ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart06a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-20
2dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-20
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 72 6e-10
4dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic D... 72 6e-10
5dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic D... 72 6e-10
6gb|AE011987.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.14
7dbj|AB118638.1| Macrobdella decora HbIIA mRNA for hemoglobin, ch... 44 0.14
8ref|XM_449212.1| Candida glabrata CBS138, CAGL0L10208g partial mRNA 42 0.57
9emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 0.57
10emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 42 0.57
11emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC... 42 0.57
12gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 0.57
13ref|XM_755863.1| Ustilago maydis 521 hypothetical protein (UM048... 40 2.2
14ref|XM_388140.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 2.2
15gb|AC091518.22| Mus musculus strain 129/SvJ clone mgs1-257j2 map... 40 2.2
16gb|AF441860.1| Mus musculus GADD45beta (Gadd45b) gene, promoter ... 40 2.2
17emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, stra... 40 2.2
18gb|AC152413.5| Mus musculus BAC clone RP23-431A21 from chromosom... 40 2.2
19gb|AF176045.3|AF176045 Mus musculus MYD118 protein (Myd118) gene... 40 2.2
20gb|AC152500.7| Mus musculus BAC clone RP24-555P14 from chromosom... 40 2.2
21ref|NM_001036725.1| Arabidopsis thaliana CYCD5;1; cyclin-depende... 38 8.8
22ref|NM_119926.3| Arabidopsis thaliana CYCD5;1; cyclin-dependent ... 38 8.8
23gb|AY497610.2| Candida viswanathii strain CBS 4024 RNA polymeras... 38 8.8
24gb|BC056543.1| Danio rerio acidic (leucine-rich) nuclear phospho... 38 8.8
25gb|BC068403.1| Danio rerio acidic (leucine-rich) nuclear phospho... 38 8.8
26ref|NM_190415.1| Oryza sativa (japonica cultivar-group), predic... 38 8.8
27gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 38 8.8
28ref|XM_586995.2| PREDICTED: Bos taurus similar to C/EBP-induced ... 38 8.8
29ref|XM_593211.2| PREDICTED: Bos taurus similar to Smith-Magenis ... 38 8.8
30ref|NM_213277.1| Danio rerio acidic (leucine-rich) nuclear phosp... 38 8.8
31ref|XM_653423.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 8.8
32ref|XM_451429.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09823g ... 38 8.8
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 8.8
34ref|XM_755664.1| Ustilago maydis 521 hypothetical protein (UM046... 38 8.8
35emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, comple... 38 8.8
36gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 38 8.8
37gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 38 8.8
38emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 8.8
39emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, ... 38 8.8
40emb|CR394542.5| Zebrafish DNA sequence from clone DKEY-91I10 in ... 38 8.8
41gb|BC098881.1| Danio rerio acidic (leucine-rich) nuclear phospho... 38 8.8
42emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, c... 38 8.8
43gb|DQ397611.1| Cenarchaeum symbiosum clone C15A07, complete sequ... 38 8.8
44gb|DQ397598.1| Cenarchaeum symbiosum clone C06E05, complete sequ... 38 8.8
45gb|DQ397588.1| Cenarchaeum symbiosum clone C01F04, complete sequ... 38 8.8
46gb|AF367052.1|AF367052 Lesquerella fendleri 3-ketoacyl-CoA synth... 38 8.8
47dbj|AK221431.1| Arabidopsis thaliana mRNA for putative protein, ... 38 8.8
48gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42... 38 8.8
49gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 38 8.8
50ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of hom... 38 8.8
51dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
54dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
55dbj|AB199751.1| Pinguicula acuminata genes for 18S rRNA, ITS1, 5... 38 8.8
56ref|XM_233085.3| PREDICTED: Rattus norvegicus similar to SET pro... 38 8.8
57ref|XM_344791.2| PREDICTED: Rattus norvegicus similar to SAM and... 38 8.8
58gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone... 38 8.8
59dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
60dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
61dbj|BS000120.2| Pan troglodytes chromosome 22 clone:RP43-007D11,... 38 8.8
62dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.8
63ref|XM_314998.2| Anopheles gambiae str. PEST ENSANGP00000002371 ... 38 8.8
64gb|AF216973.1|AF216973 Drosophila melanogaster l(2)01289 gene, c... 38 8.8
65dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.8
66emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 38 8.8
67dbj|AK067043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.8
68emb|BX572633.7| Zebrafish DNA sequence from clone CH211-276P10 i... 38 8.8
69gb|AC153569.4| Mus musculus 10 BAC RP23-225D5 (Roswell Park Canc... 38 8.8
70gb|AF084543.1|AF084543 Tupaia herpesvirus major DNA binding prot... 38 8.8
71gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 ... 38 8.8
72emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, B... 38 8.8
73gb|BC071305.1| Danio rerio ELL associated factor 2, mRNA (cDNA c... 38 8.8
74ref|NM_001002162.1| Danio rerio ELL associated factor 2 (eaf2), ... 38 8.8 
>dbj|AK068719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162F05, full
           insert sequence
          Length = 1104

