ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd27p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470455.1| Oryza sativa (japonica cultivar-group), mRNA 123 7e-25
2ref|XM_470454.1| Oryza sativa (japonica cultivar-group), mRNA 123 7e-25
3gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 123 7e-25
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 123 7e-25
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
6dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
7dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
8ref|XM_741745.1| Aspergillus fumigatus Af293 hypothetical protei... 42 2.2
9gb|AC023483.5| Homo sapiens chromosome 3 clone RP11-453A3 map 3p... 42 2.2
10gb|AC034191.6| Homo sapiens chromosome 3 clone RP11-344L9 map 3p... 42 2.2
11gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, comple... 42 2.2
12gb|AC139337.5| Homo sapiens 3 BAC RP11-301H7 (Roswell Park Cance... 42 2.2
13gb|AC144547.6| Homo sapiens 12 BAC RP13-653N12 (Roswell Park Can... 42 2.2
14emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22,... 42 2.2
15gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, com... 42 2.2
16gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complet... 40 8.6
17gb|AC153878.11| Mus musculus 6 BAC RP23-229B22 (Roswell Park Can... 40 8.6
18gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, comp... 40 8.6
19gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, comple... 40 8.6
20gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 8.6
21emb|AL162615.13| Human DNA sequence from clone RP5-1041C10 on ch... 40 8.6
22emb|AL035700.13|HS75K24 Human DNA sequence from clone RP1-75K24 ... 40 8.6
23gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence 40 8.6
24gb|AY838862.1| Ninoe nigripes 28S ribosomal RNA gene, partial se... 40 8.6
25gb|AC116482.11| Mus musculus chromosome 8, clone RP23-423D8, com... 40 8.6
26gb|AC019185.8| Homo sapiens BAC clone RP11-299P7 from 2, complet... 40 8.6
27emb|AL135978.4|CNS01DVN Human chromosome 14 DNA sequence BAC R-1... 40 8.6
28emb|AL121673.41|HSA305P22 Human DNA sequence from clone RP11-305... 40 8.6
29gb|AC153922.6| Mus musculus 6 BAC RP23-81P16 (Roswell Park Cance... 40 8.6 
>ref|XM_470455.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3584

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 319  gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
            ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 2052 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 2111

                                                                        
Query: 379  actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
            |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 2112 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 2171

                                                                        
Query: 439  gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
            ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 2172 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 2231

                                                  
Query: 499  tttccagatttatgtgctggactgataacatctaaacc 536
            | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 2232 tctccggattcatgtgctggagtaataccatctgaacc 2269
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>ref|XM_470454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2474

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                       
Query: 319 gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
           ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 706 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 765

                                                                       
Query: 379 actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
           |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 766 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 825

                                                                       
Query: 439 gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
           ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 826 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 885

                                                 
Query: 499 tttccagatttatgtgctggactgataacatctaaacc 536
           | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 886 tctccggattcatgtgctggagtaataccatctgaacc 923
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>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Minus

                                                                         
Query: 319   gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
             ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 98943 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 98884

                                                                         
Query: 379   actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
             |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 98883 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 98824

                                                                         
Query: 439   gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
             ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 98823 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 98764

                                                   
Query: 499   tttccagatttatgtgctggactgataacatctaaacc 536
             | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 98763 tctccggattcatgtgctggagtaataccatctgaacc 98726
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Minus

                                                                            
Query: 319      gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
                ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 35701165 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 35701106

                                                                            
Query: 379      actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
                |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 35701105 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 35701046

                                                                            
Query: 439      gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
                ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 35701045 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 35700986

                                                      
Query: 499      tttccagatttatgtgctggactgataacatctaaacc 536
                | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 35700985 tctccggattcatgtgctggagtaataccatctgaacc 35700948
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Minus

                                                                            
Query: 319      gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
                ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 35791238 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 35791179

                                                                            
Query: 379      actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
                |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 35791178 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 35791119

                                                                            
Query: 439      gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
                ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 35791118 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 35791059

                                                      
Query: 499      tttccagatttatgtgctggactgataacatctaaacc 536
                | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 35791058 tctccggattcatgtgctggagtaataccatctgaacc 35791021
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>dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E22, full
            insert sequence
          Length = 3913

