full insert sequence Length = 1338 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 295 ggcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||||| |||||||| ||||||||||||||||||| Sbjct: 414 ggcaagcgcatcctcggcatctgcttcggccaccaggt 451
>gb|AF262220.2|AF262220 Streptomyces venezuelae chloramphenicol biosynthetic gene cluster, partial sequence Length = 14159 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 303 cgtcctcggcgtctgcttcggccaccagg 331 |||||||||||||||| |||||||||||| Sbjct: 8377 cgtcctcggcgtctgcctcggccaccagg 8405
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 296 gcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||| |||||||| ||||||||||||||||||| Sbjct: 15327512 gcaagcgtctcctcggcatctgcttcggccaccaggt 15327548
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 296 gcaagcgcgtcctcggcgtctgcttcggccaccaggt 332 ||||||| |||||||| ||||||||||||||||||| Sbjct: 106701 gcaagcgtctcctcggcatctgcttcggccaccaggt 106737
>dbj|AB116234.1| Streptomyces venezuelae papA, papC, papB, ORFIV genes for 4-amino-4-deoxychorismate synthase, 4-amino-4-deoxyprephenate dehydrogenase, 4-amino-4-deoxychorismate mutase, hypothetical protein, complete cds Length = 5251 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 303 cgtcctcggcgtctgcttcggccaccagg 331 |||||||||||||||| |||||||||||| Sbjct: 878 cgtcctcggcgtctgcctcggccaccagg 906
>gb|U21728.1|SVU21728 Streptomyces venezuelae p-aminobenzoic acid synthase (pabAB) gene, complete cds Length = 2660 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 303 cgtcctcggcgtctgcttcggccaccagg 331 |||||||||||||||| |||||||||||| Sbjct: 875 cgtcctcggcgtctgcctcggccaccagg 903
>gb|AY632762.1| Mycobacterium avium carbamoyl-phosphate synthase subunit (carA) gene, complete cds Length = 1122 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 308 tcggcgtctgcttcggccaccaggtcctgtgccgggcgctgggc 351 ||||| |||| |||||| ||||| ||||| |||||||||||||| Sbjct: 764 tcggcatctgtttcggcaaccagatcctgggccgggcgctgggc 807
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 308 tcggcgtctgcttcggccaccaggtcctgtgccgggcgctgggc 351 ||||| ||||||||||| ||||| ||||| |||| ||||||||| Sbjct: 3833810 tcggcatctgcttcggcaaccagatcctgggccgcgcgctgggc 3833767
>gb|AY110659.1| Zea mays CL4162_1 mRNA sequence Length = 878 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 266 tcgacctcgtccgccgccagctcgccgc 293 |||||||| ||||||||||||||||||| Sbjct: 224 tcgacctcctccgccgccagctcgccgc 251
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 308 tcggcgtctgcttcggccaccaggtcctgtgccgggcgctgggc 351 ||||| |||| |||||| ||||| ||||| |||||||||||||| Sbjct: 1170769 tcggcatctgtttcggcaaccagatcctgggccgggcgctgggc 1170812
>gb|AY106110.1| Zea mays PCO079634 mRNA sequence Length = 827 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 tcctgtgccgggcgctgggcggg 354 ||||||||||||||||||||||| Sbjct: 144 tcctgtgccgggcgctgggcggg 166
>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73 Length = 194862 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccaggt 332 |||||| ||||||||||||||||||| Sbjct: 71642 ctcggcatctgcttcggccaccaggt 71667
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 87 cgggggctacttcgaggtgttccgcg 112 ||||| |||||||||||||||||||| Sbjct: 6338254 cggggcctacttcgaggtgttccgcg 6338229 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 160 cgcggggagctgccgtccgacgaggacgc 188 ||||||||||||||| |||| |||||||| Sbjct: 3477299 cgcggggagctgccgcccgaggaggacgc 3477327 Score = 40.1 bits (20), Expect = 5.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 308 tcggcgtctgcttcggccaccaggtcctgtgccgggcgct 347 ||||| ||||||||||| ||||| ||||| |||| ||||| Sbjct: 8193903 tcggcatctgcttcggcaaccagatcctgggccgcgcgct 8193942 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 261 cctcgtcgacctcgtccgccgccagctc 288 ||||||| ||||||||||||| |||||| Sbjct: 4227766 cctcgtccacctcgtccgccgtcagctc 4227793