 Score =  105 bits (53), Expect = 5e-20
 Identities = 90/102 (88%), Gaps = 3/102 (2%)
 Strand = Plus / Plus

                                                                       
Query: 80  cggcgggccactctacgagctgtcg---ccgctgctggcgcaccttcccgtcaggacagg 136
           ||||||||| |||||||||||| ||   |||||||||||||| |||||  ||||||||||
Sbjct: 392 cggcgggccgctctacgagctggcggcgccgctgctggcgcagcttcctctcaggacagg 451

                                                     
Query: 137 gctgtctaagtactacnaagggaagtcccagtccttcacatc 178
           ||| || ||||||||| ||||||||||||| |||||||||||
Sbjct: 452 gctatccaagtactaccaagggaagtcccaatccttcacatc 493
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>dbj|AK068350.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142H05, full
           insert sequence
          Length = 1176

 Score =  105 bits (53), Expect = 5e-20
 Identities = 90/102 (88%), Gaps = 3/102 (2%)
 Strand = Plus / Plus

                                                                       
Query: 80  cggcgggccactctacgagctgtcg---ccgctgctggcgcaccttcccgtcaggacagg 136
           ||||||||| |||||||||||| ||   |||||||||||||| |||||  ||||||||||
Sbjct: 471 cggcgggccgctctacgagctggcggcgccgctgctggcgcagcttcctctcaggacagg 530

                                                     
Query: 137 gctgtctaagtactacnaagggaagtcccagtccttcacatc 178
           ||| || ||||||||| ||||||||||||| |||||||||||
Sbjct: 531 gctatccaagtactaccaagggaagtcccaatccttcacatc 572
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 128      caggacagggctgtctaagtactacnaagggaagtcccagtccttcacatc 178
                |||||||||||| || ||||||||| ||||||||||||| |||||||||||
Sbjct: 21025596 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatc 21025646



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 42/48 (87%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                                
Query: 80       cggcgggccactctacgagctgtcg---ccgctgctggcgcaccttcc 124
                ||||||||| |||||||||||| ||   |||||||||||||| |||||
Sbjct: 21025049 cggcgggccgctctacgagctggcggcgccgctgctggcgcagcttcc 21025096
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>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0090E14
          Length = 161119

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                 
Query: 128    caggacagggctgtctaagtactacnaagggaagtcccagtccttcacatc 178
              |||||||||||| || ||||||||| ||||||||||||| |||||||||||
Sbjct: 152520 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatc 152570



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 42/48 (87%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                              
Query: 80     cggcgggccactctacgagctgtcg---ccgctgctggcgcaccttcc 124
              ||||||||| |||||||||||| ||   |||||||||||||| |||||
Sbjct: 151973 cggcgggccgctctacgagctggcggcgccgctgctggcgcagcttcc 152020
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>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E12
          Length = 139750

 Score = 71.9 bits (36), Expect = 6e-10
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 128   caggacagggctgtctaagtactacnaagggaagtcccagtccttcacatc 178
             |||||||||||| || ||||||||| ||||||||||||| |||||||||||
Sbjct: 22597 caggacagggctatccaagtactaccaagggaagtcccaatccttcacatc 22647



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 42/48 (87%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                             
Query: 80    cggcgggccactctacgagctgtcg---ccgctgctggcgcaccttcc 124
             ||||||||| |||||||||||| ||   |||||||||||||| |||||
Sbjct: 22050 cggcgggccgctctacgagctggcggcgccgctgctggcgcagcttcc 22097
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>gb|AE011987.1| Xanthomonas axonopodis pv. citri str. 306,  section 365 of 469 of the
            complete genome
          Length = 12063