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 319  gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
            ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 2164 gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 2223

                                                                        
Query: 379  actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
            |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 2224 actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 2283

                                                                        
Query: 439  gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
            ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 2284 gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 2343

                                                  
Query: 499  tttccagatttatgtgctggactgataacatctaaacc 536
            | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 2344 tctccggattcatgtgctggagtaataccatctgaacc 2381
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>dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F11, full
            insert sequence
          Length = 2479

 Score =  123 bits (62), Expect = 7e-25
 Identities = 179/218 (82%)
 Strand = Plus / Plus

                                                                        
Query: 319  gactttccagagcacgttgtgaatctggtacagcaggacttccagttgaagaggccaatt 378
            ||||| |||||| | ||||| |||  ||||||||||  ||||||||||||||||||||||
Sbjct: 809  gacttcccagaggatgttgtcaattcggtacagcagagcttccagttgaagaggccaatt 868

                                                                        
Query: 379  actaatgctgtattcaagaaccagcaagttctgttggactttatgcacatggtctgcatt 438
            |||| ||| |||||| |||||  |||  | ||||||||||| ||||| ||||| ||  | 
Sbjct: 869  actagtgcagtattccagaacaggcacatcctgttggacttcatgcagatggtttgttta 928

                                                                        
Query: 439  gattctgcggtgaccacaaacaagccaatagcatggattgatgttcatggtaaacgcttc 498
            ||||||| | || ||| || ||||||||| || ||||| |||| |||||||||| |||||
Sbjct: 929  gattctgtgatggccataagcaagccaattgcttggatcgatgatcatggtaaatgcttc 988

                                                  
Query: 499  tttccagatttatgtgctggactgataacatctaaacc 536
            | ||| |||| |||||||||| | ||| ||||| ||||
Sbjct: 989  tctccggattcatgtgctggagtaataccatctgaacc 1026
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>ref|XM_741745.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g00920)
           partial mRNA
          Length = 1272

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 353 aggacttccagttgaagaggc 373
           |||||||||||||||||||||
Sbjct: 952 aggacttccagttgaagaggc 932
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>gb|AC023483.5| Homo sapiens chromosome 3 clone RP11-453A3 map 3p, complete sequence
          Length = 171051

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    aaatctgtaaagaaagtcaat 33
             |||||||||||||||||||||
Sbjct: 97058 aaatctgtaaagaaagtcaat 97078
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>gb|AC034191.6| Homo sapiens chromosome 3 clone RP11-344L9 map 3p, complete sequence
          Length = 172221

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    aaatctgtaaagaaagtcaat 33
             |||||||||||||||||||||
Sbjct: 32847 aaatctgtaaagaaagtcaat 32867
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>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence
          Length = 182372

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 494   gcttctttccagatttatgtg 514
             |||||||||||||||||||||
Sbjct: 66906 gcttctttccagatttatgtg 66926
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>gb|AC139337.5| Homo sapiens 3 BAC RP11-301H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142201

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    cttagttttagttgagctttctata 59
             |||||||||| ||||||||||||||
Sbjct: 53293 cttagttttacttgagctttctata 53269
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>gb|AC144547.6| Homo sapiens 12 BAC RP13-653N12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 59051

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 412   ttggactttatgcacatggtc 432
             |||||||||||||||||||||
Sbjct: 34622 ttggactttatgcacatggtc 34642
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>emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22, complete sequence
          Length = 252905

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 240    tattctggagtggtataagaa 260
              |||||||||||||||||||||
Sbjct: 199844 tattctggagtggtataagaa 199824
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>gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, complete sequence
          Length = 162391

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   tattctggagtggtataagaa 260
             |||||||||||||||||||||
Sbjct: 16002 tattctggagtggtataagaa 15982
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>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence
          Length = 193518

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    atgaaaatgttctgaaagctactg 115
             ||||||||||||| ||||||||||
Sbjct: 46933 atgaaaatgttcttaaagctactg 46910
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>gb|AC153878.11| Mus musculus 6 BAC RP23-229B22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 185647