>gb|AE004634.1| Pseudomonas aeruginosa PAO1, section 195 of 529 of the complete genome Length = 10464 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 cgtcctcggcgtctgcttcggc 324 |||||||||||||||||||||| Sbjct: 8328 cgtcctcggcgtctgcttcggc 8349
>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 Length = 134784 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 ctcggcgtctgcttcggccaccaggt 332 |||||| ||||||||||||||||||| Sbjct: 29675 ctcggcatctgcttcggccaccaggt 29650
>ref|NM_183971.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 543 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tcgtccgccgccagctcgccgccgg 296 |||||||||||||| |||||||||| Sbjct: 460 tcgtccgccgccagttcgccgccgg 436
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ggcgggtgtaccgcgccgtgc 160 ||||||||||||||||||||| Sbjct: 86116 ggcgggtgtaccgcgccgtgc 86096
>gb|AY258138.1| Pseudomonas aeruginosa strain C gene island PAGI-4(C) sequence Length = 34398 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 32462 ctcggcgtctgcctcggccaccagg 32486
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tcgacctcgtccgccgccagc 286 ||||||||||||||||||||| Sbjct: 857276 tcgacctcgtccgccgccagc 857256
>gb|AY162971.1| Micromonospora chersina dynemicin enediyne iterative type I polyketide synthase gene locus, partial sequence Length = 6653 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gctgccgtccgacgaggacgc 188 ||||||||||||||||||||| Sbjct: 1687 gctgccgtccgacgaggacgc 1667
>gb|AF189258.1|AF189258 Streptomyces venezuelae aminase (pabB) and amidotransferase (pabA) genes, complete cds; and transcriptional regulator gene, partial cds Length = 3814 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 2065 ctcggcgtctgcctcggccaccagg 2089
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ggcgggtgtaccgcgccgtgc 160 ||||||||||||||||||||| Sbjct: 14160178 ggcgggtgtaccgcgccgtgc 14160198
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tcgtccgccgccagctcgccgccgg 296 |||||||||||||| |||||||||| Sbjct: 13627323 tcgtccgccgccagttcgccgccgg 13627299
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tcgtccgccgccagctcgccgccgg 296 |||||||||||||| |||||||||| Sbjct: 181283 tcgtccgccgccagttcgccgccgg 181259
>gb|AE004533.1| Pseudomonas aeruginosa PAO1, section 94 of 529 of the complete genome Length = 12967 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 1897 ctcggcgtctgcctcggccaccagg 1921
>gb|AF546156.1| Micromonospora chersinia UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10136 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 gctgccgtccgacgaggacgc 188 ||||||||||||||||||||| Sbjct: 4918 gctgccgtccgacgaggacgc 4898
>dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151H08 Length = 123001 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 tcgtccgccgccagctcgccgccgg 296 |||||||||||||| |||||||||| Sbjct: 32561 tcgtccgccgccagttcgccgccgg 32537
>dbj|AK073557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046C19, full insert sequence Length = 2846 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ggcgggtgtaccgcgccgtgc 160 ||||||||||||||||||||| Sbjct: 506 ggcgggtgtaccgcgccgtgc 526
>gb|AF031571.1|AF031571 Pseudomonas aeruginosa unknown protein genes, complete cds Length = 1659 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 150 ctcggcgtctgcctcggccaccagg 174
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ggcgggtgtaccgcgccgtgc 160 ||||||||||||||||||||| Sbjct: 14242180 ggcgggtgtaccgcgccgtgc 14242200
>gb|M33811.1|PSEPHNABB P.aeruginosa anthranilate synthase alpha (phnA) and beta (phnB) subunit genes, complete cds Length = 3065 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 2208 ctcggcgtctgcctcggccaccagg 2232
>gb|M33810.1|PSEPHNABA P.aeruginosa anthranilate synthase alpha (phnA) and beta (phnB) subunit genes, complete cds Length = 4371 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 3514 ctcggcgtctgcctcggccaccagg 3538