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 97   agctgtcgccgctgctggcgca 118
            ||||||||||||||||||||||
Sbjct: 5396 agctgtcgccgctgctggcgca 5375
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>dbj|AB118638.1| Macrobdella decora HbIIA mRNA for hemoglobin, chain IIA, complete
           cds
          Length = 967

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 28  cgtcgtcttcatcgtcatcgccgtcg 53
           ||||||| ||||||||||||||||||
Sbjct: 769 cgtcgtcgtcatcgtcatcgccgtcg 794
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>ref|XM_449212.1| Candida glabrata CBS138, CAGL0L10208g partial mRNA
          Length = 1716

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 28   cgtcgtcttcatcgtcatcgccgtc 52
            |||||||||||||||||||| ||||
Sbjct: 1627 cgtcgtcttcatcgtcatcgtcgtc 1603
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 32      gtcttcatcgtcatcgccgtcggat 56
               |||||||||||||||||| ||||||
Sbjct: 3002822 gtcttcatcgtcatcgccatcggat 3002798
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 28      cgtcgtcttcatcgtcatcgccgtc 52
               |||||||||||||||||||| ||||
Sbjct: 1096300 cgtcgtcttcatcgtcatcgtcgtc 1096324
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>emb|AL442164.1|NCB2J23 Neurospora crassa DNA linkage group I BAC clone B2J23
          Length = 65725

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 28    cgtcgtcttcatcgtcatcgccgtc 52
             |||||||||| ||||||||||||||
Sbjct: 16419 cgtcgtcttcgtcgtcatcgccgtc 16443
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 103     cgccgctgctggcgcaccttc 123
               |||||||||||||||||||||
Sbjct: 1458610 cgccgctgctggcgcaccttc 1458590
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>ref|XM_755863.1| Ustilago maydis 521 hypothetical protein (UM04809.1) partial mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  cgtcgtcttcatcgtcatcg 47
           ||||||||||||||||||||
Sbjct: 667 cgtcgtcttcatcgtcatcg 648
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>ref|XM_388140.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07964.1)
           partial mRNA
          Length = 2847

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  cgtcgtcttcatcgtcatcg 47
           ||||||||||||||||||||
Sbjct: 766 cgtcgtcttcatcgtcatcg 747
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>gb|AC091518.22| Mus musculus strain 129/SvJ clone mgs1-257j2 map 10, complete sequence
          Length = 124270

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     agctgtcgccgctgctggcg 116
              ||||||||||||||||||||
Sbjct: 111651 agctgtcgccgctgctggcg 111632
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>gb|AF441860.1| Mus musculus GADD45beta (Gadd45b) gene, promoter region and complete
            cds
          Length = 7391

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   agctgtcgccgctgctggcg 116
            ||||||||||||||||||||
Sbjct: 5165 agctgtcgccgctgctggcg 5184
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>emb|BX842654.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 9/11
          Length = 344249

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cgtcgtcttcatcgtcatcg 47
              ||||||||||||||||||||
Sbjct: 181641 cgtcgtcttcatcgtcatcg 181622
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>gb|AC152413.5| Mus musculus BAC clone RP23-431A21 from chromosome 10, complete sequence
          Length = 195951

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     agctgtcgccgctgctggcg 116
              ||||||||||||||||||||
Sbjct: 179954 agctgtcgccgctgctggcg 179973
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>gb|AF176045.3|AF176045 Mus musculus MYD118 protein (Myd118) gene, complete cds
          Length = 9978

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   agctgtcgccgctgctggcg 116
            ||||||||||||||||||||
Sbjct: 4510 agctgtcgccgctgctggcg 4529
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>gb|AC152500.7| Mus musculus BAC clone RP24-555P14 from chromosome 10, complete sequence
          Length = 170235

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     agctgtcgccgctgctggcg 116
              ||||||||||||||||||||
Sbjct: 168386 agctgtcgccgctgctggcg 168367
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>ref|NM_001036725.1| Arabidopsis thaliana CYCD5;1; cyclin-dependent protein kinase
           AT4G37630 (CYCD5;1) transcript variant AT4G37630.2 mRNA,
           complete cds
          Length = 1212

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  cgtcgtcttcatcgtcatcgccg 50
           ||||||||||||| |||||||||
Sbjct: 115 cgtcgtcttcatcatcatcgccg 137
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>ref|NM_119926.3| Arabidopsis thaliana CYCD5;1; cyclin-dependent protein kinase
           AT4G37630 (CYCD5;1) transcript variant AT4G37630.1 mRNA,
           complete cds
          Length = 1218

