>M1250_ARATH (P92555) Hypothetical mitochondrial protein AtMg01250 (ORF102)|
          Length = 122

 Score = 28.1 bits (61), Expect(2) = 1.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 340 VKVCRKAPRVSHLLFADXT 396
           ++V   +PR++HLLFAD T
Sbjct: 62  IRVSNNSPRINHLLFADDT 80



 Score = 21.9 bits (45), Expect(2) = 1.3
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +2

Query: 260 NGAILESFVPSRGLRXGTGWYPTILSLSRCAE 355
           NGA      PSRGLR G    P +  L  C E
Sbjct: 15  NGAPQGLVTPSRGLRQGDPLSPYLFIL--CTE 44

>LRC46_MACFA (Q4R747) Leucine-rich repeat-containing protein 46|
          Length = 321

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = -1

Query: 208 PTGERIPTXPLLAARSSSPHDXMPXTGQVXMHKSCXRGFSPFPSKIPDVSXCWLVHAGQE 29
           PT   +P  P +     S     P  G+  + ++     +  P+K P    C L+  G++
Sbjct: 231 PTLTNLPLLPGVPMAGDSSPSTTPGQGEETVPEAVSSPQASSPTKKP----CSLIPRGRQ 286

Query: 28  NRIWSRSG 5
           N +W R G
Sbjct: 287 NSLWGRKG 294

>T55BA_BRARE (Q32PR0) Transmembrane protein 55B-A (EC 3.1.3.-) (Type I|
           phosphatidylinositol 4,5-bisphosphate 4-phosphatase-A)
           (PtdIns-4,5-P2 4-Ptase I-A)
          Length = 270

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = +3

Query: 294 GGCDXARGGIPPY*ACQGVPKSPTSFPPVVRRXYSXILQGEPXTSY 431
           G      GG+ P  A  G P  P SFPP        +L  E    Y
Sbjct: 16  GALGSGNGGVSPGAASLGAPNKPQSFPPFPSSTQPPVLLSENPPPY 61

>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 26/90 (28%), Positives = 31/90 (34%)
 Frame = -1

Query: 352 GTP*QAQYGGIPPRAXSQPPRGHKRLQDGSIELHRVAXRGNACHYPNVPTGERIPTXPLL 173
           GT      G +PP    Q P G++  Q+GS    R         YP  PT    P  P  
Sbjct: 257 GTQMTGPLGPLPPMHSPQQP-GYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQP 315

Query: 172 AARSSSPHDXMPXTGQVXMHKSCXRGFSPF 83
                   D +P   QV       RG  PF
Sbjct: 316 LPPKRLDPDAIPSPIQVIEDDRNNRGTEPF 345

>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)|
           (hTFIIIB90) (B-related factor 1) (BRF-1)
          Length = 676

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 328 GGIPPRAXSQPPRGHKRLQDGSIELHRVAXRGNACHYPNVPTGERIPTXPLLAAR 164
           GG PPR  SQPP   +R     +   + A   N+   P   TG+R+   PLL+A+
Sbjct: 550 GGSPPRDDSQPP---ERASTKKLSRRKRATTRNSAD-PGTSTGKRL--RPLLSAQ 598

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
 Frame = -1

Query: 334 QYGG-IPPRAXSQPPRGHKRLQDGSIELHRVAXRGNACHYPNVPTGERIPTXPLLAARSS 158
           QYGG +PP   SQPP     L   S        RG      +VP+    P  P  A    
Sbjct: 29  QYGGYLPPPVTSQPPPSSIGLSPPSAPTTTPPSRG------HVPSPRHAP--PRHAYPPP 80

Query: 157 SPHDXMPXTGQVXMHKS---CXRGFSPFPSKI 71
           S     P  G    H+      RGF+P PS +
Sbjct: 81  SHGHLPPSVGGPPPHRGHLPPSRGFNPPPSPV 112

>BST1_MOUSE (Q64277) ADP-ribosyl cyclase 2 precursor (EC 3.2.2.5) (Cyclic|
           ADP-ribose hydrolase 2) (cADPr hydrolase 2) (Bone marrow
           stromal antigen 1) (BST-1) (BP-3 alloantigen) (Antigen
           BP3) (CD157 antigen)
          Length = 311

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 166 LRQAMXKLGFSHQWVHLDNDMRYLYXLLCEVQWSHPGVVCALAGAATRHGVVSHH 330
           L   +  LGF H  +   ND R +  L+C    +HP  +   A A+ R    S H
Sbjct: 239 LEDRLEALGFQHSCI---NDYRPVKFLMCVDHSTHPDCIMNSASASMRRESASLH 290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,573,250
Number of Sequences: 219361
Number of extensions: 1423333
Number of successful extensions: 3529
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3529
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)