>gb|M15733.1|PSETRPEG P.aeruginosa trpE gene encoding the large glutamine amidotransferase subunit, 3' end, and trpG gene encoding the small glutamine amidotransferase subunit, complete cds Length = 1184 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccagg 331 |||||||||||| |||||||||||| Sbjct: 330 ctcggcgtctgcctcggccaccagg 354
>ref|NM_119201.1| Arabidopsis thaliana catalytic AT4G30550 mRNA, complete cds Length = 1103 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccag 330 |||||| ||||||||||||||||| Sbjct: 506 ctcggcatctgcttcggccaccag 529
>ref|XM_550657.1| Oryza sativa (japonica cultivar-group), mRNA Length = 306 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgccgccagctcgccgccg 295 |||||||||||||||||||| Sbjct: 136 ccgccgccagctcgccgccg 117
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tgccgtccgacgaggacgcg 189 |||||||||||||||||||| Sbjct: 580487 tgccgtccgacgaggacgcg 580506
>ref|XM_481142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggtgtaccgcgccgtgcgcg 163 |||||||||||||||||||| Sbjct: 1221 ggtgtaccgcgccgtgcgcg 1240
>ref|NM_197174.1| Oryza sativa (japonica cultivar-group) putative membrane-associated protein (OSJNBa0017E08.19), mRNA Length = 3660 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 3247 tccgccgccagctcgccgcc 3228
>ref|NM_195914.1| Oryza sativa (japonica cultivar-group) putative formin-like protein (OSJNBb0078C13.8), mRNA Length = 2550 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgtccgacgaggacgcggcg 192 |||||||||||||||||||| Sbjct: 653 cgtccgacgaggacgcggcg 672
>ref|XM_469705.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tggcgggtgtaccgcgccgt 158 |||||||||||||||||||| Sbjct: 301 tggcgggtgtaccgcgccgt 320
>ref|XM_513476.1| PREDICTED: Pan troglodytes similar to DNA-damage-inducible protein gadd45 - human (LOC456929), mRNA Length = 856 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 453 tcgtcgtcctcgtccgccgccagc 430
>ref|XM_472342.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tccgccgccagctcgccgccggca 298 ||||||||||||||||||| |||| Sbjct: 86 tccgccgccagctcgccgcaggca 109
>gb|BT017762.1| Zea mays clone EL01N0501F08.c mRNA sequence Length = 1235 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 tcctcgccctcgtcgacctcgtcc 277 |||||| ||||||||||||||||| Sbjct: 254 tcctcgtcctcgtcgacctcgtcc 231
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gccggtggtgaccgcggcgg 25 |||||||||||||||||||| Sbjct: 529141 gccggtggtgaccgcggcgg 529122
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 2307950 cggtgccggtggtg-ccgcggcgggagg 2307924 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 2301881 cggtgccggtggtg-ccgcggcgggagg 2301855
>gb|AY354948.1|AY354948S1 Marattia attenuata NADH dehydrogenase subunit 1 (nad1) gene, partial cds; mitochondrial Length = 5444 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cagtgcggggaggactcggcgtac 72 |||| ||||||||||||||||||| Sbjct: 3066 cagttcggggaggactcggcgtac 3089
>gb|AE009335.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 105 of 187 of the complete sequence Length = 5557 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 4308 tccgccgccagctcgccgcc 4289
>gb|AE008279.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 83 of 187 of the complete sequence Length = 13971 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 11095 tccgccgccagctcgccgcc 11114
>ref|XM_449530.1| Candida glabrata CBS138 hypothetical protein (CAGL0M04213g) partial mRNA Length = 768 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 tgcttcggccaccaggtcct 335 |||||||||||||||||||| Sbjct: 343 tgcttcggccaccaggtcct 362
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cgcgctgctggcggaggacg 130 |||||||||||||||||||| Sbjct: 4044941 cgcgctgctggcggaggacg 4044960
>gb|AY143831.1| Arabidopsis thaliana At4g30550/F17I23_110 mRNA, complete cds Length = 750 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccag 330 |||||| ||||||||||||||||| Sbjct: 298 ctcggcatctgcttcggccaccag 321