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  cgtcgtcttcatcgtcatcgccg 50
           ||||||||||||| |||||||||
Sbjct: 115 cgtcgtcttcatcatcatcgccg 137
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>gb|AY497610.2| Candida viswanathii strain CBS 4024 RNA polymerase II second
           largest subunit gene, partial cds
          Length = 702

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 409 cgtcgtcttcatcgtcatc 391
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>gb|BC056543.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E, mRNA (cDNA clone MGC:65995 IMAGE:6792825),
           complete cds
          Length = 1553

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 828 cgtcgtcttcatcgtcatc 810
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>gb|BC068403.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E, mRNA (cDNA clone MGC:85827 IMAGE:6962703),
           complete cds
          Length = 2486

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 844 cgtcgtcttcatcgtcatc 826
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>ref|NM_190415.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1734

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  ggaaggggacggcggcggg 86
           |||||||||||||||||||
Sbjct: 345 ggaaggggacggcggcggg 327
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                        
Query: 128    caggacagggctgtctaagtactacnaagggaagtcccagtc 169
              ||||| |||| |||| | ||||||| | ||||||||||||||
Sbjct: 128974 caggaaagggttgtccaggtactacgaggggaagtcccagtc 129015
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>ref|XM_586995.2| PREDICTED: Bos taurus similar to C/EBP-induced protein (LOC509931),
           mRNA
          Length = 3093

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 61  tgcagctggaaggggacgg 79
           |||||||||||||||||||
Sbjct: 260 tgcagctggaaggggacgg 242
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>ref|XM_593211.2| PREDICTED: Bos taurus similar to Smith-Magenis syndrome chromosome
           region, candidate 7 (LOC515229), mRNA
          Length = 1846

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 80  cggcgggccactctacgag 98
           |||||||||||||||||||
Sbjct: 300 cggcgggccactctacgag 318
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>ref|NM_213277.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E (anp32e), mRNA
          Length = 2486

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 844 cgtcgtcttcatcgtcatc 826
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>ref|XM_653423.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0911.2), mRNA
          Length = 1425

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 34  cttcatcgtcatcgccgtc 52
           |||||||||||||||||||
Sbjct: 376 cttcatcgtcatcgccgtc 358
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>ref|XM_451429.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A09823g predicted mRNA
          Length = 3960

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 643 cgtcgtcttcatcgtcatc 625
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 31       cgtcttcatcgtcatcgccgtcg 53
                |||| ||||||||||||||||||
Sbjct: 10702467 cgtcgtcatcgtcatcgccgtcg 10702445
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>ref|XM_755664.1| Ustilago maydis 521 hypothetical protein (UM04610.1) partial mRNA
          Length = 2112

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 30   tcgtcttcatcgtcatcgc 48
            |||||||||||||||||||
Sbjct: 1919 tcgtcttcatcgtcatcgc 1901
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>emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, complete sequence
          Length = 39211

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   cgtcgtcttcatcgtcatc 46
            |||||||||||||||||||
Sbjct: 1304 cgtcgtcttcatcgtcatc 1322
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>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 31     cgtcttcatcgtcatcgccgtcg 53
              |||| ||||||||||||||||||
Sbjct: 119381 cgtcgtcatcgtcatcgccgtcg 119359
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 103     cgccgctgctggcgcaccttccc 125
               ||||||| |||||||||||||||
Sbjct: 3307171 cgccgctcctggcgcaccttccc 3307149
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     cgtcgtcttcatcgtcatc 46
              |||||||||||||||||||
Sbjct: 859100 cgtcgtcttcatcgtcatc 859082
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>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87
          Length = 196339

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 28     cgtcgtcttcatcgtcatcgccg 50
              ||||||||||||| |||||||||
Sbjct: 173238 cgtcgtcttcatcatcatcgccg 173260
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>emb|CR394542.5| Zebrafish DNA sequence from clone DKEY-91I10 in linkage group 9,
             complete sequence
          Length = 193811

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    gagctgtcgccgctgctgg 114
             |||||||||||||||||||
Sbjct: 60591 gagctgtcgccgctgctgg 60573
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>gb|BC098881.1| Danio rerio acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E, mRNA (cDNA clone MGC:113940 IMAGE:2640018),
           complete cds
          Length = 2462