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   gcaggacttccagttgaaga 370
             ||||||||||||||||||||
Sbjct: 24510 gcaggacttccagttgaaga 24491
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>gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, complete sequence
          Length = 154218

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    aacatctaaaccatctcagc 544
              ||||||||||||||||||||
Sbjct: 145768 aacatctaaaccatctcagc 145749
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>gb|AC007164.3| Homo sapiens BAC clone RP11-304A10 from 7, complete sequence
          Length = 89862

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 525 aacatctaaaccatctcagc 544
           ||||||||||||||||||||
Sbjct: 904 aacatctaaaccatctcagc 923
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 463    ccaatagcatggattgatgttcat 486
              |||||||| |||||||||||||||
Sbjct: 146039 ccaatagcttggattgatgttcat 146016
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>emb|AL162615.13| Human DNA sequence from clone RP5-1041C10 on chromosome 20 Contains the
             5' end of the B4GALT5 gene for UDP-Gal:betaGlcNAc beta
             1,4-galactosyltransferase polypeptide 5, b, the SNRPFP1
             gene for small nuclear ribonucleoprotein polypeptide F
             pseudogene 1, a cytokine-like nuclear factor n-pac (N-PAC)
             pseudogene, the 5' end of the SLC9A8 gene for solute
             carrier family 9 (sodium/hydrogen exchanger) isoform 8 and
             two CpG islands, complete sequence
          Length = 140092

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tgagtctgctgtgaaaagaa 151
             ||||||||||||||||||||
Sbjct: 21508 tgagtctgctgtgaaaagaa 21527
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>emb|AL035700.13|HS75K24 Human DNA sequence from clone RP1-75K24 on chromosome 6q13-15, complete
             sequence
          Length = 80279

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aggaagactggaatggggct 89
             ||||||||||||||||||||
Sbjct: 19753 aggaagactggaatggggct 19734
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>gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence
          Length = 169553

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gactggaatggggctggatg 94
              ||||||||||||||||||||
Sbjct: 146768 gactggaatggggctggatg 146787
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>gb|AY838862.1| Ninoe nigripes 28S ribosomal RNA gene, partial sequence
          Length = 4056

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  aggtctctcagcatgctgat 192
            ||||||||||||||||||||
Sbjct: 2907 aggtctctcagcatgctgat 2888
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>gb|AC116482.11| Mus musculus chromosome 8, clone RP23-423D8, complete sequence
          Length = 202027

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    atgttctgaaagctactgac 117
             ||||||||||||||||||||
Sbjct: 41536 atgttctgaaagctactgac 41555
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>gb|AC019185.8| Homo sapiens BAC clone RP11-299P7 from 2, complete sequence
          Length = 172349

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 485    atggtaaacgcttctttccagatt 508
              |||||||| |||||||||||||||
Sbjct: 108956 atggtaaatgcttctttccagatt 108979
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>emb|AL135978.4|CNS01DVN Human chromosome 14 DNA sequence BAC R-125H8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    gaatggggctggatgaaaat 99
             ||||||||||||||||||||
Sbjct: 30581 gaatggggctggatgaaaat 30600
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>emb|AL121673.41|HSA305P22 Human DNA sequence from clone RP11-305P22 on chromosome 20 Contains the
             3' end of the C20orf11 gene, the C20orf59 gene, the BHLHB4
             gene for basic helix-loop-helix domain containing (class
             B) 4, the C20orf51 gene, a novel gene and seven CpG
             islands, complete sequence
          Length = 151163

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   cattgattctgcggtgacca 454
             ||||||||||||||||||||
Sbjct: 74955 cattgattctgcggtgacca 74974
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>gb|AC153922.6| Mus musculus 6 BAC RP23-81P16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 234722

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gcaggacttccagttgaaga 370
              ||||||||||||||||||||
Sbjct: 111498 gcaggacttccagttgaaga 111479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,460,268
Number of Sequences: 3902068
Number of extensions: 6460268
Number of successful extensions: 148168
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148064
Number of HSP's gapped (non-prelim): 104
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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