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tgcttcggccaccaggtcct 335 |||||||||||||||||||| Sbjct: 464181 tgcttcggccaccaggtcct 464162
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 226914 cggtgccggtggtg-ccgcggcgggagg 226888 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 220845 cggtgccggtggtg-ccgcggcgggagg 220819
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 cgtccgacgaggacgcggcg 192 |||||||||||||||||||| Sbjct: 63962 cgtccgacgaggacgcggcg 63981
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 cgtccgccgccagctcgccgccgg 296 |||||||||| ||||||||||||| Sbjct: 93733 cgtccgccgcaagctcgccgccgg 93756
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 84530 cggtgccggtggtg-ccgcggcgggagg 84504 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 cggtgccggtggtgaccgcggcgggagg 29 |||||||||||||| ||||||||||||| Sbjct: 78461 cggtgccggtggtg-ccgcggcgggagg 78435
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 80721 tccgccgccagctcgccgcc 80740
>gb|AY135686.1| Homo sapiens growth arrest and DNA-damage-inducible, alpha (GADD45A) gene, complete cds Length = 4417 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 2086 tcgtcgtcctcgtccgccgccagc 2063
>dbj|AB176962.1| Felis catus GADD45 mRNA for growth arrest and DNA damage-inducible protein 45, complete cds Length = 539 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 197 tcgtcgtcctcgtccgccgccagc 174
>emb|CR623510.1| full-length cDNA clone CS0DM004YN11 of Fetal liver of Homo sapiens (human) Length = 1316 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 476 tcgtcgtcctcgtccgccgccagc 453
>emb|CR609553.1| full-length cDNA clone CS0DI002YG06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1304 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 472 tcgtcgtcctcgtccgccgccagc 449
>emb|CR613302.1| full-length cDNA clone CS0DF014YK04 of Fetal brain of Homo sapiens (human) Length = 1319 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 480 tcgtcgtcctcgtccgccgccagc 457
>emb|CR612719.1| full-length cDNA clone CS0DF009YB09 of Fetal brain of Homo sapiens (human) Length = 1492 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 631 tcgtcgtcctcgtccgccgccagc 608
>emb|CR612467.1| full-length cDNA clone CS0DI051YM09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1128 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 302 tcgtcgtcctcgtccgccgccagc 279
>emb|CR608507.1| full-length cDNA clone CS0DL007YH19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1320 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 480 tcgtcgtcctcgtccgccgccagc 457
>gb|AY064159.1| Arabidopsis thaliana AT4g30550/F17I23_110 mRNA, complete cds Length = 932 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccag 330 |||||| ||||||||||||||||| Sbjct: 404 ctcggcatctgcttcggccaccag 427
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tggcgggtgtaccgcgccgt 158 |||||||||||||||||||| Sbjct: 110368 tggcgggtgtaccgcgccgt 110349
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tcgccgccggcaagcgcgtc 306 |||||||||||||||||||| Sbjct: 3250612 tcgccgccggcaagcgcgtc 3250631
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tccgccgccagctcgccgccggca 298 ||||||||||||||||||| |||| Sbjct: 19685697 tccgccgccagctcgccgcaggca 19685720
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 18425972 tccgccgccagctcgccgcc 18425953 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cgtccgacgaggacgcggcg 192 |||||||||||||||||||| Sbjct: 9969993 cgtccgacgaggacgcggcg 9969974
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggtgtaccgcgccgtgcgcg 163 |||||||||||||||||||| Sbjct: 10184150 ggtgtaccgcgccgtgcgcg 10184131
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgccgccagctcgccgccg 295 |||||||||||||||||||| Sbjct: 2731927 ccgccgccagctcgccgccg 2731908
>ref|NM_001924.2| Homo sapiens growth arrest and DNA-damage-inducible, alpha (GADD45A), mRNA Length = 1355 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 492 tcgtcgtcctcgtccgccgccagc 469