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 840 cgtcgtcttcatcgtcatc 822
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>emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, complete sequence
          Length = 181466

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    cgtcgtcttcatcgtcatc 46
             |||||||||||||||||||
Sbjct: 45759 cgtcgtcttcatcgtcatc 45741
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>gb|DQ397611.1| Cenarchaeum symbiosum clone C15A07, complete sequence
          Length = 43680

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 71    aggggacggcggcgggccactctacgagctg 101
             |||||||||||||| | || |||||||||||
Sbjct: 30087 aggggacggcggcgtggcagtctacgagctg 30057
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>gb|DQ397598.1| Cenarchaeum symbiosum clone C06E05, complete sequence
          Length = 42858

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 71    aggggacggcggcgggccactctacgagctg 101
             |||||||||||||| | || |||||||||||
Sbjct: 22934 aggggacggcggcgtggcagtctacgagctg 22904
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>gb|DQ397588.1| Cenarchaeum symbiosum clone C01F04, complete sequence
          Length = 37861

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 71    aggggacggcggcgggccactctacgagctg 101
             |||||||||||||| | || |||||||||||
Sbjct: 37181 aggggacggcggcgtggcagtctacgagctg 37151
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>gb|AF367052.1|AF367052 Lesquerella fendleri 3-ketoacyl-CoA synthase (KCS3) gene, complete
            cds
          Length = 4313

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 30   tcgtcttcatcgtcatcgc 48
            |||||||||||||||||||
Sbjct: 3888 tcgtcttcatcgtcatcgc 3906
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>dbj|AK221431.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL05-21-I17
          Length = 1615

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  cgtcgtcttcatcgtcatcgccg 50
           ||||||||||||| |||||||||
Sbjct: 189 cgtcgtcttcatcatcatcgccg 211
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>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone
             BACR07J20, complete sequence
          Length = 181771

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    cgtcgtcttcatcgtcatc 46
             |||||||||||||||||||
Sbjct: 24300 cgtcgtcttcatcgtcatc 24318
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 102    tcgccgctgctggcgcacc 120
              |||||||||||||||||||
Sbjct: 103152 tcgccgctgctggcgcacc 103134
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>ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of homeoboX family member
           (irx-1) (irx-1) mRNA, complete cds
          Length = 1150

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 671 cgtcgtcttcatcgtcatc 653
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                          
Query: 128      caggacagggctgtctaagtactacnaagggaagtcccagtc 169
                ||||| |||| |||| | ||||||| | ||||||||||||||
Sbjct: 25887442 caggaaagggttgtccaggtactacgaggggaagtcccagtc 25887483
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 31       cgtcttcatcgtcatcgccgtcg 53
                |||| ||||||||||||||||||
Sbjct: 10700568 cgtcgtcatcgtcatcgccgtcg 10700546
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 28       cgtcgtcttcatcgtcatcgccg 50
                ||||||| |||||||||||||||
Sbjct: 27815280 cgtcgtcgtcatcgtcatcgccg 27815258
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 68       ggaaggggacggcggcggg 86
                |||||||||||||||||||
Sbjct: 35393163 ggaaggggacggcggcggg 35393181
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>dbj|AB199751.1| Pinguicula acuminata genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S
           rRNA, partial and complete sequence
          Length = 653

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 114 gcgcaccttcccgtcagga 132
           |||||||||||||||||||
Sbjct: 70  gcgcaccttcccgtcagga 52
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>ref|XM_233085.3| PREDICTED: Rattus norvegicus similar to SET protein (Phosphatase 2A
           inhibitor I2PP2A) (I-2PP2A) (Template activating factor
           I) (TAF-I) (Liver regeneration related protein
           LRRGR00002) (Ab1-115) (LOC313310), mRNA
          Length = 1598

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  cgtcgtcttcatcgtcatc 46
           |||||||||||||||||||
Sbjct: 754 cgtcgtcttcatcgtcatc 736
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>ref|XM_344791.2| PREDICTED: Rattus norvegicus similar to SAM and SH3 domain containing
            protein 1 (Proline-glutamate repeat-containing protein)
            (LOC365037), mRNA
          Length = 7542

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  tcaggacagggctgtctaa 145
            |||||||||||||||||||
Sbjct: 3356 tcaggacagggctgtctaa 3338
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>gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone rp23-199g2, complete
              sequence
          Length = 214798

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 127    tcaggacagggctgtctaa 145
              |||||||||||||||||||
Sbjct: 129479 tcaggacagggctgtctaa 129497
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    ggaaggggacggcggcggg 86
             |||||||||||||||||||
Sbjct: 17112 ggaaggggacggcggcggg 17130
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>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0663F07
          Length = 159046

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 28     cgtcgtcttcatcgtcatcgccg 50
              ||||||| |||||||||||||||
Sbjct: 100613 cgtcgtcgtcatcgtcatcgccg 100591
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>dbj|BS000120.2| Pan troglodytes chromosome 22 clone:RP43-007D11, map 22, complete
              sequences
          Length = 219802

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 125    cgtcaggacagggctgtct 143
              |||||||||||||||||||
Sbjct: 214875 cgtcaggacagggctgtct 214857
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>dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G20, full
           insert sequence
          Length = 2018

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  ggaaggggacggcggcggg 86
           |||||||||||||||||||
Sbjct: 237 ggaaggggacggcggcggg 219
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>ref|XM_314998.2| Anopheles gambiae str. PEST ENSANGP00000002371
          (ENSANGG00000001987), partial mRNA
          Length = 261

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 75 gacggcggcgggccactct 93
          |||||||||||||||||||
Sbjct: 68 gacggcggcgggccactct 86
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>gb|AF216973.1|AF216973 Drosophila melanogaster l(2)01289 gene, complete cds, alternatively
             spliced products
          Length = 20796

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    cgtcgtcttcatcgtcatc 46
             |||||||||||||||||||
Sbjct: 10773 cgtcgtcttcatcgtcatc 10755
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>dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071C19, full
           insert sequence
          Length = 2011

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 68  ggaaggggacggcggcggg 86
           |||||||||||||||||||
Sbjct: 233 ggaaggggacggcggcggg 215
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 92      ctacgagctgtcgccgctg 110
               |||||||||||||||||||
Sbjct: 1804232 ctacgagctgtcgccgctg 1804214
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>dbj|AK067043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091B04, full
           insert sequence
          Length = 977

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                     
Query: 128 caggacagggctgtctaagtactacnaagggaagtcccagtc 169
           ||||| |||| |||| | ||||||| | ||||||||||||||
Sbjct: 470 caggaaagggttgtccaggtactacgaggggaagtcccagtc 511
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>emb|BX572633.7| Zebrafish DNA sequence from clone CH211-276P10 in linkage group 18,
              complete sequence
          Length = 184987

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     tgcgatgcagctggaaggg 74
              |||||||||||||||||||
Sbjct: 179635 tgcgatgcagctggaaggg 179653
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>gb|AC153569.4| Mus musculus 10 BAC RP23-225D5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 193135

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 127   tcaggacagggctgtctaa 145
             |||||||||||||||||||
Sbjct: 14729 tcaggacagggctgtctaa 14747
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>gb|AF084543.1|AF084543 Tupaia herpesvirus major DNA binding protein (DNBI), putative
            processing and transport protein (PRTP), glycoprotein B
            (gB), and DNA polymerase (DPOL) genes, complete cds
          Length = 13461

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 102  tcgccgctgctggcgcacc 120
            |||||||||||||||||||
Sbjct: 2219 tcgccgctgctggcgcacc 2237
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>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete
             sequence
          Length = 348873

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    cgtcgtcttcatcgtcatc 46
             |||||||||||||||||||
Sbjct: 60511 cgtcgtcttcatcgtcatc 60529
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>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F19F18 (ESSA project)
          Length = 91740

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 28    cgtcgtcttcatcgtcatcgccg 50
             ||||||||||||| |||||||||
Sbjct: 49816 cgtcgtcttcatcatcatcgccg 49838
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>gb|BC071305.1| Danio rerio ELL associated factor 2, mRNA (cDNA clone MGC:86600
           IMAGE:6891778), complete cds
          Length = 1985

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  gagctgtcgccgctgctgg 114
           |||||||||||||||||||
Sbjct: 701 gagctgtcgccgctgctgg 683
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>ref|NM_001002162.1| Danio rerio ELL associated factor 2 (eaf2), mRNA
          Length = 1985

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  gagctgtcgccgctgctgg 114
           |||||||||||||||||||
Sbjct: 701 gagctgtcgccgctgctgg 683


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,144,138
Number of Sequences: 3902068
Number of extensions: 1144138
Number of successful extensions: 113946
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113007
Number of HSP's gapped (non-prelim): 934
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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