>gb|AY086910.1| Arabidopsis thaliana clone 29388 mRNA, complete sequence Length = 1104 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctcggcgtctgcttcggccaccag 330 |||||| ||||||||||||||||| Sbjct: 506 ctcggcatctgcttcggccaccag 529
>gb|L24498.1|HUMGAD45A Homo sapiens gadd45 gene, complete cds Length = 5378 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 3457 tcgtcgtcctcgtccgccgccagc 3434
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgccgccagctcgccgccg 295 |||||||||||||||||||| Sbjct: 143674 ccgccgccagctcgccgccg 143655
>gb|AY892912.1| Synthetic construct Homo sapiens clone FLH141307.01L growth arrest and DNA-damage-inducible alpha (GADD45A) mRNA, partial cds Length = 498 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 197 tcgtcgtcctcgtccgccgccagc 174
>dbj|AB110444.1| Oryza sativa (japonica cultivar-group) rf-1gene for fertility restorer, hypothetical proteins, complete cds Length = 45315 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 29822 tccgccgccagctcgccgcc 29803
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 27013 tccgccgccagctcgccgcc 26994
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggtgtaccgcgccgtgcgcg 163 |||||||||||||||||||| Sbjct: 143496 ggtgtaccgcgccgtgcgcg 143477
>dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B11, full insert sequence Length = 2569 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggtgtaccgcgccgtgcgcg 163 |||||||||||||||||||| Sbjct: 2111 ggtgtaccgcgccgtgcgcg 2130
>gb|DQ008445.1| Homo sapiens growth arrest and DNA-damage-inducible 45 alpha (GADD45A) mRNA, complete cds, alternatively spliced Length = 890 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 376 tcgtcgtcctcgtccgccgccagc 353
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 cgccagctcgccgccggcaa 299 |||||||||||||||||||| Sbjct: 1553256 cgccagctcgccgccggcaa 1553237
>gb|BC011757.2| Homo sapiens growth arrest and DNA-damage-inducible, alpha, mRNA (cDNA clone MGC:19584 IMAGE:3530326), complete cds Length = 1013 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 478 tcgtcgtcctcgtccgccgccagc 455
>dbj|AK064770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A16, full insert sequence Length = 4748 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 4212 tccgccgccagctcgccgcc 4193
>emb|AL136120.8| Human DNA sequence from clone RP5-975D15 on chromosome 1p31.3-32.2 Contains the GADD45A gene for growth arrest and DNA-damage-inducible alpha, the 3' end of the GNG12 gene for guanine nucleotide binding protein (G protein) gamma 12 and a CpG island, complete sequence Length = 104198 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 16013 tcgtcgtcctcgtccgccgccagc 15990
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 tcgccgccggcaagcgcgtc 306 |||||||||||||||||||| Sbjct: 810796 tcgccgccggcaagcgcgtc 810777
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tccgccgccagctcgccgcc 294 |||||||||||||||||||| Sbjct: 18436025 tccgccgccagctcgccgcc 18436006 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cgtccgacgaggacgcggcg 192 |||||||||||||||||||| Sbjct: 9976032 cgtccgacgaggacgcggcg 9976013
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tccgccgccagctcgccgccggca 298 ||||||||||||||||||| |||| Sbjct: 136423 tccgccgccagctcgccgcaggca 136446
>gb|M60974.1|HUMGADD45 Human growth arrest and DNA-damage-inducible protein (gadd45) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 tcgtcgacctcgtccgccgccagc 286 |||||| ||||||||||||||||| Sbjct: 480 tcgtcgtcctcgtccgccgccagc 457 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,078,337 Number of Sequences: 3902068 Number of extensions: 2078337 Number of successful extensions: 59041 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 55675 Number of HSP's gapped (non-prelim): 3453 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
